Guide to the Human Genome
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Name: WDR51A Sequence: fasta or formatted (359aa) NCBI GI: 239787760
Description:

WD repeat domain 51A isoform 2

Referenced in:

WD Repeat Proteins

Other entries for this name:
alt prot [407aa] WD repeat domain 51A isoform 1
alt prot [369aa] WD repeat domain 51A isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         26           3
 C cysteine            2.8         10           1
 D aspartate           6.1         22           2
 E glutamate           3.3         12           1
 F phenylalanine       4.5         16           1
 G glycine             6.1         22           2
 H histidine           5.3         19           1
 I isoleucine          2.8         10           1
 K lysine              5.3         19           1
 L leucine             7.8         28           2
 M methionine          2.5          9           1
 N asparagine          2.8         10           1
 P proline             3.6         13           2
 Q glutamine           3.9         14           2
 R arginine            5.3         19           1
 S serine             10.3         37           2
 T threonine           7.8         28           2
 V valine              8.6         31           1
 W tryptophan          1.9          7           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 51A isoform 2 
WDR51A                0.968   WD repeat domain 51A isoform 1 
WDR51A                0.859   WD repeat domain 51A isoform 3 
WDR51B                0.557   WD repeat domain 51B 
WDR69                 0.191   WD repeat domain 69 
PAFAH1B1              0.184   platelet-activating factor acetylhydrolase, isoform I...
WDR5B                 0.183   WD repeat domain 5B 
WDR5                  0.155   WD repeat domain 5 
WDR5                  0.155   WD repeat domain 5 
SPAG16                0.149   sperm associated antigen 16 isoform 1 
FBXW7                 0.147   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.147   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.147   F-box and WD repeat domain containing 7 isoform 2 [H...
NLE1                  0.147   Notchless gene homolog isoform a 
KATNB1                0.145   katanin p80 subunit B 1 
SNRNP40               0.144   WD repeat domain 57 (U5 snRNP specific) 
TAF5                  0.141   TBP-associated factor 5 
WDR38                 0.140   WD repeat domain 38 
GNB5                  0.140   guanine nucleotide-binding protein, beta-5 subunit is...
GNB5                  0.140   guanine nucleotide-binding protein, beta-5 subunit i...
PRPF19                0.128   PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom...
TBL1XR1               0.128   transducin (beta)-like 1 X-linked receptor 1 
ATG16L1               0.127   APG16 autophagy 16-like isoform 1 
ATG16L1               0.127   APG16 autophagy 16-like isoform 2 
TBL1Y                 0.127   transducin beta-like 1Y 
TBL1Y                 0.127   transducin beta-like 1Y 
TBL1Y                 0.127   transducin beta-like 1Y 
TBL1X                 0.126   transducin beta-like 1X isoform b 
TBL1X                 0.126   transducin beta-like 1X isoform b 
TBL1X                 0.126   transducin beta-like 1X isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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