Guide to the Human Genome
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Name: SPRR2E Sequence: fasta or formatted (72aa) NCBI GI: 83582817
Description:

small proline-rich protein 2E

Referenced in:

Late Cornified Envelope Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           18.1         13           1
 D aspartate           0.0          0           0
 E glutamate           2.8          2           1
 F phenylalanine       0.0          0           0
 G glycine             0.0          0           0
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine             11.1          8           1
 L leucine             0.0          0           0
 M methionine          1.4          1           1
 N asparagine          0.0          0           0
 P proline            38.9         28           3
 Q glutamine          16.7         12           4
 R arginine            0.0          0           0
 S serine              4.2          3           1
 T threonine           2.8          2           1
 V valine              2.8          2           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   small proline-rich protein 2E 
SPRR2D                0.956   small proline-rich protein 2D 
SPRR2F                0.949   small proline-rich protein 2F 
SPRR2B                0.949   small proline-rich protein 2B 
SPRR2A                0.930   small proline-rich protein 2A 
SPRR2G                0.759   small proline-rich protein 2G 
SPRR1B                0.272   small proline-rich protein 1B 
SPRR1A                0.266   small proline-rich protein 1A 
LCE5A                 0.253   late cornified envelope 5A 
LOC100292632          0.241   PREDICTED: hypothetical protein 
LCE1A                 0.241   late cornified envelope 1A 
LCE1F                 0.241   late cornified envelope 1F 
LCE1E                 0.241   late cornified envelope 1E 
LCE1C                 0.241   late cornified envelope 1C 
LELP1                 0.222   late cornified envelope-like proline-rich 1 
SPRR4                 0.209   small proline-rich protein 4 
LCE2C                 0.190   late cornified envelope 2C 
LCE1D                 0.190   late cornified envelope 1D 
LCE2A                 0.184   late cornified envelope 2A 
LCE2B                 0.184   late cornified envelope 2B 
LCE2D                 0.184   late cornified envelope 2D 
LCE1B                 0.184   late cornified envelope 1B 
FMNL1                 0.171   formin-like 1 
LCE4A                 0.165   late cornified envelope 4A 
MLL4                  0.158   myeloid/lymphoid or mixed-lineage leukemia 4 
RIN3                  0.158   Ras and Rab interactor 3 
TBKBP1                0.152   TBK1 binding protein 1 
HTT                   0.152   huntingtin 
MYST3                 0.152   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.152   MYST histone acetyltransferase (monocytic leukemia)...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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