Guide to the Human Genome
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Name: WDR24 Sequence: fasta or formatted (790aa) NCBI GI: 14149987
Description:

WD repeat domain 24

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         60           2
 C cysteine            3.8         30           2
 D aspartate           6.6         52           1
 E glutamate           6.2         49           3
 F phenylalanine       4.1         32           2
 G glycine             6.7         53           4
 H histidine           4.8         38           2
 I isoleucine          2.3         18           2
 K lysine              3.5         28           1
 L leucine             8.9         70           2
 M methionine          2.7         21           2
 N asparagine          3.2         25           1
 P proline             4.9         39           2
 Q glutamine           3.0         24           1
 R arginine            6.8         54           2
 S serine              8.1         64           2
 T threonine           4.8         38           2
 V valine              8.2         65           3
 W tryptophan          2.0         16           1
 Y tyrosine            1.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 24 
PEX7                  0.038   peroxisomal biogenesis factor 7 
PWP1                  0.031   periodic tryptophan protein 1 
WDR33                 0.031   WD repeat domain 33 isoform 1 
KATNB1                0.031   katanin p80 subunit B 1 
WDR59                 0.030   WD repeat domain 59 
GRWD1                 0.025   glutamate-rich WD repeat containing 1 
WDR38                 0.025   WD repeat domain 38 
RBBP7                 0.025   retinoblastoma binding protein 7 
PAFAH1B1              0.024   platelet-activating factor acetylhydrolase, isoform I...
APAF1                 0.023   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.023   apoptotic peptidase activating factor 1 isoform b [Ho...
PRPF4                 0.022   PRP4 pre-mRNA processing factor 4 homolog 
GNB3                  0.021   guanine nucleotide-binding protein, beta-3 subunit [H...
TAF5                  0.021   TBP-associated factor 5 
GNB1                  0.021   guanine nucleotide-binding protein, beta-1 subunit [...
WDR51A                0.020   WD repeat domain 51A isoform 3 
WDR51A                0.020   WD repeat domain 51A isoform 2 
WDR51A                0.020   WD repeat domain 51A isoform 1 
RBBP4                 0.020   retinoblastoma binding protein 4 isoform c 
RBBP4                 0.020   retinoblastoma binding protein 4 isoform b 
RBBP4                 0.020   retinoblastoma binding protein 4 isoform a 
WDR17                 0.020   WD repeat domain 17 isoform 2 
WDR17                 0.020   WD repeat domain 17 isoform 1 
TBL1XR1               0.020   transducin (beta)-like 1 X-linked receptor 1 
FBXW7                 0.018   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.018   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.018   F-box and WD repeat domain containing 7 isoform 2 [H...
WDR5                  0.018   WD repeat domain 5 
WDR5                  0.018   WD repeat domain 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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