SNRPC 29484

Name: SNRPC	Sequence: fasta or formatted (159aa)		NCBI GI: 4507127
Description: small nuclear ribonucleoprotein polypeptide C		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 9 2 C cysteine 1.9 3 1 D aspartate 3.8 6 1 E glutamate 1.9 3 2 F phenylalanine 1.9 3 1 G glycine 9.4 15 2 H histidine 3.1 5 1 I isoleucine 1.9 3 1 K lysine 5.0 8 1 L leucine 1.9 3 1 M methionine 13.8 22 2 N asparagine 0.6 1 1 P proline 25.2 40 4 Q glutamine 3.1 5 2 R arginine 5.7 9 1 S serine 3.8 6 1 T threonine 5.0 8 2 V valine 2.5 4 1 W tryptophan 0.6 1 1 Y tyrosine 3.1 5 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein polypeptide C LOC100129566 0.859 PREDICTED: hypothetical protein LOC100129566 LOC100129566 0.850 PREDICTED: hypothetical protein LOC100129566 LOC100129566 0.850 PREDICTED: hypothetical protein LOC100129566 WBP11 0.159 WW domain binding protein 11 ESX1 0.141 extraembryonic, spermatogenesis, homeobox 1-like [Ho... YLPM1 0.132 YLP motif containing 1 CPSF6 0.132 cleavage and polyadenylation specific factor 6, 68 ... SNRPB 0.132 small nuclear ribonucleoprotein polypeptide B/B' iso... SF3A2 0.126 splicing factor 3a, subunit 2 FMN2 0.117 formin 2 TCERG1 0.117 transcription elongation regulator 1 isoform 2 [Homo... TCERG1 0.117 transcription elongation regulator 1 isoform 1 [Homo... ZNF207 0.114 zinc finger protein 207 isoform a FMN1 0.111 formin 1 SNRPN 0.111 small nuclear ribonucleoprotein polypeptide N SNRPN 0.111 small nuclear ribonucleoprotein polypeptide N SNRPN 0.111 small nuclear ribonucleoprotein polypeptide N SNRPN 0.111 small nuclear ribonucleoprotein polypeptide N SNRPN 0.111 small nuclear ribonucleoprotein polypeptide N SNRPB 0.105 small nuclear ribonucleoprotein polypeptide B/B' isof... DIAPH2 0.102 diaphanous 2 isoform 12C DIAPH2 0.102 diaphanous 2 isoform 156 DIAPH1 0.102 diaphanous 1 isoform 2 DIAPH1 0.102 diaphanous 1 isoform 1 WAS 0.099 Wiskott-Aldrich syndrome protein NACA 0.099 nascent polypeptide-associated complex alpha subuni... WASL 0.096 Wiskott-Aldrich syndrome gene-like protein C6orf132 0.096 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.096 PREDICTED: chromosome 6 open reading frame 132 [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.