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Search of human proteins with 8922328
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922328 RNA binding motif protein 22 [Homo sapiens]
(420 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922328 RNA binding motif protein 22 [Homo sapiens] 891 0.0
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 68 2e-11
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 68 2e-11
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 68 2e-11
gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 66 5e-11
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens] 64 2e-10
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens] 64 2e-10
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 55 1e-07
gi|7706501 WW domain binding protein 11 [Homo sapiens] 55 2e-07
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 54 3e-07
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 52 8e-07
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 52 8e-07
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 52 1e-06
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 52 1e-06
gi|153792074 proline rich 12 [Homo sapiens] 52 1e-06
gi|71164894 trinucleotide repeat containing 4 [Homo sapiens] 52 1e-06
gi|206597502 NESH protein isoform 2 [Homo sapiens] 52 1e-06
gi|7705981 NESH protein isoform 1 [Homo sapiens] 52 1e-06
gi|11386183 WAS protein family, member 2 [Homo sapiens] 51 2e-06
gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo s... 51 2e-06
gi|56549694 enabled homolog isoform a [Homo sapiens] 50 5e-06
gi|39930375 enabled homolog isoform b [Homo sapiens] 50 5e-06
gi|18959210 WIRE protein [Homo sapiens] 50 5e-06
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap... 50 5e-06
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 49 7e-06
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 49 7e-06
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap... 49 9e-06
gi|33356148 formin-like 1 [Homo sapiens] 49 1e-05
gi|157168329 formin 1 [Homo sapiens] 48 1e-05
gi|160707881 formin 2 [Homo sapiens] 48 1e-05
>gi|8922328 RNA binding motif protein 22 [Homo sapiens]
Length = 420
Score = 891 bits (2303), Expect = 0.0
Identities = 420/420 (100%), Positives = 420/420 (100%)
Query: 1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG 60
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
Sbjct: 1 MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG 60
Query: 61 VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN 120
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
Sbjct: 61 VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN 120
Query: 121 MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP 180
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
Sbjct: 121 MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP 180
Query: 181 YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG 240
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
Sbjct: 181 YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG 240
Query: 241 DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV 300
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
Sbjct: 241 DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV 300
Query: 301 KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV 360
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
Sbjct: 301 KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV 360
Query: 361 VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP 420
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
Sbjct: 361 VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP 420
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 67.8 bits (164), Expect = 2e-11
Identities = 70/251 (27%), Positives = 100/251 (39%), Gaps = 67/251 (26%)
Query: 215 KRASTMPRLDPPEDKTI-TTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQ 273
+R +P++ P TTL+VG L T+ D+ + +FG I +I ++ + CA+I
Sbjct: 490 RRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIV 549
Query: 274 FATRQAAEVAAEK-SFNKLIVNGRRLNVKWGRSQAARGKEKE------------------ 314
RQ A A +K S VN + + + W ++ + K+
Sbjct: 550 MVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKP 609
Query: 315 -------KDGTTDS--------GI-----------------KLEPVPGLPGALP---PPP 339
+ G DS GI EPV +P LP PP
Sbjct: 610 EELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPI 669
Query: 340 AAEEEASANYFNLPP--SGPPAVVNIALPPPPGIAPP---PPPGFGPHMFHPMGPPPPFM 394
+ +PP GPP V + PP PP PPPGFGP + P PPPPF+
Sbjct: 670 PVPAPITVPPPQVPPHQPGPPVVGAL---QPPAFTPPLGIPPPGFGPGV-PPPPPPPPFL 725
Query: 395 RAPG--PIHYP 403
R PG P+H P
Sbjct: 726 R-PGFNPMHLP 735
Score = 39.7 bits (91), Expect = 0.005
Identities = 41/143 (28%), Positives = 49/143 (34%), Gaps = 33/143 (23%)
Query: 308 ARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVN----- 362
ARG + D G + P P LP PP + + + P GP +
Sbjct: 770 ARGNAESGDSVKMYGSAVPPAA--PTNLPTPPVTQPVSLLGTQGVAP-GPVIGLQAPSTG 826
Query: 363 --------IALPPPPGIAPP--------PPPGFGPHMFH---PMG------PPPPFMRAP 397
I L PPG+ PP PP PHM H P G PPP M+ P
Sbjct: 827 LLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGP 886
Query: 398 GPIHYPSQDPQRMGAHAGKHSSP 420
P H P P M G P
Sbjct: 887 FPPHGPFVRPGGMPGLGGPGPGP 909
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 67.8 bits (164), Expect = 2e-11
Identities = 70/251 (27%), Positives = 100/251 (39%), Gaps = 67/251 (26%)
Query: 215 KRASTMPRLDPPEDKTI-TTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQ 273
+R +P++ P TTL+VG L T+ D+ + +FG I +I ++ + CA+I
Sbjct: 475 RRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIV 534
Query: 274 FATRQAAEVAAEK-SFNKLIVNGRRLNVKWGRSQAARGKEKE------------------ 314
RQ A A +K S VN + + + W ++ + K+
Sbjct: 535 MVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKP 594
Query: 315 -------KDGTTDS--------GI-----------------KLEPVPGLPGALP---PPP 339
+ G DS GI EPV +P LP PP
Sbjct: 595 EELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPI 654
Query: 340 AAEEEASANYFNLPP--SGPPAVVNIALPPPPGIAPP---PPPGFGPHMFHPMGPPPPFM 394
+ +PP GPP V + PP PP PPPGFGP + P PPPPF+
Sbjct: 655 PVPAPITVPPPQVPPHQPGPPVVGAL---QPPAFTPPLGIPPPGFGPGV-PPPPPPPPFL 710
Query: 395 RAPG--PIHYP 403
R PG P+H P
Sbjct: 711 R-PGFNPMHLP 720
Score = 39.7 bits (91), Expect = 0.005
Identities = 41/143 (28%), Positives = 49/143 (34%), Gaps = 33/143 (23%)
Query: 308 ARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVN----- 362
ARG + D G + P P LP PP + + + P GP +
Sbjct: 777 ARGNAESGDSVKMYGSAVPPAA--PTNLPTPPVTQPVSLLGTQGVAP-GPVIGLQAPSTG 833
Query: 363 --------IALPPPPGIAPP--------PPPGFGPHMFH---PMG------PPPPFMRAP 397
I L PPG+ PP PP PHM H P G PPP M+ P
Sbjct: 834 LLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGP 893
Query: 398 GPIHYPSQDPQRMGAHAGKHSSP 420
P H P P M G P
Sbjct: 894 FPPHGPFVRPGGMPGLGGPGPGP 916
Score = 31.2 bits (69), Expect = 1.8
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 12/75 (16%)
Query: 326 EPVPGLPGALPPP----PAAEEEASANYFNLPPSGPPAVVNIALPP---PPG-IAPPPPP 377
+P P + GAL PP P PP PP + P PPG + P PPP
Sbjct: 671 QPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPP 730
Query: 378 GFGPHMFHPMGPPPP 392
P P+ PPP
Sbjct: 731 PITP----PVSIPPP 741
Score = 31.2 bits (69), Expect = 1.8
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 329 PGLPGALPPPPAAEEEASANYFNLPPS----GPPAVVNIALPPPPGIAPPPPP 377
PG+P PPPP N +LPP GPP + PP I PP P
Sbjct: 698 PGVPPPPPPPPFLRP--GFNPMHLPPGFLPPGPPPPIT----PPVSIPPPHTP 744
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 67.8 bits (164), Expect = 2e-11
Identities = 70/251 (27%), Positives = 100/251 (39%), Gaps = 67/251 (26%)
Query: 215 KRASTMPRLDPPEDKTI-TTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQ 273
+R +P++ P TTL+VG L T+ D+ + +FG I +I ++ + CA+I
Sbjct: 490 RRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIV 549
Query: 274 FATRQAAEVAAEK-SFNKLIVNGRRLNVKWGRSQAARGKEKE------------------ 314
RQ A A +K S VN + + + W ++ + K+
Sbjct: 550 MVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKP 609
Query: 315 -------KDGTTDS--------GI-----------------KLEPVPGLPGALP---PPP 339
+ G DS GI EPV +P LP PP
Sbjct: 610 EELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPI 669
Query: 340 AAEEEASANYFNLPP--SGPPAVVNIALPPPPGIAPP---PPPGFGPHMFHPMGPPPPFM 394
+ +PP GPP V + PP PP PPPGFGP + P PPPPF+
Sbjct: 670 PVPAPITVPPPQVPPHQPGPPVVGAL---QPPAFTPPLGIPPPGFGPGV-PPPPPPPPFL 725
Query: 395 RAPG--PIHYP 403
R PG P+H P
Sbjct: 726 R-PGFNPMHLP 735
Score = 39.7 bits (91), Expect = 0.005
Identities = 41/143 (28%), Positives = 49/143 (34%), Gaps = 33/143 (23%)
Query: 308 ARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVN----- 362
ARG + D G + P P LP PP + + + P GP +
Sbjct: 792 ARGNAESGDSVKMYGSAVPPAA--PTNLPTPPVTQPVSLLGTQGVAP-GPVIGLQAPSTG 848
Query: 363 --------IALPPPPGIAPP--------PPPGFGPHMFH---PMG------PPPPFMRAP 397
I L PPG+ PP PP PHM H P G PPP M+ P
Sbjct: 849 LLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGP 908
Query: 398 GPIHYPSQDPQRMGAHAGKHSSP 420
P H P P M G P
Sbjct: 909 FPPHGPFVRPGGMPGLGGPGPGP 931
Score = 31.2 bits (69), Expect = 1.8
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 12/75 (16%)
Query: 326 EPVPGLPGALPPP----PAAEEEASANYFNLPPSGPPAVVNIALPP---PPG-IAPPPPP 377
+P P + GAL PP P PP PP + P PPG + P PPP
Sbjct: 686 QPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPP 745
Query: 378 GFGPHMFHPMGPPPP 392
P P+ PPP
Sbjct: 746 PITP----PVSIPPP 756
Score = 31.2 bits (69), Expect = 1.8
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 329 PGLPGALPPPPAAEEEASANYFNLPPS----GPPAVVNIALPPPPGIAPPPPP 377
PG+P PPPP N +LPP GPP + PP I PP P
Sbjct: 713 PGVPPPPPPPPFLRP--GFNPMHLPPGFLPPGPPPPIT----PPVSIPPPHTP 759
>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
Length = 1271
Score = 66.2 bits (160), Expect = 5e-11
Identities = 61/235 (25%), Positives = 92/235 (39%), Gaps = 58/235 (24%)
Query: 223 LDPPEDKTI----TTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQ 278
L P KT+ TTL+VG + T+ DL N F +FG+I +I ++ + CA++ RQ
Sbjct: 464 LPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQ 523
Query: 279 AAEVAAEK-SFNKLIVNGRRLNVKWGRSQAARGKEK--------------------EKDG 317
A A +K S + + + + W ++ + + K + +G
Sbjct: 524 DAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEG 583
Query: 318 TTDSGI--------------KLEPVPGLPGALPPPPAAEEE----ASANYFNLP------ 353
+ G+ EPV P E+E A F P
Sbjct: 584 FAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQI 643
Query: 354 PSGP--------PAVVNIALP-PPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGP 399
P P P +++P PPPG +P PPP F F+P PPP FM P P
Sbjct: 644 PVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVP 698
Score = 31.2 bits (69), Expect = 1.8
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 327 PVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPP 376
PVP PG P PP AS N PP P V + PPP I P P
Sbjct: 664 PVPP-PGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVP 712
>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
Length = 378
Score = 64.3 bits (155), Expect = 2e-10
Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 221 PRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVV---QRQQ---CAFIQF 274
PR D + I +VGG+ ET+LR +F +FG + + ++ ++Q+ FI F
Sbjct: 105 PRSDNSKSNKI---FVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 275 ATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGA 334
Q+ + A F+ ++ G+++ VK + ++ + + G + G ++ P A
Sbjct: 162 EDEQSVDQAVNMHFHDIM--GKKVEVKRAEPRDSKSQAPGQPGASQWGSRVVPNAANGWA 219
Query: 335 LPPPPAAEEEASANYFNLPPS------GPPAVVNIALPPPPG----IAPPPPPGFGPHMF 384
PPP ++ +P GPP A PPPP I PP GF P
Sbjct: 220 GQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQG 279
Query: 385 HPMG--------------PPPPFMRAPGPIHYPSQDP 407
P G PPPP AP + P P
Sbjct: 280 FPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATP 316
Score = 33.9 bits (76), Expect = 0.28
Identities = 21/76 (27%), Positives = 26/76 (34%), Gaps = 26/76 (34%)
Query: 336 PPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP------------------------GI 371
PPPP ++ A PP P +A PPPP G
Sbjct: 296 PPPPPPDQFAPPGV--PPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQPDFPYGQYGLGS 353
Query: 372 APPPPPGFGPHMFHPM 387
P PPG GPH + +
Sbjct: 354 YSPAPPGCGPHFVYSL 369
Score = 30.0 bits (66), Expect = 4.1
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 231 ITTLYVGGLGDTITETDLRNHFYQFGEI 258
I L+VGGL + T+ LR++F Q+GE+
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEV 36
>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
Length = 407
Score = 64.3 bits (155), Expect = 2e-10
Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 221 PRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVV---QRQQ---CAFIQF 274
PR D + I +VGG+ ET+LR +F +FG + + ++ ++Q+ FI F
Sbjct: 105 PRSDNSKSNKI---FVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 275 ATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGA 334
Q+ + A F+ ++ G+++ VK + ++ + + G + G ++ P A
Sbjct: 162 EDEQSVDQAVNMHFHDIM--GKKVEVKRAEPRDSKSQAPGQPGASQWGSRVVPNAANGWA 219
Query: 335 LPPPPAAEEEASANYFNLPPS------GPPAVVNIALPPPPG----IAPPPPPGFGPHMF 384
PPP ++ +P GPP A PPPP I PP GF P
Sbjct: 220 GQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQG 279
Query: 385 HPMG--------------PPPPFMRAPGPIHYPSQDP 407
P G PPPP AP + P P
Sbjct: 280 FPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATP 316
Score = 32.0 bits (71), Expect = 1.1
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 27/103 (26%)
Query: 336 PPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPP----PP--------------- 376
PPPP ++ A PP P +A PPPP A P PP
Sbjct: 296 PPPPPPDQFAPPGV--PPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQPDFPYGQYAGYG 353
Query: 377 ---PGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGK 416
GFG P PP + GP S P G+ G+
Sbjct: 354 QDLSGFGQGFSDPSQQPPSY---GGPSVPGSGGPPAGGSGFGR 393
Score = 30.0 bits (66), Expect = 4.1
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 231 ITTLYVGGLGDTITETDLRNHFYQFGEI 258
I L+VGGL + T+ LR++F Q+GE+
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEV 36
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 55.1 bits (131), Expect = 1e-07
Identities = 56/204 (27%), Positives = 76/204 (37%), Gaps = 29/204 (14%)
Query: 234 LYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQ-------CAFIQFATRQAAEVAAEK 286
+++G L I E L + F FG I + R AFI FA+ A++ A E
Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161
Query: 287 SFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKL---------EPVPGLPGALPP 337
+ + N R + V + + ++G E+ G+ + P A PP
Sbjct: 162 MNGQYLCN-RPITVSYAFKKDSKG---ERHGSAAERLLAAQNPLSQADRPHQLFADAPPP 217
Query: 338 PPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPP-PPPGFGPHMFHPMGPPPPFMRA 396
P A S+ LPP G +PPP PP PPPG P P PPPP
Sbjct: 218 PSAPNPVVSSLGSGLPPPG--------MPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPG 269
Query: 397 PGPIHYPSQDPQRMGAHAGKHSSP 420
PS G HS P
Sbjct: 270 AAGHGPPSAGTPGAGHPGHGHSHP 293
Score = 42.7 bits (99), Expect = 6e-04
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 15/85 (17%)
Query: 327 PVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALP---PPPGIAPPPPPGFGPHM 383
P PG+P PPP +PP GPP + P PP G+ PPP PH
Sbjct: 337 PPPGMPHPGPPP-----------MGMPPRGPPFGSPMGHPGPMPPHGMRGPPPL-MPPHG 384
Query: 384 FHPMGPPPPFMRAPGPIHYPSQDPQ 408
+ PPP+ GP+ P P+
Sbjct: 385 YTGPPRPPPYGYQRGPLPPPRPTPR 409
Score = 42.0 bits (97), Expect = 0.001
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 327 PVPGLPGALPPPPAAEEEAS---ANYFNLPPSGPPAVVNIALP-PPPGIAPPPPPG---- 378
P P PG +P P ++ + + + P +GPP P PPPG+ P PP
Sbjct: 293 PHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMP 352
Query: 379 -----FGPHMFHPMGPPPPFMRAPGPIHYP 403
FG M HP PP MR P P+ P
Sbjct: 353 PRGPPFGSPMGHPGPMPPHGMRGPPPLMPP 382
Score = 36.2 bits (82), Expect = 0.057
Identities = 36/125 (28%), Positives = 44/125 (35%), Gaps = 34/125 (27%)
Query: 329 PGLPGALPPPPAAEEEAS------------------ANYFNLPPSGPP----AVVNIAL- 365
PG+P A+PPPP A ++ PP G P + + +A
Sbjct: 255 PGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHH 314
Query: 366 ---------PPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPG-PIHYPSQDPQRMGAHAG 415
PPG PPP P M HP GPPP M G P P P M H
Sbjct: 315 GPHGLGHPHAGPPGSGGQPPPRPPPGMPHP-GPPPMGMPPRGPPFGSPMGHPGPMPPHGM 373
Query: 416 KHSSP 420
+ P
Sbjct: 374 RGPPP 378
Score = 30.0 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 233 TLYVGGLGDTITETDLRNHFYQFGEI------RTITVVQRQQCAFIQFATRQAAEVAAEK 286
T+YVGGL + ++E L F Q G + + Q Q F++F + + A+ A K
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAI-K 72
Query: 287 SFNKLIVNGRRLNV 300
N + + G+ + V
Sbjct: 73 IMNMIKLYGKPIRV 86
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 54.7 bits (130), Expect = 2e-07
Identities = 30/77 (38%), Positives = 35/77 (45%), Gaps = 15/77 (19%)
Query: 327 PVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHP 386
P PG P LPP P PP GPP + P PPGI PP P P + P
Sbjct: 470 PPPGPPPGLPPGP-------------PPRGPPP--RLPPPAPPGIPPPRPGMMRPPLVPP 514
Query: 387 MGPPPPFMRAPGPIHYP 403
+GP PP + P P+ P
Sbjct: 515 LGPAPPGLFPPAPLPNP 531
Score = 52.4 bits (124), Expect = 8e-07
Identities = 41/129 (31%), Positives = 48/129 (37%), Gaps = 24/129 (18%)
Query: 303 GRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVN 362
G S A+ ++ S I+ P+PG P L PPPA LPP PP
Sbjct: 382 GTSTASSQQQAPPQSVPPSQIQAPPMPG-PPPLGPPPAPPLRPPGPPTGLPPGPPPGAPP 440
Query: 363 IALPP-----------------PPGIAPPPPPGFGPHMFHPMGP----PPPFMRAPGPIH 401
PP PPG P PPPG P + P GP PPP + P P
Sbjct: 441 FLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGL--PPGPPPRGPPPRLPPPAPPG 498
Query: 402 YPSQDPQRM 410
P P M
Sbjct: 499 IPPPRPGMM 507
Score = 42.0 bits (97), Expect = 0.001
Identities = 32/111 (28%), Positives = 40/111 (36%), Gaps = 24/111 (21%)
Query: 304 RSQAARGKEKEKDGTTDSGIKLEPVPGL--PGALPPPPAAEEEASANYFNLPPSGPPAVV 361
+SQ +E DGT+ + + + P P + PP PP GPP
Sbjct: 369 QSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGP---------PPLGPPPAP 419
Query: 362 NIALPPPPGIAPPPPPGFGPHMFHPMG-------------PPPPFMRAPGP 399
+ P PP PP PP P P G P PP R PGP
Sbjct: 420 PLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGP 470
Score = 31.6 bits (70), Expect = 1.4
Identities = 27/80 (33%), Positives = 31/80 (38%), Gaps = 27/80 (33%)
Query: 321 SGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALP--------PPPGIA 372
S I ++ +P LPGA PP + A GPP LP PPG
Sbjct: 149 SNILIQDIP-LPGAQPPSILKKTSAY---------GPPTRAVSILPLLGHGVPRLPPGRK 198
Query: 373 PPPPPGFGPHMFHPMGPPPP 392
PP P P GPPPP
Sbjct: 199 PPGP---------PPGPPPP 209
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 53.5 bits (127), Expect = 3e-07
Identities = 39/100 (39%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 327 PVPGLPGALPP-----PPAAEEEASANYFNLP---PSGPPAVVNIALPPPPGIAPPPPPG 378
P PG+ G+ PP PPA + A + P P+ PPAV + PPG PP PP
Sbjct: 117 PAPGV-GSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSA----PPGAPPPTPPS 171
Query: 379 FGPHMFHPM--GPPPPFMRAPGPIHYPSQDPQRMGAHAGK 416
G P GPPPP PGP P Q P G GK
Sbjct: 172 SGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGK 211
Score = 38.9 bits (89), Expect = 0.009
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 226 PEDKTITT---LYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEV 282
P +KT T L+VG L ITE + + F ++GE + + + + FI+ +R AE+
Sbjct: 288 PGEKTYTQRCRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEI 347
Query: 283 AAEKSFNKLIVNGRRLNVKWGRSQAA 308
A+ + + GR+L V++ AA
Sbjct: 348 -AKAELDDTPMRGRQLRVRFATHAAA 372
Score = 35.0 bits (79), Expect = 0.13
Identities = 29/97 (29%), Positives = 34/97 (35%), Gaps = 16/97 (16%)
Query: 327 PVPGLPGA---LPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHM 383
P PG G +PPPP +++ PP PP PP PPP P PH
Sbjct: 49 PGPGQSGPKPPIPPPPPHQQQQQP-----PPQQPPP------QQPPPHQPPPHP--QPHQ 95
Query: 384 FHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP 420
PPP P P P A S+P
Sbjct: 96 QQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAP 132
Score = 34.3 bits (77), Expect = 0.22
Identities = 26/76 (34%), Positives = 27/76 (35%), Gaps = 12/76 (15%)
Query: 332 PGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPP---------PGFGPH 382
PG P PP A A PP PP+ PP G PPPP P GP
Sbjct: 147 PGPTPTPPPAVTSAPPG---APPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPG 203
Query: 383 MFHPMGPPPPFMRAPG 398
P G P PG
Sbjct: 204 PGGPKGGKMPGGPKPG 219
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 52.4 bits (124), Expect = 8e-07
Identities = 42/135 (31%), Positives = 55/135 (40%), Gaps = 34/135 (25%)
Query: 273 QFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPV-PGL 331
+F RQ A+ +K K +K ++ + + + + ++ SGI P P L
Sbjct: 507 EFTARQEAQAELQKRDEK---------IKELEAEIQQLRTQAQVLSSSSGIPGPPAAPPL 557
Query: 332 PGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP-------GIAPPPPPGFGPHMF 384
PG PPPP P PP LPPPP GI PPPPP P +F
Sbjct: 558 PGVGPPPP--------------PPAPPLPGGAPLPPPPPPLPGMMGIPPPPPP---PLLF 600
Query: 385 HPMGPPPPFMRAPGP 399
PPPP P P
Sbjct: 601 GGPPPPPPLGGVPPP 615
Score = 40.8 bits (94), Expect = 0.002
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 327 PVPGLPGA--LPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGI-APPPPPGFGPHM 383
P P LPG LPPPP +PP PP ++ PPPP + PPPPG ++
Sbjct: 567 PAPPLPGGAPLPPPPPP----LPGMMGIPPPPPPPLLFGGPPPPPPLGGVPPPPGISLNL 622
Query: 384 FHPM 387
+ M
Sbjct: 623 PYGM 626
Score = 32.3 bits (72), Expect = 0.83
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 10/54 (18%)
Query: 356 GPPAVVNIALPPPPGIAPPPPPGFGPHM--FHPMGPPPPFMRAPGPIHYPSQDP 407
GPPA PP PG+ PPPP P + P+ PPPP + PG + P P
Sbjct: 550 GPPAA-----PPLPGV-GPPPPPPAPPLPGGAPLPPPPPPL--PGMMGIPPPPP 595
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 52.4 bits (124), Expect = 8e-07
Identities = 42/135 (31%), Positives = 55/135 (40%), Gaps = 34/135 (25%)
Query: 273 QFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPV-PGL 331
+F RQ A+ +K K +K ++ + + + + ++ SGI P P L
Sbjct: 507 EFTARQEAQAELQKRDEK---------IKELEAEIQQLRTQAQVLSSSSGIPGPPAAPPL 557
Query: 332 PGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP-------GIAPPPPPGFGPHMF 384
PG PPPP P PP LPPPP GI PPPPP P +F
Sbjct: 558 PGVGPPPP--------------PPAPPLPGGAPLPPPPPPLPGMMGIPPPPPP---PLLF 600
Query: 385 HPMGPPPPFMRAPGP 399
PPPP P P
Sbjct: 601 GGPPPPPPLGGVPPP 615
Score = 40.8 bits (94), Expect = 0.002
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 327 PVPGLPGA--LPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGI-APPPPPGFGPHM 383
P P LPG LPPPP +PP PP ++ PPPP + PPPPG ++
Sbjct: 567 PAPPLPGGAPLPPPPPP----LPGMMGIPPPPPPPLLFGGPPPPPPLGGVPPPPGISLNL 622
Query: 384 FHPM 387
+ M
Sbjct: 623 PYGM 626
Score = 32.3 bits (72), Expect = 0.83
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 10/54 (18%)
Query: 356 GPPAVVNIALPPPPGIAPPPPPGFGPHM--FHPMGPPPPFMRAPGPIHYPSQDP 407
GPPA PP PG+ PPPP P + P+ PPPP + PG + P P
Sbjct: 550 GPPAA-----PPLPGV-GPPPPPPAPPLPGGAPLPPPPPPL--PGMMGIPPPPP 595
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 52.0 bits (123), Expect = 1e-06
Identities = 72/283 (25%), Positives = 106/283 (37%), Gaps = 51/283 (18%)
Query: 174 KRGEECPYRHEKPTDPDDPLADQNIKD------RYYG--INDPVADKLLKRASTMP-RLD 224
+R + R + P P+ P+A +IK+ R+YG +N+ K K+ RL
Sbjct: 140 RRQRKSEKRRDPPNGPNLPMATVDIKNPEITTNRFYGPQVNNISHTKEKKKGKAKKKRLT 199
Query: 225 PPEDKTITTL-YVGGLG-DTITETDLRN------HFYQFGEIRTITVVQRQQCAFIQFAT 276
+ T + ++G +G D T DL N + + I + R+ I
Sbjct: 200 KADIGTPSNFQHIGHVGWDPNTGFDLNNLDPELKNLFDMCGISEAQLKDRETSKVIYDFI 259
Query: 277 RQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALP 336
+ V A K N R + G +SG P G GA P
Sbjct: 260 EKTGGVEAVK-------NELRRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGR-GAPP 311
Query: 337 PPPAAEEEASANYFNLPPSGPPAVVNIALPPPPG--IAPPPPP----------------- 377
PPP+ A+ PP PP+ ++A+PPPP + PPPPP
Sbjct: 312 PPPSRAPTAA------PPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSV 365
Query: 378 -GFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSS 419
G GP P PPPP P P PS ++ AG ++
Sbjct: 366 LGVGPVAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTTAGNKAA 408
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 52.0 bits (123), Expect = 1e-06
Identities = 31/87 (35%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 317 GTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPP 376
GT G+ P LP PPPP + E LPP P + PPP PPPP
Sbjct: 540 GTGGGGLPAPPDDFLPPPPPPPPLDDPE-------LPPPPPDF-----MEPPPDFVPPPP 587
Query: 377 PGFGPHMFHPMGPPPPFMRAPGPIHYP 403
P + + PPPP AP P P
Sbjct: 588 PSYAGIAGSELPPPPPPPPAPAPAPVP 614
Score = 45.1 bits (105), Expect = 1e-04
Identities = 38/120 (31%), Positives = 43/120 (35%), Gaps = 6/120 (5%)
Query: 306 QAARGKEKEKDGTTDSGIKLEP-VPGLPGA----LPPPPAAEEEASANYFNLPPSGPPAV 360
+A R E KD G +P VP P A LPPPP + + P
Sbjct: 482 EAQRHAETSKDKKPALGNHHDPAVPRAPHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGT 541
Query: 361 VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP 420
LP PP PPPP P + PPPP P P P P G AG P
Sbjct: 542 GGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDFMEPPPDFVPPPPPSYAGI-AGSELPP 600
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 52.0 bits (123), Expect = 1e-06
Identities = 35/90 (38%), Positives = 39/90 (43%), Gaps = 19/90 (21%)
Query: 327 PVPGLPGA----LPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPG-----IAPPPPP 377
P+PGLP A P PP EE+ PP+ PPA PPPP P PPP
Sbjct: 1435 PLPGLPSANSNGTPEPPLLEEKP-------PPTPPPAPTPQPQPPPPPPPPQPALPSPPP 1487
Query: 378 GFGPHMFHPMGPPPPFMRAPGPIHYPSQDP 407
P P PPPP + P P PS P
Sbjct: 1488 LVAP---TPSSPPPPPLPPPPPPAMPSPPP 1514
Score = 42.4 bits (98), Expect = 8e-04
Identities = 29/75 (38%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 327 PVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHP 386
P P LP PPP A +S LPP PPA+ + PPPP AP P P P
Sbjct: 1478 PQPALPS--PPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSP 1535
Query: 387 MGPPPPFMRAPGPIH 401
P P R P+H
Sbjct: 1536 EDPELPDTR---PLH 1547
Score = 38.5 bits (88), Expect = 0.012
Identities = 37/132 (28%), Positives = 48/132 (36%), Gaps = 29/132 (21%)
Query: 311 KEKEKDGTTDSGIKLEPVPGLPGAL-----------PPPPAAEEEASANYFNLPPSGPPA 359
K E+ G T G+ V GA PPPP A+ + L +G P
Sbjct: 730 KGPERGGETPEGLATSVVHYGAGAKELGAFLQKSPPPPPPTAQSTQPTPHGLLLEAGGPD 789
Query: 360 VVNIALPPPPGI-------APPPPPG---FGPHMFHPM----GPPPPFMRAPGPIHYPSQ 405
+ + PPPP + AP P P G H+ P P PP P P P
Sbjct: 790 LPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPP----PPPPPPPPP 845
Query: 406 DPQRMGAHAGKH 417
P ++ AH H
Sbjct: 846 MPLQLEAHLRSH 857
Score = 33.9 bits (76), Expect = 0.28
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 10/95 (10%)
Query: 314 EKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAP 373
E+D + E + AL PP A + ++ P GPP A+P P
Sbjct: 1384 EEDSVAKNRDLQESISSAISALDDPPLAGPKDTST-----PDGPPLAPAAAVP-----GP 1433
Query: 374 PPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQ 408
PP PG + PP P P P+ PQ
Sbjct: 1434 PPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQ 1468
Score = 30.8 bits (68), Expect = 2.4
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 329 PGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPP 376
PGL PP +A L SGP + A PPPP PPPP
Sbjct: 1006 PGLGLDPNKPPELPSTVNAEPLGLIQSGP----HQAAPPPPPPPPPPP 1049
Score = 30.0 bits (66), Expect = 4.1
Identities = 30/102 (29%), Positives = 38/102 (37%), Gaps = 19/102 (18%)
Query: 312 EKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANY-----FNLPPSGPPAVVNIALP 366
E E D +G P PG P P P AS L P+ PP + +
Sbjct: 969 EDEGDPKAGAG----PPPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKPPELPSTVNA 1024
Query: 367 PPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQ 408
P G+ GPH P PPPP P P P+ +P+
Sbjct: 1025 EPLGLIQS-----GPHQAAPPPPPPP---PPPPA--PASEPK 1056
Score = 29.3 bits (64), Expect = 7.0
Identities = 27/91 (29%), Positives = 31/91 (34%), Gaps = 29/91 (31%)
Query: 329 PGLPGALPPP----------------PAAEEEASANYFNLPPSGPPAVVNIALPPPPGIA 372
PG P PPP AA E++S +N + P PPPP A
Sbjct: 229 PGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPG-------PPPPERA 281
Query: 373 PPPPPGFGPHMFHPMG--PPPPFMRAPGPIH 401
P H P PPPP P P H
Sbjct: 282 LPRQDTVIKHYQRPASAQPPPP----PPPAH 308
Score = 28.9 bits (63), Expect = 9.1
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Query: 327 PVPGLPGALPPP---PAAEEEASANYFNLPPSGPPAVVN-IALPPPPGIAPPPPPGFGPH 382
PVP PP PA + + +L PS P V + + G P G GP
Sbjct: 163 PVPSSLSLQDPPFSPPANGLLSPHDVLHLKPSQAPTVPSSLGFERLAGGGVLGPAGLGPA 222
Query: 383 MFHPMGPPPPFMRAPGPIHYPSQ----DPQRMGAHAGKHSSP 420
P P PP P P H P+Q A A + SSP
Sbjct: 223 QTPPYRPGPP-DPPPPPRHLPTQFNLLASSSAAAAAAEQSSP 263
>gi|71164894 trinucleotide repeat containing 4 [Homo sapiens]
Length = 465
Score = 51.6 bits (122), Expect = 1e-06
Identities = 72/278 (25%), Positives = 101/278 (36%), Gaps = 73/278 (26%)
Query: 198 IKDRYYGINDPVA-------DKLLKRAS------TMPRLDPP------------EDKTIT 232
IKD+Y G++ A D LK S T+P ++ P ED+
Sbjct: 39 IKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRK-- 96
Query: 233 TLYVGGLGDTITETDLRNHFYQFGEIRTITVVQ-----RQQCAFIQFATRQAAEVAAEKS 287
L+VG LG T+ D+R F FG I TV++ + CAF++F T A+ A
Sbjct: 97 -LFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTL 155
Query: 288 FNKLIVNG--RRLNVKWGRSQAARGKEKEKDGTTDSG------IKLEPVPGLPGALPPPP 339
+ + G L VK+ ++ RG + + T G ++ AL
Sbjct: 156 HSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQ 215
Query: 340 AAEEEASANYFNLPPSGPPAVVN------------IALPPPPGIAPPPPP---------- 377
AA A + Y L P A V IA P P PP
Sbjct: 216 AALVAAHSAY--LSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAI 273
Query: 378 -------GFGPHMFHPMGPPPPFMRAPGPIH-YPSQDP 407
G+ P P G P P P +H YP+Q P
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSP 311
Score = 34.7 bits (78), Expect = 0.17
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 234 LYVGGLGDTITETDLRNHFYQFGEIRTITVVQ------RQQCAFIQFATRQAAEVAAEKS 287
L+VG + + E DL+ F QFG I +TV++ + CAF+ + R +A A
Sbjct: 9 LFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSAL 68
Query: 288 FNKLIVNG--RRLNVKWGRSQAARGKEKE 314
+ + G R + VK S+ +RG++++
Sbjct: 69 HEQKTLPGMNRPIQVKPADSE-SRGEDRK 96
Score = 30.0 bits (66), Expect = 4.1
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 325 LEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIA---PPPPP 377
+ P P A P P + A ++ ++V A P PP + PPPPP
Sbjct: 303 VHPYPAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPP 358
>gi|206597502 NESH protein isoform 2 [Homo sapiens]
Length = 360
Score = 51.6 bits (122), Expect = 1e-06
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 291 LIVNGRRLNVKWGRSQAARGKEKEKDGT-TDSGIKLEPVPGLPGAL--PPPPAAEE---- 343
++ +GR S A+ G + G T G P P LP +L PPPPAA E
Sbjct: 190 VVPDGRLSAASSASSLASAGSAEGVGGAPTPKGQAAPPAPPLPSSLDPPPPPAAVEVFQR 249
Query: 344 EASANYFNLPPSGPPAVVNIALPPPPGI------APPPPPGFGP 381
+ + PP + + LPPPP + PPPPPGFGP
Sbjct: 250 PPTLEELSPPPPDEELPLPLDLPPPPPLDGDELGLPPPPPGFGP 293
Score = 29.6 bits (65), Expect = 5.4
Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 16/92 (17%)
Query: 332 PGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAP----------PPPPGFGP 381
P LP P A+++ +L +G V A P AP PPPP
Sbjct: 185 PVHLPVVPDGRLSAASSASSLASAGSAEGVGGAPTPKGQAAPPAPPLPSSLDPPPPPAAV 244
Query: 382 HMF------HPMGPPPPFMRAPGPIHYPSQDP 407
+F + PPPP P P+ P P
Sbjct: 245 EVFQRPPTLEELSPPPPDEELPLPLDLPPPPP 276
>gi|7705981 NESH protein isoform 1 [Homo sapiens]
Length = 366
Score = 51.6 bits (122), Expect = 1e-06
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 291 LIVNGRRLNVKWGRSQAARGKEKEKDGT-TDSGIKLEPVPGLPGAL--PPPPAAEE---- 343
++ +GR S A+ G + G T G P P LP +L PPPPAA E
Sbjct: 196 VVPDGRLSAASSASSLASAGSAEGVGGAPTPKGQAAPPAPPLPSSLDPPPPPAAVEVFQR 255
Query: 344 EASANYFNLPPSGPPAVVNIALPPPPGI------APPPPPGFGP 381
+ + PP + + LPPPP + PPPPPGFGP
Sbjct: 256 PPTLEELSPPPPDEELPLPLDLPPPPPLDGDELGLPPPPPGFGP 299
Score = 29.6 bits (65), Expect = 5.4
Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 16/92 (17%)
Query: 332 PGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAP----------PPPPGFGP 381
P LP P A+++ +L +G V A P AP PPPP
Sbjct: 191 PVHLPVVPDGRLSAASSASSLASAGSAEGVGGAPTPKGQAAPPAPPLPSSLDPPPPPAAV 250
Query: 382 HMF------HPMGPPPPFMRAPGPIHYPSQDP 407
+F + PPPP P P+ P P
Sbjct: 251 EVFQRPPTLEELSPPPPDEELPLPLDLPPPPP 282
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 50.8 bits (120), Expect = 2e-06
Identities = 35/86 (40%), Positives = 38/86 (44%), Gaps = 13/86 (15%)
Query: 322 GIKLEPVP---GLPGALPPPPAAEEEASANYFNLPPSGPPAVVNI-ALPPPP-----GIA 372
GI P P G PG PPP ++ PP PP + LPPPP G A
Sbjct: 331 GIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGA 390
Query: 373 PPPPPGFGPHMFHPMGPPPPFMRAPG 398
PPPPP P P PPPPF A G
Sbjct: 391 PPPPPPPPP----PGPPPPPFTGADG 412
Score = 46.2 bits (108), Expect = 6e-05
Identities = 29/85 (34%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 327 PVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHP 386
P P + G PPPP + PP PP+ PP P A PPPP P +P
Sbjct: 325 PPPPMIGIPPPPPPVGFGSPGTP---PPPSPPS-----FPPHPDFAAPPPPPPPPAADYP 376
Query: 387 MGPPPPFMRAPGPIHYPSQDPQRMG 411
PPPP + G P P G
Sbjct: 377 TLPPPPLSQPTGGAPPPPPPPPPPG 401
Score = 45.1 bits (105), Expect = 1e-04
Identities = 35/99 (35%), Positives = 38/99 (38%), Gaps = 21/99 (21%)
Query: 336 PPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP--GIAPPPPP-GFG-----PHMFHPM 387
P PP F PP+ PP PPPP GI PPPPP GFG P P
Sbjct: 302 PAPPLGSPPGPKPGFAPPPAPPP-------PPPPMIGIPPPPPPVGFGSPGTPPPPSPPS 354
Query: 388 GPPPPFMRAPGP------IHYPSQDPQRMGAHAGKHSSP 420
PP P AP P YP+ P + G P
Sbjct: 355 FPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPP 393
Score = 38.5 bits (88), Expect = 0.012
Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 13/92 (14%)
Query: 335 LPPPPAAEEEASANYFN-----------LPPSGPPAVVNIALP--PPPGIAPPPPPGFGP 381
LPPPPA N + PS PP + P P PG APPP P P
Sbjct: 267 LPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPP 326
Query: 382 HMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAH 413
+ PPPP + P P P H
Sbjct: 327 PPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPH 358
Score = 37.7 bits (86), Expect = 0.020
Identities = 26/73 (35%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 327 PVPGLPGALPP------PPAAEEEASANYFNLPPS--GPPAVVNIALPPPPGIAPPPPPG 378
P P P + PP PP +A+Y LPP P PPPP PPPP
Sbjct: 347 PPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPP 406
Query: 379 FGPHMFHPMGPPP 391
F P PPP
Sbjct: 407 FTGADGQPAIPPP 419
>gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo
sapiens]
Length = 159
Score = 50.8 bits (120), Expect = 2e-06
Identities = 37/112 (33%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 301 KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGA---LPPPPAAEEEASANYFNLPPSGP 357
KW QA +K I P P A +PPPP+ P G
Sbjct: 40 KWMEEQAQSLIDKTTAAFQQGKIPPTPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGG 99
Query: 358 PAVVNIALPPPPGIAP-PPPPGFGPHM--FHPMGPPPPFMRAPG-PIHYPSQ 405
P ++ + PPPPG+ P P PG P M PM P PP MR P P+ P++
Sbjct: 100 PPMMPMMGPPPPGMMPVGPAPGMRPPMGGHMPMMPGPPMMRPPARPMMVPTR 151
Score = 47.0 bits (110), Expect = 3e-05
Identities = 34/88 (38%), Positives = 38/88 (43%), Gaps = 25/88 (28%)
Query: 333 GALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGF-------GPHMFH 385
G +PP P F+ PP PA +PPPP + PP PG GP M
Sbjct: 60 GKIPPTP----------FSAPP---PA--GAMIPPPPSLPGPPRPGMMPAPHMGGPPMMP 104
Query: 386 PMGPPPPFMRAPGPIHYPSQDPQRMGAH 413
MGPPPP M GP P P MG H
Sbjct: 105 MMGPPPPGMMPVGPA--PGMRPP-MGGH 129
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 49.7 bits (117), Expect = 5e-06
Identities = 34/77 (44%), Positives = 36/77 (46%), Gaps = 22/77 (28%)
Query: 332 PGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPP-PGFGPHMFHPMGPP 390
P A PPPP LPP PA ++ALPPPPG PPPP P GP P PP
Sbjct: 310 PLAPPPPPP-----------LPPG--PAQASVALPPPPGPPPPPPLPSTGP----PPPPP 352
Query: 391 PPFMRAPGPIHYPSQDP 407
PP P P P P
Sbjct: 353 PP----PLPNQVPPPPP 365
Score = 47.8 bits (112), Expect = 2e-05
Identities = 33/79 (41%), Positives = 36/79 (45%), Gaps = 17/79 (21%)
Query: 319 TDSGIKLEPV-PGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP----GIAP 373
+ GI L P+ P P LPP PA A PP GPP PPPP G P
Sbjct: 302 SQQGIVLGPLAPPPPPPLPPGPAQASVALP-----PPPGPP-------PPPPLPSTGPPP 349
Query: 374 PPPPGFGPHMFHPMGPPPP 392
PPPP P+ P PPPP
Sbjct: 350 PPPPPPLPNQVPPPPPPPP 368
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 336 PPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMR 395
PPPP A A+ PP GPP PP P PPPPP P + + + PPPP
Sbjct: 315 PPPPLPPGPAQASVALPPPPGPPPP-----PPLPSTGPPPPPP-PPPLPNQVPPPPPPPP 368
Query: 396 AP 397
AP
Sbjct: 369 AP 370
Score = 38.9 bits (89), Expect = 0.009
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 9/64 (14%)
Query: 317 GTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPP 376
G + + L P PG P PPPP PP PP + N PPPP PP
Sbjct: 322 GPAQASVALPPPPGPP---PPPPLPSTGPP------PPPPPPPLPNQVPPPPPPPPAPPL 372
Query: 377 PGFG 380
P G
Sbjct: 373 PASG 376
Score = 32.7 bits (73), Expect = 0.63
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 15/65 (23%)
Query: 354 PSGPPAVVNIALPPPPGIAP----------PPPPGFGPHMFHP-MGPPPPFMRAPGPIHY 402
PS V+ PPPP P PPPPG P P GPPPP P P
Sbjct: 301 PSQQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPP----PPPPPL 356
Query: 403 PSQDP 407
P+Q P
Sbjct: 357 PNQVP 361
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 49.7 bits (117), Expect = 5e-06
Identities = 34/77 (44%), Positives = 36/77 (46%), Gaps = 22/77 (28%)
Query: 332 PGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPP-PGFGPHMFHPMGPP 390
P A PPPP LPP PA ++ALPPPPG PPPP P GP P PP
Sbjct: 310 PLAPPPPPP-----------LPPG--PAQASVALPPPPGPPPPPPLPSTGP----PPPPP 352
Query: 391 PPFMRAPGPIHYPSQDP 407
PP P P P P
Sbjct: 353 PP----PLPNQVPPPPP 365
Score = 47.8 bits (112), Expect = 2e-05
Identities = 33/79 (41%), Positives = 36/79 (45%), Gaps = 17/79 (21%)
Query: 319 TDSGIKLEPV-PGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP----GIAP 373
+ GI L P+ P P LPP PA A PP GPP PPPP G P
Sbjct: 302 SQQGIVLGPLAPPPPPPLPPGPAQASVALP-----PPPGPP-------PPPPLPSTGPPP 349
Query: 374 PPPPGFGPHMFHPMGPPPP 392
PPPP P+ P PPPP
Sbjct: 350 PPPPPPLPNQVPPPPPPPP 368
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 336 PPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMR 395
PPPP A A+ PP GPP PP P PPPPP P + + + PPPP
Sbjct: 315 PPPPLPPGPAQASVALPPPPGPPPP-----PPLPSTGPPPPPP-PPPLPNQVPPPPPPPP 368
Query: 396 AP 397
AP
Sbjct: 369 AP 370
Score = 38.9 bits (89), Expect = 0.009
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 9/64 (14%)
Query: 317 GTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPP 376
G + + L P PG P PPPP PP PP + N PPPP PP
Sbjct: 322 GPAQASVALPPPPGPP---PPPPLPSTGPP------PPPPPPPLPNQVPPPPPPPPAPPL 372
Query: 377 PGFG 380
P G
Sbjct: 373 PASG 376
Score = 32.7 bits (73), Expect = 0.63
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 15/65 (23%)
Query: 354 PSGPPAVVNIALPPPPGIAP----------PPPPGFGPHMFHP-MGPPPPFMRAPGPIHY 402
PS V+ PPPP P PPPPG P P GPPPP P P
Sbjct: 301 PSQQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPP----PPPPPL 356
Query: 403 PSQDP 407
P+Q P
Sbjct: 357 PNQVP 361
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 49.7 bits (117), Expect = 5e-06
Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 333 GALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGI-------APPPPPGFGPHMFH 385
G PPPP + + + PP+ P A PPPP + APPPPP + H
Sbjct: 293 GLAPPPPTSASPSLLSNRPPPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGSE 352
Query: 386 PMG---PPPPFMRAPGPIHYPSQDPQRMG 411
P PPPP R P P P R G
Sbjct: 353 PPSRGKPPPPPSRTPAGPPPPPPPPLRNG 381
Score = 34.3 bits (77), Expect = 0.22
Identities = 22/86 (25%), Positives = 30/86 (34%), Gaps = 21/86 (24%)
Query: 321 SGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP----------- 369
S + + P PPPP + P+GP + N + P P
Sbjct: 235 SPVNIRTGPSGQSLAPPPPPYRQPPGV------PNGPSSPTNESAPELPQRHNSLHRKTP 288
Query: 370 ----GIAPPPPPGFGPHMFHPMGPPP 391
G+APPPP P + PPP
Sbjct: 289 GPVRGLAPPPPTSASPSLLSNRPPPP 314
Score = 33.5 bits (75), Expect = 0.37
Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 35/96 (36%)
Query: 336 PPPPAAEEEA----------SANYFN----LPPS----------GPPAVVNIALPPPPGI 371
PPPP A A +N LPP+ GPPA PP +
Sbjct: 179 PPPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGPPA--------PPPV 230
Query: 372 APPPPP---GFGPHMFHPMGPPPPFMRAPGPIHYPS 404
PPP P GP PPPP+ + PG + PS
Sbjct: 231 KPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPS 266
Score = 31.6 bits (70), Expect = 1.4
Identities = 28/90 (31%), Positives = 33/90 (36%), Gaps = 25/90 (27%)
Query: 327 PVPGLPGALPPPPAAEEEASANYFN----LPPSG-------------------PPAVVNI 363
P PG PP P + A +N LPP+ PP+ VNI
Sbjct: 180 PPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGPPAPPPVKPPPSPVNI 239
Query: 364 AL-PPPPGIAPPPPPGFGPHMFHPMGPPPP 392
P +APPPPP P P GP P
Sbjct: 240 RTGPSGQSLAPPPPPYRQPPGV-PNGPSSP 268
Score = 30.0 bits (66), Expect = 4.1
Identities = 25/66 (37%), Positives = 25/66 (37%), Gaps = 26/66 (39%)
Query: 330 GLPGALPPPPAAEEEASANYFNLPPS-GPPAVVNIALPPPPGIAP--PPPPGFGPHMFHP 386
G A PPPP S PPS G P PPPP P PPPP
Sbjct: 335 GARDAPPPPPPYRMHGSE-----PPSRGKP-------PPPPSRTPAGPPPP--------- 373
Query: 387 MGPPPP 392
PPPP
Sbjct: 374 --PPPP 377
>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
sapiens]
Length = 871
Score = 49.7 bits (117), Expect = 5e-06
Identities = 29/70 (41%), Positives = 33/70 (47%), Gaps = 16/70 (22%)
Query: 335 LPPPPAAEEEASANYFNLPPSGPPAVVNIALPP----PPGIAPPPPPGFGPHMFHPMGPP 390
+PPP F PP PP + LPP PP I PP PPG P M PMG P
Sbjct: 2 MPPP-----------FMPPPGIPPPFPPMGLPPMSQRPPAI-PPMPPGILPPMLPPMGAP 49
Query: 391 PPFMRAPGPI 400
PP + PG +
Sbjct: 50 PPLTQIPGMV 59
Score = 35.0 bits (79), Expect = 0.13
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 327 PVPGLPGALPP---PPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHM 383
P PG+P PP PP ++ PP+ PP I P P + PPP P M
Sbjct: 8 PPPGIPPPFPPMGLPPMSQR---------PPAIPPMPPGILPPMLPPMGAPPPLTQIPGM 58
Query: 384 FHPMGP 389
PM P
Sbjct: 59 VPPMMP 64
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 49.3 bits (116), Expect = 7e-06
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 322 GIKLEPVPGLPGA--LPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP-------GIA 372
G+ + LPG +PPPP A +PP PP + +PPPP G+
Sbjct: 651 GVGIPSPSSLPGGTAIPPPPPLPGSA-----RIPPPPPPLPGSAGIPPPPPPLPGEAGMP 705
Query: 373 PPPPP-GFGPHMFHPMGPPPPFMRAPG 398
PPPPP GP + PPPPF PG
Sbjct: 706 PPPPPLPGGP----GIPPPPPFPGGPG 728
Score = 48.9 bits (115), Expect = 9e-06
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 20/96 (20%)
Query: 327 PVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP-------------GIAP 373
P+PG G PPPP EA +PP PP +PPPP G+
Sbjct: 684 PLPGSAGIPPPPPPLPGEAG-----MPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGM 738
Query: 374 PPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQR 409
PPPP FG + P P PF P ++ P +R
Sbjct: 739 PPPPPFGFGV--PAAPVLPFGLTPKKLYKPEVQLRR 772
Score = 42.4 bits (98), Expect = 8e-04
Identities = 38/109 (34%), Positives = 45/109 (41%), Gaps = 29/109 (26%)
Query: 322 GIKLEPVPGLPG--ALPPPPAAEEEASANYFNLPPSGP-PAVVNI----------ALPPP 368
G+ + P LPG A+ PPP +A+ +PP P P V I A+PPP
Sbjct: 615 GVCISSPPSLPGGTAISPPPPLSGDAT-----IPPPPPLPEGVGIPSPSSLPGGTAIPPP 669
Query: 369 PG------IAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMG 411
P I PPPPP G P PPPP PG P P G
Sbjct: 670 PPLPGSARIPPPPPPLPGSAGIPP--PPPPL---PGEAGMPPPPPPLPG 713
Score = 39.7 bits (91), Expect = 0.005
Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 6/107 (5%)
Query: 311 KEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPG 370
++ +K+ + S + P +P P PPA + PP P PPPP
Sbjct: 547 EDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPP 606
Query: 371 IAPPPPPGFGPHMFHPMGP------PPPFMRAPGPIHYPSQDPQRMG 411
PPP PG P P PPP + I P P+ +G
Sbjct: 607 PPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVG 653
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 49.3 bits (116), Expect = 7e-06
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 322 GIKLEPVPGLPGA--LPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP-------GIA 372
G+ + LPG +PPPP A +PP PP + +PPPP G+
Sbjct: 660 GVGIPSPSSLPGGTAIPPPPPLPGSA-----RIPPPPPPLPGSAGIPPPPPPLPGEAGMP 714
Query: 373 PPPPP-GFGPHMFHPMGPPPPFMRAPG 398
PPPPP GP + PPPPF PG
Sbjct: 715 PPPPPLPGGP----GIPPPPPFPGGPG 737
Score = 48.9 bits (115), Expect = 9e-06
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 20/96 (20%)
Query: 327 PVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP-------------GIAP 373
P+PG G PPPP EA +PP PP +PPPP G+
Sbjct: 693 PLPGSAGIPPPPPPLPGEAG-----MPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGM 747
Query: 374 PPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQR 409
PPPP FG + P P PF P ++ P +R
Sbjct: 748 PPPPPFGFGV--PAAPVLPFGLTPKKLYKPEVQLRR 781
Score = 42.4 bits (98), Expect = 8e-04
Identities = 38/109 (34%), Positives = 45/109 (41%), Gaps = 29/109 (26%)
Query: 322 GIKLEPVPGLPG--ALPPPPAAEEEASANYFNLPPSGP-PAVVNI----------ALPPP 368
G+ + P LPG A+ PPP +A+ +PP P P V I A+PPP
Sbjct: 624 GVCISSPPSLPGGTAISPPPPLSGDAT-----IPPPPPLPEGVGIPSPSSLPGGTAIPPP 678
Query: 369 PG------IAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMG 411
P I PPPPP G P PPPP PG P P G
Sbjct: 679 PPLPGSARIPPPPPPLPGSAGIPP--PPPPL---PGEAGMPPPPPPLPG 722
Score = 39.7 bits (91), Expect = 0.005
Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 6/107 (5%)
Query: 311 KEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPG 370
++ +K+ + S + P +P P PPA + PP P PPPP
Sbjct: 556 EDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPP 615
Query: 371 IAPPPPPGFGPHMFHPMGP------PPPFMRAPGPIHYPSQDPQRMG 411
PPP PG P P PPP + I P P+ +G
Sbjct: 616 PPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVG 662
>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
sapiens]
Length = 858
Score = 48.9 bits (115), Expect = 9e-06
Identities = 25/52 (48%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 353 PPSGPPAVVNIALPP----PPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPI 400
PP PP + LPP PP I PP PPG P M PMG PPP + PG +
Sbjct: 3 PPGIPPPFPPMGLPPMSQRPPAI-PPMPPGILPPMLPPMGAPPPLTQIPGMV 53
Score = 35.0 bits (79), Expect = 0.13
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 327 PVPGLPGALPP---PPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHM 383
P PG+P PP PP ++ PP+ PP I P P + PPP P M
Sbjct: 2 PPPGIPPPFPPMGLPPMSQR---------PPAIPPMPPGILPPMLPPMGAPPPLTQIPGM 52
Query: 384 FHPMGP 389
PM P
Sbjct: 53 VPPMMP 58
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 48.5 bits (114), Expect = 1e-05
Identities = 29/67 (43%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 327 PVPGLPGALPPPPAAEEEASANYFNL-PPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFH 385
P+PGLP PP+A +A + PP PP + LPPPP PPPP GP
Sbjct: 547 PLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGD--LPPPPPPPPPPPGTDGPVPPP 604
Query: 386 PMGPPPP 392
P PPPP
Sbjct: 605 PPPPPPP 611
Score = 47.0 bits (110), Expect = 3e-05
Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 15/55 (27%)
Query: 327 PVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGP 381
P P LPG LPPPP PP PP + +PPPP PPPPP GP
Sbjct: 576 PAPPLPGDLPPPP-------------PPPPPPPGTDGPVPPPP--PPPPPPPGGP 615
Score = 45.1 bits (105), Expect = 1e-04
Identities = 32/83 (38%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 326 EPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGI-APPPPPGFGPHMF 384
EP PG A PPPP S PPS PP PP PG PPP P +
Sbjct: 535 EPAPG--AAPPPPPPLPGLPSPQ--EAPPSAPPQA-----PPLPGSPEPPPAPPLPGDLP 585
Query: 385 HPMGPPPPFMRAPGPIHYPSQDP 407
P PPPP GP+ P P
Sbjct: 586 PPPPPPPPPPGTDGPVPPPPPPP 608
Score = 41.2 bits (95), Expect = 0.002
Identities = 26/62 (41%), Positives = 28/62 (45%), Gaps = 11/62 (17%)
Query: 329 PGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMG 388
P LPG+ PPPA +LPP PP PPPPG P PP P P G
Sbjct: 566 PPLPGSPEPPPAPPLPG-----DLPPPPPPP------PPPPGTDGPVPPPPPPPPPPPGG 614
Query: 389 PP 390
PP
Sbjct: 615 PP 616
Score = 35.8 bits (81), Expect = 0.075
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 335 LPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGF----GPHMFHPMGPP 390
LP A A +P P + A P PG APPPPP P P PP
Sbjct: 504 LPVAVATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPP 563
Query: 391 --PPFMRAPGP 399
PP +P P
Sbjct: 564 QAPPLPGSPEP 574
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 48.1 bits (113), Expect = 1e-05
Identities = 30/74 (40%), Positives = 33/74 (44%), Gaps = 17/74 (22%)
Query: 321 SGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAP--PPPPG 378
+G L P P P LPPP +A PP PP + N PP PG P PPPPG
Sbjct: 676 AGPPLPPPPPPPPPLPPPSSAGPP--------PPPPPPPLPNSPAPPNPGGPPPAPPPPG 727
Query: 379 FGPHMFHPMGPPPP 392
P PPPP
Sbjct: 728 LAP-------PPPP 734
Score = 47.0 bits (110), Expect = 3e-05
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 325 LEPVPGLPG----ALPPPPAA-----EEEASANYFNLPPSGPPAVVNIALPPPPGIAP-- 373
L+P+ G+ ALPPPPA+ + + P PP LPPPP P
Sbjct: 631 LQPMEGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPL 690
Query: 374 PPPPGFGPHMFHPMGPPPPFMRAPGP 399
PPP GP P PPPP +P P
Sbjct: 691 PPPSSAGP---PPPPPPPPLPNSPAP 713
Score = 40.4 bits (93), Expect = 0.003
Identities = 32/95 (33%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 327 PVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVV--NIALPPPPGIAPPPPPGFGPHMF 384
P+P G+L P P ++ PP PP + + A PPPP PPPP P
Sbjct: 657 PLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPP--PPPPPLPNSPAPP 714
Query: 385 HPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSS 419
+P GPPP AP P P + G SS
Sbjct: 715 NPGGPPP----APPPPGLAPPPPPGLFFGLGSSSS 745
Score = 36.2 bits (82), Expect = 0.057
Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 353 PPSGPPAVVNIALPPPPGIAPPPPP-GFGPHMFHPMGPPPPFMRAPGPIHYPSQDP 407
P G + ALPPPP PPPPP G P P PP P P+ P P
Sbjct: 633 PMEGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGP-PLPPPPPPP 687
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 48.1 bits (113), Expect = 1e-05
Identities = 36/92 (39%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSG---PPAVVNIALPPPP-----GIA 372
G + P P LPGA +PPPP LP +G PP + +PPPP GI
Sbjct: 1126 GAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIP 1185
Query: 373 PPPP-PGFGPHMFHPMGPPPPFMRAPGPIHYP 403
PPPP PG G P PP P P P P
Sbjct: 1186 PPPPLPGVGI----PPPPPLPGAGIPPPPPLP 1213
Score = 47.4 bits (111), Expect = 2e-05
Identities = 36/92 (39%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSG---PPAVVNIALPPPP-----GIA 372
G + P P LPGA +PPPP LP +G PP + +PPPP GI
Sbjct: 1049 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIP 1108
Query: 373 PPPP-PGFGPHMFHPMGPPPPFMRAPGPIHYP 403
PPPP PG G P PP P P P P
Sbjct: 1109 PPPPLPGAGI----PPPPPLPGAGIPPPPPLP 1136
Score = 46.6 bits (109), Expect = 4e-05
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSG---PPAVVNIALPPPPGI----AP 373
G + P P LPGA +PPPP LP +G PP + + +PPPP + P
Sbjct: 1060 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIP 1119
Query: 374 PPPPGFGPHMFHP-------MGPPPPFMRAPGP 399
PPPP G + P + PPPP R P
Sbjct: 1120 PPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIP 1152
Score = 46.6 bits (109), Expect = 4e-05
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSG---PPAVVNIALPPPPGI--A--P 373
G+ + P P LPGA +PPPP LP +G PP + + +PPPP + A P
Sbjct: 1104 GVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIP 1163
Query: 374 PPPPGFGPHMFHPMGPPPPFMRAPGPIHYP 403
PPPP G + P PP P + P P P
Sbjct: 1164 PPPPLPGAGI--PPPPPLPGVGIPPPPPLP 1191
Score = 46.6 bits (109), Expect = 4e-05
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 23/93 (24%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGI--A--PPPP 376
G + P P LPGA +PPPP +PP PP + + +PPPP + A PPPP
Sbjct: 1159 GAGIPPPPPLPGAGIPPPPPLPG------VGIPP--PPPLPGVGIPPPPPLPGAGIPPPP 1210
Query: 377 P----GFGPHMFHPMG------PPPPFMRAPGP 399
P G P P+ PPPP + GP
Sbjct: 1211 PLPGMGIPPAPAPPLPPPGTGIPPPPLLPVSGP 1243
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIA--PPPPPG 378
G + P+P LPGA +PPPP A +PP P I LPPP A PPPPP
Sbjct: 928 GAGILPLPPLPGAGIPPPPPLPGAA------IPPPPPLPGAGIPLPPPLPGAGIPPPPPL 981
Query: 379 FGPHMFHPMGPPPPFMRAPGPIHYP 403
G + P PP P P P P
Sbjct: 982 PGAGI--PPPPPLPGAGIPPPPPLP 1004
Score = 43.5 bits (101), Expect = 4e-04
Identities = 34/90 (37%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSG---PPAVVNIALPPPPGI--A--P 373
G + P P LPGA +PPPP LP +G PP + +PPPP + A P
Sbjct: 1027 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1086
Query: 374 PPPPGFGPHMFHPMGPPPPFMRAPGPIHYP 403
PPPP G + P PP P + P P P
Sbjct: 1087 PPPPLPGAGI--PPPPPLPGVGIPPPPPLP 1114
Score = 43.1 bits (100), Expect = 5e-04
Identities = 32/88 (36%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSG---PPAVVNIALPPPPGI--APPP 375
G + P P LPGA +PPPP LP +G PP + +PPPP + A P
Sbjct: 1038 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1097
Query: 376 PPGFGPHMFHPMGPPPPFMRAPGPIHYP 403
PP P + P PP P P P P
Sbjct: 1098 PPPPLPGVGIPPPPPLPGAGIPPPPPLP 1125
Score = 42.7 bits (99), Expect = 6e-04
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSG---PPAVVNIALPPPPGI--A--P 373
G + P P LPGA +PPPP LP +G PP + +PPPP + A P
Sbjct: 972 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1031
Query: 374 PPPPGFGPHMFHPMGPPPPFMRAPGPIHYP 403
PPPP G + P PP P P P P
Sbjct: 1032 PPPPLPGAGI--PPPPPLPGAGIPPPPPLP 1059
Score = 42.7 bits (99), Expect = 6e-04
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSG---PPAVVNIALPPPPGI--A--P 373
G + P P LPGA +PPPP LP +G PP + +PPPP + A P
Sbjct: 983 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1042
Query: 374 PPPPGFGPHMFHPMGPPPPFMRAPGPIHYP 403
PPPP G + P PP P P P P
Sbjct: 1043 PPPPLPGAGI--PPPPPLPGAGIPPPPPLP 1070
Score = 42.4 bits (98), Expect = 8e-04
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSG---PPAVVNIALPPPPGI--A--P 373
G + P P LPGA +PPPP LP +G PP + +PPPP + A P
Sbjct: 939 GAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 998
Query: 374 PPPPGFGPHMFHPMGPPPPFMRAPGPIHYP 403
PPPP G + P PP P P P P
Sbjct: 999 PPPPLPGAGI--PPPPPLPGAGIPPPPPLP 1026
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 336 PPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIA-PPPPPGFGPHMFHPMGPPPPFM 394
PP P E +S + P PP + + +P P A P PPP G M P PP P
Sbjct: 859 PPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGA 918
Query: 395 RAPGPIHYP 403
P P P
Sbjct: 919 GIPPPPPLP 927
Score = 39.3 bits (90), Expect = 0.007
Identities = 30/78 (38%), Positives = 35/78 (44%), Gaps = 20/78 (25%)
Query: 327 PVPGLPGA-LPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFH 385
P P LPGA +PPPP LP +G + LPP PG PPPP P
Sbjct: 911 PPPPLPGAGIPPPPP-----------LPGAGI-----LPLPPLPGAGIPPPP---PLPGA 951
Query: 386 PMGPPPPFMRAPGPIHYP 403
+ PPPP A P+ P
Sbjct: 952 AIPPPPPLPGAGIPLPPP 969
Score = 39.3 bits (90), Expect = 0.007
Identities = 33/90 (36%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 322 GIKLEPVPGLPGA-LPPPPAAEEEASANYFNLPPSG---PPAVVNIALPPPPGI--A--P 373
G + P P LPGA +P PP LP +G PP + +PPPP + A P
Sbjct: 950 GAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1009
Query: 374 PPPPGFGPHMFHPMGPPPPFMRAPGPIHYP 403
PPPP G + P PP P P P P
Sbjct: 1010 PPPPLPGAGI--PPPPPLPGAGIPPPPPLP 1037
Score = 38.1 bits (87), Expect = 0.015
Identities = 31/79 (39%), Positives = 36/79 (45%), Gaps = 19/79 (24%)
Query: 328 VPGLPG-ALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPP-----GIAP-PPPPGFG 380
VP LP A+P PP + LPP PP + +PPPP GI P PP PG G
Sbjct: 888 VPTLPSTAIPQPPPLQGTEM-----LPPP-PPPLPGAGIPPPPPLPGAGILPLPPLPGAG 941
Query: 381 PHMFHPMGPPPPFMRAPGP 399
+ PPPP A P
Sbjct: 942 ------IPPPPPLPGAAIP 954
Score = 35.0 bits (79), Expect = 0.13
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 311 KEKEKDGTTDSGI-KLEPVPGLPGALPPPPAAEEEASANYFN-LPPSGPPAVVNIAL--- 365
K + T + G+ L PV GLPG P PP AE + + + P +++ L
Sbjct: 742 KSIQTSPTEEGGVLTLPPVDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSH 801
Query: 366 PPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPI 400
P I+ PPPP P + G P + P I
Sbjct: 802 QPTQSISQPPPP---PSLLWSAGQGQPGSQPPHSI 833
Score = 31.6 bits (70), Expect = 1.4
Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 24/139 (17%)
Query: 291 LIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEE------- 343
LIV+ RR++V+ Q + + + + G PG+ PP + E
Sbjct: 787 LIVSPRRISVQLDSHQPTQSISQPPPPPS---LLWSAGQGQPGSQPPHSISTEFQTSHEH 843
Query: 344 ---EASANYFNLPPSGP-PAVVNIALPPPPGIAPPPPPGFGPHMFHPMGP------PPPF 393
A N N+P P P + + P G+ PPPPP P M P P PPP
Sbjct: 844 SVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPL-PGMTVPTLPSTAIPQPPPL 902
Query: 394 MRAPGPIHYPSQDPQRMGA 412
G P P GA
Sbjct: 903 Q---GTEMLPPPPPPLPGA 918
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.137 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,156,689
Number of Sequences: 37866
Number of extensions: 1518829
Number of successful extensions: 19658
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 992
Number of HSP's that attempted gapping in prelim test: 8863
Number of HSP's gapped (non-prelim): 6146
length of query: 420
length of database: 18,247,518
effective HSP length: 105
effective length of query: 315
effective length of database: 14,271,588
effective search space: 4495550220
effective search space used: 4495550220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.