NDE1 36984

Name: NDE1	Sequence: fasta or formatted (335aa)		NCBI GI: 8923110
Description: nuclear distribution gene E homolog 1		Referenced in: Dynein and Dynactin
Other entries for this name: alt mRNA [335aa] nuclear distribution gene E homolog 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 24 2 C cysteine 0.9 3 1 D aspartate 6.0 20 2 E glutamate 11.9 40 4 F phenylalanine 1.8 6 1 G glycine 5.4 18 2 H histidine 0.6 2 1 I isoleucine 3.0 10 1 K lysine 5.4 18 1 L leucine 10.1 34 2 M methionine 1.5 5 1 N asparagine 4.2 14 2 P proline 3.9 13 1 Q glutamine 6.3 21 2 R arginine 9.3 31 2 S serine 10.7 36 4 T threonine 6.6 22 2 V valine 3.0 10 1 W tryptophan 0.6 2 1 Y tyrosine 1.8 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear distribution gene E homolog 1 NDE1 1.000 nuclear distribution gene E homolog 1 NDEL1 0.499 nudE nuclear distribution gene E homolog (A. nidulan... NDEL1 0.499 nudE nuclear distribution gene E homolog (A. nidulan... MYH10 0.059 myosin, heavy polypeptide 10, non-muscle TPR 0.056 nuclear pore complex-associated protein TPR CGNL1 0.054 cingulin-like 1 RBM25 0.054 RNA binding motif protein 25 TRIP11 0.052 thyroid hormone receptor interactor 11 MYH9 0.049 myosin, heavy polypeptide 9, non-muscle DEF6 0.049 differentially expressed in FDCP 6 homolog LOC283685 0.049 PREDICTED: golgi autoantigen, golgin subfamily a-li... ROCK2 0.048 Rho-associated, coiled-coil containing protein kinas... CIT 0.048 citron SYCP1 0.046 synaptonemal complex protein 1 MYH2 0.046 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.046 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH6 0.046 myosin heavy chain 6 MYH8 0.046 myosin, heavy chain 8, skeletal muscle, perinatal [... MYH7 0.045 myosin, heavy chain 7, cardiac muscle, beta LOC400352 0.045 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.045 PREDICTED: similar to Putative golgin subfamily A m... LOC283685 0.045 PREDICTED: golgi autoantigen, golgin subfamily a-li... INCENP 0.045 inner centromere protein antigens 135/155kDa isofor... INCENP 0.045 inner centromere protein antigens 135/155kDa isofor... MYH11 0.045 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.045 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.045 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.045 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH1 0.045 myosin, heavy chain 1, skeletal muscle, adult [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.