Guide to the Human Genome
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Name: SPRR2A Sequence: fasta or formatted (72aa) NCBI GI: 5174693
Description:

small proline-rich protein 2A

Referenced in:

Late Cornified Envelope Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           15.3         11           1
 D aspartate           0.0          0           0
 E glutamate           2.8          2           1
 F phenylalanine       0.0          0           0
 G glycine             0.0          0           0
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine             11.1          8           1
 L leucine             0.0          0           0
 M methionine          1.4          1           1
 N asparagine          0.0          0           0
 P proline            37.5         27           3
 Q glutamine          16.7         12           4
 R arginine            0.0          0           0
 S serine              5.6          4           1
 T threonine           2.8          2           1
 V valine              2.8          2           1
 W tryptophan          0.0          0           0
 Y tyrosine            4.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   small proline-rich protein 2A 
SPRR2B                0.987   small proline-rich protein 2B 
SPRR2D                0.942   small proline-rich protein 2D 
SPRR2E                0.942   small proline-rich protein 2E 
SPRR2F                0.891   small proline-rich protein 2F 
SPRR2G                0.769   small proline-rich protein 2G 
SPRR1A                0.269   small proline-rich protein 1A 
SPRR1B                0.256   small proline-rich protein 1B 
LOC100292632          0.244   PREDICTED: hypothetical protein 
LCE1A                 0.244   late cornified envelope 1A 
LCE1F                 0.244   late cornified envelope 1F 
LCE1E                 0.244   late cornified envelope 1E 
LCE5A                 0.244   late cornified envelope 5A 
LCE1C                 0.244   late cornified envelope 1C 
LCE2D                 0.231   late cornified envelope 2D 
LCE2A                 0.224   late cornified envelope 2A 
LCE1D                 0.192   late cornified envelope 1D 
LCE1B                 0.192   late cornified envelope 1B 
LELP1                 0.179   late cornified envelope-like proline-rich 1 
LCE2C                 0.173   late cornified envelope 2C 
SPRR4                 0.173   small proline-rich protein 4 
LCE4A                 0.167   late cornified envelope 4A 
LCE2B                 0.167   late cornified envelope 2B 
YLPM1                 0.160   YLP motif containing 1 
MYST3                 0.154   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.154   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.154   MYST histone acetyltransferase (monocytic leukemia)...
MLL4                  0.154   myeloid/lymphoid or mixed-lineage leukemia 4 
LOC645529             0.154   PREDICTED: similar to Putative acrosin-like proteas...
ACR                   0.154   acrosin precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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