Guide to the Human Genome
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Name: TMEM132A Sequence: fasta or formatted (1023aa) NCBI GI: 30089937
Description:

transmembrane protein 132A isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {1024aa} transmembrane protein 132A isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.9        112           2
 C cysteine            1.7         17           1
 D aspartate           3.6         37           2
 E glutamate           8.7         89           9
 F phenylalanine       2.2         23           1
 G glycine             8.5         87           4
 H histidine           2.6         27           2
 I isoleucine          1.5         15           1
 K lysine              2.0         20           2
 L leucine            10.7        109           3
 M methionine          1.0         10           1
 N asparagine          1.0         10           1
 P proline            10.1        103           2
 Q glutamine           3.9         40           2
 R arginine            7.3         75           2
 S serine              6.3         64           4
 T threonine           5.6         57           2
 V valine              9.2         94           3
 W tryptophan          2.1         21           2
 Y tyrosine            1.3         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 132A isoform b 
TMEM132A              0.998   transmembrane protein 132A isoform a 
TMEM132C              0.239   transmembrane protein 132C 
TMEM132D              0.237   transmembrane protein 132D 
TMEM132B              0.228   transmembrane protein 132B 
TMEM132E              0.184   transmembrane protein 132E 
LOC121296             0.020   PREDICTED: similar to TMEM132B protein 
LOC121296             0.020   PREDICTED: similar to TMEM132B protein 
LOC121296             0.020   PREDICTED: hypothetical protein 
PELP1                 0.011   proline, glutamic acid and leucine rich protein 1 [...
SCAF1                 0.010   SR-related CTD-associated factor 1 
ZFHX3                 0.010   AT-binding transcription factor 1 
CHIC1                 0.009   cysteine-rich hydrophobic domain 1 
PCGF6                 0.008   polycomb group ring finger 6 isoform a 
PCGF6                 0.008   polycomb group ring finger 6 isoform b 
MAP7                  0.008   microtubule-associated protein 7 
G3BP2                 0.007   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.007   Ras-GTPase activating protein SH3 domain-binding pro...
ZBTB3                 0.007   zinc finger and BTB domain containing 3 
SFPQ                  0.007   splicing factor proline/glutamine rich (polypyrimidin...
CSPG5                 0.007   chondroitin sulfate proteoglycan 5 (neuroglycan C) ...
SHROOM4               0.007   shroom family member 4 
MAP1A                 0.007   microtubule-associated protein 1A 
KLF13                 0.007   Kruppel-like factor 13 
ARHGAP17              0.006   nadrin isoform 1 
ARHGAP17              0.006   nadrin isoform 2 
RANGAP1               0.006   Ran GTPase activating protein 1 
NACA                  0.006   nascent polypeptide-associated complex alpha subuni...
SLC24A1               0.006   solute carrier family 24 (sodium/potassium/calcium ex...
CNGB1                 0.006   cyclic nucleotide gated channel beta 1 isoform a [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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