Search of human proteins with 8923295

Search of human proteins with 8923295

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8923295 proline-rich nuclear receptor coactivator 2 [Homo
sapiens]
         (139 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8923295 proline-rich nuclear receptor coactivator 2 [Homo sap...   289   4e-79
gi|169160897 PREDICTED: similar to hCG1728885 [Homo sapiens]          284   2e-77
gi|169162148 PREDICTED: similar to hCG1728885 [Homo sapiens]          284   2e-77
gi|169161132 PREDICTED: hypothetical protein LOC100131261 [Homo ...   278   8e-76
gi|5802982 proline-rich nuclear receptor coactivator 1 [Homo sap...    86   1e-17
gi|10937869 survival of motor neuron 2, centromeric isoform d [H...    34   0.044
gi|13259527 survival of motor neuron 2, centromeric isoform a [H...    34   0.044
gi|4507091 survival of motor neuron 1, telomeric isoform d [Homo...    34   0.044
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]                      34   0.044
gi|109637784 GLIS family zinc finger 3 isoform a [Homo sapiens]        33   0.098
gi|217416343 fibrosin-like 1 [Homo sapiens]                            33   0.098
gi|109637782 GLIS family zinc finger 3 isoform b [Homo sapiens]        33   0.098
gi|24308111 FGFR1 oncogene partner 2 [Homo sapiens]                    32   0.17 
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa...    30   0.48 
gi|157278100 phosphonoformate immuno-associated protein 5 isofor...    30   0.48 
gi|24308394 hypothetical protein LOC140893 [Homo sapiens]              30   0.48 
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]         30   0.63 
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ...    29   1.1  
gi|103472003 forkhead box O4 [Homo sapiens]                            29   1.4  
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]    29   1.4  
gi|104526627 triadin [Homo sapiens]                                    29   1.4  
gi|66730423 hypothetical protein LOC389384 [Homo sapiens]              29   1.4  
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]      28   1.8  
gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]      28   1.8  
gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens]      28   1.8  
gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens]       28   1.8  
gi|13129048 oligonucleotide/oligosaccharide-binding fold contain...    28   1.8  
gi|39932583 hypothetical protein LOC55051 isoform 1 [Homo sapiens]     28   1.8  
gi|158508476 mbt domain containing 1 [Homo sapiens]                    28   1.8  
gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens]    28   2.4  

>gi|8923295 proline-rich nuclear receptor coactivator 2 [Homo
           sapiens]
          Length = 139

 Score =  289 bits (740), Expect = 4e-79
 Identities = 139/139 (100%), Positives = 139/139 (100%)

Query: 1   MGGGERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQ 60
           MGGGERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQ
Sbjct: 1   MGGGERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQ 60

Query: 61  NGGKNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFN 120
           NGGKNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFN
Sbjct: 61  NGGKNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFN 120

Query: 121 PSDKEIMTFQLKTLLKVQV 139
           PSDKEIMTFQLKTLLKVQV
Sbjct: 121 PSDKEIMTFQLKTLLKVQV 139


>gi|169160897 PREDICTED: similar to hCG1728885 [Homo sapiens]
          Length = 139

 Score =  284 bits (726), Expect = 2e-77
 Identities = 136/139 (97%), Positives = 137/139 (98%)

Query: 1   MGGGERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQ 60
           MGGGERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSA AWQAM+
Sbjct: 1   MGGGERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAGAWQAMK 60

Query: 61  NGGKNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFN 120
           NGGKNKNFPNNQSWNSSLSGP LLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFN
Sbjct: 61  NGGKNKNFPNNQSWNSSLSGPSLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFN 120

Query: 121 PSDKEIMTFQLKTLLKVQV 139
           PSDKEIMTFQLKTLLKVQV
Sbjct: 121 PSDKEIMTFQLKTLLKVQV 139


>gi|169162148 PREDICTED: similar to hCG1728885 [Homo sapiens]
          Length = 139

 Score =  284 bits (726), Expect = 2e-77
 Identities = 136/139 (97%), Positives = 137/139 (98%)

Query: 1   MGGGERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQ 60
           MGGGERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSA AWQAM+
Sbjct: 1   MGGGERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAGAWQAMK 60

Query: 61  NGGKNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFN 120
           NGGKNKNFPNNQSWNSSLSGP LLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFN
Sbjct: 61  NGGKNKNFPNNQSWNSSLSGPSLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFN 120

Query: 121 PSDKEIMTFQLKTLLKVQV 139
           PSDKEIMTFQLKTLLKVQV
Sbjct: 121 PSDKEIMTFQLKTLLKVQV 139


>gi|169161132 PREDICTED: hypothetical protein LOC100131261 [Homo
           sapiens]
          Length = 139

 Score =  278 bits (712), Expect = 8e-76
 Identities = 134/139 (96%), Positives = 135/139 (97%)

Query: 1   MGGGERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQ 60
           MGG ERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSA AWQAM+
Sbjct: 1   MGGRERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAGAWQAMK 60

Query: 61  NGGKNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFN 120
           NGGKNKNFPNNQSWNSSLSGP LLFKSQA QNYAGAKFSEPPSPSVLPKPPSHWVPVSFN
Sbjct: 61  NGGKNKNFPNNQSWNSSLSGPSLLFKSQAKQNYAGAKFSEPPSPSVLPKPPSHWVPVSFN 120

Query: 121 PSDKEIMTFQLKTLLKVQV 139
           PSDKEIMTFQLKTLLKVQV
Sbjct: 121 PSDKEIMTFQLKTLLKVQV 139


>gi|5802982 proline-rich nuclear receptor coactivator 1 [Homo
           sapiens]
          Length = 327

 Score = 85.5 bits (210), Expect = 1e-17
 Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 5/121 (4%)

Query: 21  QQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQNGGKNKNFPNNQSW-NSSLS 79
           Q ++NRQK+K      KI   K+   + +  S ++ +  +   + K F N ++  NS L 
Sbjct: 208 QPKINRQKSKYNLPLTKITSAKRNENNFWQDSVSSDRIQKQ--EKKPFKNTENIKNSHLK 265

Query: 80  GPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWV--PVSFNPSDKEIMTFQLKTLLKV 137
               L +    +NYAGAKFS+PPSPSVLPKPPSHW+   V  +  ++E+M   LKTLLKV
Sbjct: 266 KSAFLTEVSQKENYAGAKFSDPPSPSVLPKPPSHWMGSTVENSNQNRELMAVHLKTLLKV 325

Query: 138 Q 138
           Q
Sbjct: 326 Q 326


>gi|10937869 survival of motor neuron 2, centromeric isoform d [Homo
           sapiens]
          Length = 294

 Score = 33.9 bits (76), Expect = 0.044
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)

Query: 62  GGKNKNF-PNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSH----WVP 116
           G K+ N  P +  WNS L  P  +   +      G KF+ PP P   P PP H    W+P
Sbjct: 177 GNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPP--PPPPPHLLSCWLP 234


>gi|13259527 survival of motor neuron 2, centromeric isoform a [Homo
           sapiens]
          Length = 282

 Score = 33.9 bits (76), Expect = 0.044
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)

Query: 62  GGKNKNF-PNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSH----WVP 116
           G K+ N  P +  WNS L  P  +   +      G KF+ PP P   P PP H    W+P
Sbjct: 177 GNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPP--PPPPPHLLSCWLP 234


>gi|4507091 survival of motor neuron 1, telomeric isoform d [Homo
           sapiens]
          Length = 294

 Score = 33.9 bits (76), Expect = 0.044
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)

Query: 62  GGKNKNF-PNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSH----WVP 116
           G K+ N  P +  WNS L  P  +   +      G KF+ PP P   P PP H    W+P
Sbjct: 177 GNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPP--PPPPPHLLSCWLP 234


>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
          Length = 547

 Score = 33.9 bits (76), Expect = 0.044
 Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 12/110 (10%)

Query: 4   GERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGH--GYNSSAAAWQAMQN 61
           G  + +P P+    S   + +++Q+ K    Q      K++ G+  G N     WQ    
Sbjct: 332 GYHFELPGPRMSMTSILTRNMDKQRQKRLQEQ------KQQEGYDGGPNLRTKVWQRGTP 385

Query: 62  GGKNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPP 111
                  P +  W+S    P+L  K Q  ++   +  + PP P   P PP
Sbjct: 386 SSSPYVSPRHSPWSS----PKLPKKVQTVRSRPLSPVATPPPPPPPPPPP 431


>gi|109637784 GLIS family zinc finger 3 isoform a [Homo sapiens]
          Length = 930

 Score = 32.7 bits (73), Expect = 0.098
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 57  QAMQNGGKNKNFPNNQSWNSSLSGPRL----LFKSQANQNYAGAKFSEPPSPSVLPKPPS 112
           Q +++GG      N+      L GP      LFK++  + + G+    PP+P + P PP 
Sbjct: 396 QQLEHGGLQPGLVNHMVVQHGLPGPDSQSAGLFKTERLEEFPGSTVDLPPAPPLPPLPPP 455

Query: 113 HWVPVSFN 120
              P  ++
Sbjct: 456 PGPPPPYH 463


>gi|217416343 fibrosin-like 1 [Homo sapiens]
          Length = 1045

 Score = 32.7 bits (73), Expect = 0.098
 Identities = 19/61 (31%), Positives = 30/61 (49%)

Query: 78  LSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFNPSDKEIMTFQLKTLLKV 137
           LS   L  +SQA      A F+ PP+    P  P+  + +  +P+D E++  +L T   V
Sbjct: 360 LSTSHLALRSQAQHQLHAAMFAAPPTLPPPPALPASSLVLPGHPADHELLRQELNTRFLV 419

Query: 138 Q 138
           Q
Sbjct: 420 Q 420


>gi|109637782 GLIS family zinc finger 3 isoform b [Homo sapiens]
          Length = 775

 Score = 32.7 bits (73), Expect = 0.098
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 57  QAMQNGGKNKNFPNNQSWNSSLSGPRL----LFKSQANQNYAGAKFSEPPSPSVLPKPPS 112
           Q +++GG      N+      L GP      LFK++  + + G+    PP+P + P PP 
Sbjct: 241 QQLEHGGLQPGLVNHMVVQHGLPGPDSQSAGLFKTERLEEFPGSTVDLPPAPPLPPLPPP 300

Query: 113 HWVPVSFN 120
              P  ++
Sbjct: 301 PGPPPPYH 308


>gi|24308111 FGFR1 oncogene partner 2 [Homo sapiens]
          Length = 253

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 15/46 (32%), Positives = 28/46 (60%)

Query: 28  KTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQNGGKNKNFPNNQS 73
           K KEQ+S++ +VH+ K  G   ++S    +A Q+G + ++   NQ+
Sbjct: 125 KLKEQHSKIDMVHRNKSEGFFLDASRHILEAPQHGLERRHLEANQN 170


>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
           sapiens]
          Length = 2881

 Score = 30.4 bits (67), Expect = 0.48
 Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 1   MGGGERYNIP-APQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAM 59
           + G  R N+   PQ  N S +QQ ++ Q+  + ++     HK      G  +  +     
Sbjct: 202 VSGPHRVNVNHPPQMTNASNSQQSISMQQFSQTSNPSAHFHKCSSHQEGNFNGPSPNMTS 261

Query: 60  QNGGKNKNFPNNQSWNSSLSGPRLLFKSQA 89
            +   ++ F ++ S++S+   P  L +S A
Sbjct: 262 CSVSNSQQFSSHYSFSSNHISPNSLLQSSA 291


>gi|157278100 phosphonoformate immuno-associated protein 5 isoform 1
           [Homo sapiens]
          Length = 752

 Score = 30.4 bits (67), Expect = 0.48
 Identities = 13/39 (33%), Positives = 24/39 (61%)

Query: 3   GGERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHK 41
           G +R  +       +SK +Q+ NR++ K+QNSQ +I+ +
Sbjct: 134 GRQRERVLKKTGHRLSKTKQKRNRKRNKKQNSQNRIMEE 172


>gi|24308394 hypothetical protein LOC140893 [Homo sapiens]
          Length = 664

 Score = 30.4 bits (67), Expect = 0.48
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 7/78 (8%)

Query: 57  QAMQNGGKNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEP---PSPSVLPKPPSH 113
           QA+ NG K    P  +  ++ +   R L  SQ + +  G+   E    P P   P+PP H
Sbjct: 489 QALSNGTKGTRVPEQEEASTPMDPSRPLPGSQLSLSSPGSTEDEDTGRPLPPPHPQPPPH 548

Query: 114 WVPVSFN----PSDKEIM 127
             P   +    PS  E++
Sbjct: 549 PQPPDLDGHPEPSKAEVL 566


>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
          Length = 953

 Score = 30.0 bits (66), Expect = 0.63
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 11/85 (12%)

Query: 26  RQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQNGGKNKNFPNNQSWNSSLSGPRLLF 85
           R+KT   ++      +   R   Y+ S ++ ++        ++ +  S +SS SG R   
Sbjct: 541 RRKTSASSASASNSSRSSSRSSSYSGSGSS-RSRSRSSSYSSYSSRSSRHSSFSGSRSRS 599

Query: 86  KSQANQNYAGAKFSEPPSPSVLPKP 110
           +S          FS  PSPS  P P
Sbjct: 600 RS----------FSSSPSPSPTPSP 614


>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
           containing B [Homo sapiens]
          Length = 546

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 14/60 (23%), Positives = 33/60 (55%)

Query: 13  QSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQNGGKNKNFPNNQ 72
           +SR+ S+N  + +R ++KE++S+ K   K+K      + S     +++   K ++ P+ +
Sbjct: 436 RSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKE 495


>gi|103472003 forkhead box O4 [Homo sapiens]
          Length = 505

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 11/81 (13%)

Query: 39  VHKKKERGHGYNSSAAAWQAMQ-NGGKNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAK 97
           +H K  + H   +  ++W  +   GGK+   P  ++ +   S   L  +S+A +      
Sbjct: 160 LHSKFIKVHNEATGKSSWWMLNPEGGKSGKAPRRRAASMDSSSKLLRGRSKAPKK----- 214

Query: 98  FSEPPSPSVLPKPPSHWVPVS 118
                 PSVLP PP    P S
Sbjct: 215 -----KPSVLPAPPEGATPTS 230


>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
          Length = 1462

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 23/114 (20%)

Query: 14  SRNVSKNQQQLNRQKT-----KEQNSQMKIVHKKKERGHGYNSSAAAWQA---------- 58
           S + S + +Q + Q T     KE+  QM+  H K+E+  G   S +  +           
Sbjct: 804 SLDYSSDSEQSSVQATQSAQEKEKQGQMERTHNKQEKNRGEEKSKSERECPHSKKRTLKE 863

Query: 59  -----MQNGG--KNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPS 105
                ++NG   K KN+  ++ W+S  +  R + K+  N ++  +   E  + S
Sbjct: 864 NLSDHLRNGSKPKRKNYAGSK-WDSESNSERDVTKNSKNDSHPSSDKEEGEATS 916


>gi|104526627 triadin [Homo sapiens]
          Length = 729

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 5   ERYNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERG 46
           ++  I  P  R    ++ +  +Q+  E+  Q K+ HK+KE+G
Sbjct: 129 DKGEIDEPPLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKG 170


>gi|66730423 hypothetical protein LOC389384 [Homo sapiens]
          Length = 652

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 7/115 (6%)

Query: 10  PAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQNGGKNKNFP 69
           PAP  R   K+Q++    K   + +  K   ++ +RG    SS  AW   ++        
Sbjct: 278 PAPAVRK--KSQEKKTSLKRTSKTNPKKHGSEEAKRGAADVSSPEAWPPKKSSFLPLCVS 335

Query: 70  NNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWVPVSFNPSDK 124
            ++   SS  G       +A    AGA     P PSVLP P     P    P D+
Sbjct: 336 GHRPSISSSYGLEEPKVQEAPSTEAGA-----PGPSVLPTPSESQEPGEELPLDR 385


>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
          Length = 1312

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 26/131 (19%)

Query: 13  QSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQ------------ 60
           + R  ++ +Q+  R++ +EQ  Q + + ++ ++ H Y  S    Q  Q            
Sbjct: 440 EERRQAEREQEYKRKQLEEQR-QSERLQRQLQQEHAYLKSLQQQQQQQQLQKQQQQQLLP 498

Query: 61  -------NGGKNKNFPNNQSWNSSLSGPRLLFKSQAN---QNYAGAKFSEPPSPSVLPKP 110
                  + G+  N  +  +W   +     + K Q +   ++  G+   EPP P   P P
Sbjct: 499 GDRKPLYHYGRGMNPADKPAWAREVEERTRMNKQQNSPLAKSKPGSTGPEPPIPQASPGP 558

Query: 111 PSHWVPVSFNP 121
           P    P+S  P
Sbjct: 559 PG---PLSQTP 566


>gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]
          Length = 1303

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 26/131 (19%)

Query: 13  QSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQ------------ 60
           + R  ++ +Q+  R++ +EQ  Q + + ++ ++ H Y  S    Q  Q            
Sbjct: 440 EERRQAEREQEYKRKQLEEQR-QSERLQRQLQQEHAYLKSLQQQQQQQQLQKQQQQQLLP 498

Query: 61  -------NGGKNKNFPNNQSWNSSLSGPRLLFKSQAN---QNYAGAKFSEPPSPSVLPKP 110
                  + G+  N  +  +W   +     + K Q +   ++  G+   EPP P   P P
Sbjct: 499 GDRKPLYHYGRGMNPADKPAWAREVEERTRMNKQQNSPLAKSKPGSTGPEPPIPQASPGP 558

Query: 111 PSHWVPVSFNP 121
           P    P+S  P
Sbjct: 559 PG---PLSQTP 566


>gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens]
          Length = 1332

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 26/131 (19%)

Query: 13  QSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQ------------ 60
           + R  ++ +Q+  R++ +EQ  Q + + ++ ++ H Y  S    Q  Q            
Sbjct: 440 EERRQAEREQEYKRKQLEEQR-QSERLQRQLQQEHAYLKSLQQQQQQQQLQKQQQQQLLP 498

Query: 61  -------NGGKNKNFPNNQSWNSSLSGPRLLFKSQAN---QNYAGAKFSEPPSPSVLPKP 110
                  + G+  N  +  +W   +     + K Q +   ++  G+   EPP P   P P
Sbjct: 499 GDRKPLYHYGRGMNPADKPAWAREVEERTRMNKQQNSPLAKSKPGSTGPEPPIPQASPGP 558

Query: 111 PSHWVPVSFNP 121
           P    P+S  P
Sbjct: 559 PG---PLSQTP 566


>gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens]
          Length = 1295

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 26/131 (19%)

Query: 13  QSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQ------------ 60
           + R  ++ +Q+  R++ +EQ  Q + + ++ ++ H Y  S    Q  Q            
Sbjct: 440 EERRQAEREQEYKRKQLEEQR-QSERLQRQLQQEHAYLKSLQQQQQQQQLQKQQQQQLLP 498

Query: 61  -------NGGKNKNFPNNQSWNSSLSGPRLLFKSQAN---QNYAGAKFSEPPSPSVLPKP 110
                  + G+  N  +  +W   +     + K Q +   ++  G+   EPP P   P P
Sbjct: 499 GDRKPLYHYGRGMNPADKPAWAREVEERTRMNKQQNSPLAKSKPGSTGPEPPIPQASPGP 558

Query: 111 PSHWVPVSFNP 121
           P    P+S  P
Sbjct: 559 PG---PLSQTP 566


>gi|13129048 oligonucleotide/oligosaccharide-binding fold containing
           2B [Homo sapiens]
          Length = 211

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 9/63 (14%)

Query: 49  YNSSAAAWQAMQNGGKNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAKFSEPPSPSVLP 108
           Y++  A  +A+QN        +N S +   +GP     +  NQN  G   S PP P   P
Sbjct: 115 YSTQQAPNKAVQND-------SNPSASQPTTGPSAASPASENQN--GNGLSAPPGPGGGP 165

Query: 109 KPP 111
            PP
Sbjct: 166 HPP 168


>gi|39932583 hypothetical protein LOC55051 isoform 1 [Homo sapiens]
          Length = 1164

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 16  NVSKNQQQLNRQKTKEQNSQMKIVHKKK-ERGHGYNSSA 53
           + +K  +Q +R+K KE+  + K  H KK +R HG +SS+
Sbjct: 70  DTNKKLKQTSRKKKKEKKKKRKHQHHKKTKRKHGPSSSS 108


>gi|158508476 mbt domain containing 1 [Homo sapiens]
          Length = 628

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 7   YNIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKK------KER---GHGYNSSAAAWQ 57
           Y +  P S++  +NQ   ++QK K ++ Q K  HKK      KE    G  YN    A  
Sbjct: 555 YQLQPPASQSSRENQSASSKQKKKAKSQQYK-GHKKMTTLQLKEELLDGEDYNFLQGASD 613

Query: 58  AMQNGGKN 65
              NG  N
Sbjct: 614 QESNGSAN 621


>gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens]
          Length = 1173

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 8   NIPAPQSRNVSKNQQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQNGGKNKN 67
           NI  P S ++ K  + L ++    +  +   +H+  E+         A    Q      +
Sbjct: 148 NIYVPSSYHLPKEMKSLKKKHRSPERRKSLFIHENNEKNDRDRGKTNADSKKQTTVAEAD 207

Query: 68  FPNNQSWNSSLSGPRLLFKSQANQNYAGAKF 98
             NN S   SLS    L +    ++  GAKF
Sbjct: 208 IFNNSS--RSLSSRSSLSRHHPEESPLGAKF 236



 Score = 26.2 bits (56), Expect = 9.1
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 30  KEQNSQMKIVHKKK-----ERGH--GYNSSAAAWQAMQNGGKNKNFPNNQSWNS 76
           +EQ  Q  I+  K      E GH     SS+ +W+    G K   FP  +  NS
Sbjct: 287 QEQRKQNDIIPGKNNLSNVENGHLSRKRSSSDSWEPTSAGSKQNKFPEKRKRNS 340


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.124    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,488,090
Number of Sequences: 37866
Number of extensions: 302948
Number of successful extensions: 1443
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1379
Number of HSP's gapped (non-prelim): 121
length of query: 139
length of database: 18,247,518
effective HSP length: 92
effective length of query: 47
effective length of database: 14,763,846
effective search space: 693900762
effective search space used: 693900762
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.