Guide to the Human Genome
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Name: ZNRF1 Sequence: fasta or formatted (227aa) NCBI GI: 14150005
Description:

zinc and ring finger protein 1

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         19           2
 C cysteine            4.0          9           1
 D aspartate           6.2         14           2
 E glutamate           4.0          9           2
 F phenylalanine       3.1          7           1
 G glycine            14.1         32           4
 H histidine           4.4         10           2
 I isoleucine          3.1          7           1
 K lysine              2.6          6           1
 L leucine             6.6         15           2
 M methionine          3.5          8           1
 N asparagine          1.3          3           1
 P proline             7.5         17           3
 Q glutamine           1.3          3           1
 R arginine            5.7         13           1
 S serine             11.9         27           2
 T threonine           4.4         10           1
 V valine              4.0          9           1
 W tryptophan          0.9          2           1
 Y tyrosine            3.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc and ring finger protein 1 
ZNRF2                 0.372   zinc finger/RING finger 2 
RNF111                0.059   ring finger protein 111 
RNF11                 0.057   ring finger protein 11 
RNF165                0.057   ring finger protein 165 
LOC100290625          0.055   PREDICTED: hypothetical protein XP_002347002 
LOC100289630          0.055   PREDICTED: hypothetical protein XP_002342853 
RNF130                0.055   ring finger protein 130 
RNF150                0.050   ring finger protein 150 
RLIM                  0.048   ring finger protein, LIM domain interacting 
RLIM                  0.048   ring finger protein, LIM domain interacting 
RNF149                0.048   ring finger protein 149 
ZNRF4                 0.048   zinc and ring finger 4 
SYVN1                 0.048   synoviolin 1 isoform b 
SYVN1                 0.048   synoviolin 1 isoform a 
ZNRF3                 0.048   zinc and ring finger 3 
RNF43                 0.048   ring finger protein 43 
RNF128                0.046   ring finger protein 128 isoform 1 
RNF128                0.046   ring finger protein 128 isoform 2 
RNF44                 0.046   ring finger protein 44 
RNF148                0.044   ring finger protein 148 
RNF167                0.044   ring finger protein 167 
RNF6                  0.042   ring finger protein 6 
RNF6                  0.042   ring finger protein 6 
RNF6                  0.042   ring finger protein 6 
RNF133                0.042   ring finger protein 133 
RNF122                0.042   ring finger protein 122 
RNF13                 0.039   ring finger protein 13 
RNF13                 0.039   ring finger protein 13 
RNF38                 0.039   ring finger protein 38 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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