Guide to the Human Genome
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Name: TMEM132B Sequence: fasta or formatted (1078aa) NCBI GI: 89111953
Description:

transmembrane protein 132B

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         60           3
 C cysteine            1.4         15           1
 D aspartate           6.5         70           2
 E glutamate           8.0         86           3
 F phenylalanine       4.2         45           2
 G glycine             6.1         66           2
 H histidine           1.4         15           1
 I isoleucine          5.2         56           2
 K lysine              4.7         51           2
 L leucine             8.8         95           3
 M methionine          2.1         23           2
 N asparagine          3.8         41           2
 P proline             5.5         59           2
 Q glutamine           5.1         55           2
 R arginine            3.9         42           2
 S serine              9.4        101           3
 T threonine           6.4         69           2
 V valine              8.4         91           3
 W tryptophan          1.6         17           1
 Y tyrosine            1.9         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 132B 
TMEM132D              0.488   transmembrane protein 132D 
TMEM132C              0.442   transmembrane protein 132C 
TMEM132E              0.231   transmembrane protein 132E 
TMEM132A              0.221   transmembrane protein 132A isoform a 
TMEM132A              0.220   transmembrane protein 132A isoform b 
LOC121296             0.136   PREDICTED: similar to TMEM132B protein 
LOC121296             0.136   PREDICTED: similar to TMEM132B protein 
LOC121296             0.136   PREDICTED: hypothetical protein 
PAPOLA                0.005   poly(A) polymerase alpha 
RERE                  0.005   atrophin-1 like protein isoform b 
RERE                  0.005   atrophin-1 like protein isoform a 
RERE                  0.005   atrophin-1 like protein isoform a 
NBPF11                0.004   hypothetical protein LOC728912 
LOC200030             0.004   neuroblastoma breakpoint family, member 11-like [Ho...
KIAA0754              0.003   hypothetical protein LOC643314 
CHD7                  0.003   chromodomain helicase DNA binding protein 7 
NEFM                  0.003   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.003   neurofilament, medium polypeptide 150kDa isoform 2 ...
ZMYM4                 0.003   zinc finger protein 262 
MARCH10               0.003   ring finger protein 190 
MARCH10               0.003   ring finger protein 190 
CSGALNACT2            0.003   chondroitin sulfate N-acetylgalactosaminyltransferas...
SVIL                  0.003   supervillin isoform 2 
SNX27                 0.003   sorting nexin family member 27 
CMYA5                 0.003   cardiomyopathy associated 5 
APOB                  0.003   apolipoprotein B precursor 
RTN2                  0.003   reticulon 2 isoform A 
RTN2                  0.003   reticulon 2 isoform B 
TFDP2                 0.003   transcription factor Dp-2 (E2F dimerization partner 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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