Guide to the Human Genome
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Name: MT1E Sequence: fasta or formatted (61aa) NCBI GI: 83367075
Description:

metallothionein 1E

Referenced in:

Metallothioneins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8          6           1
 C cysteine           32.8         20           2
 D aspartate           1.6          1           1
 E glutamate           3.3          2           1
 F phenylalanine       0.0          0           0
 G glycine             9.8          6           2
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine             13.1          8           2
 L leucine             0.0          0           0
 M methionine          1.6          1           1
 N asparagine          1.6          1           1
 P proline             3.3          2           1
 Q glutamine           1.6          1           1
 R arginine            0.0          0           0
 S serine             13.1          8           1
 T threonine           4.9          3           1
 V valine              3.3          2           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metallothionein 1E 
MT1A                  0.952   metallothionein 1A 
MT2A                  0.952   metallothionein 2A 
MT1G                  0.937   metallothionein 1G 
MT1F                  0.937   metallothionein 1F 
MT1B                  0.929   metallothionein 1B 
MT1H                  0.929   metallothionein 1H 
MT1X                  0.905   metallothionein 1X 
MT1M                  0.873   metallothionein 1M 
MT3                   0.675   metallothionein 3 
MT4                   0.651   metallothionein 4 
KRTAP5-3              0.214   keratin associated protein 5-3 
KRTAP5-8              0.198   keratin associated protein 5-8 
KRTAP5-7              0.190   keratin associated protein 5-7 
KRTAP5-9              0.183   keratin associated protein 5-9 
KRTAP5-6              0.183   keratin associated protein 5-6 
KRTAP5-1              0.183   keratin associated protein 5-1 
KRTAP5-10             0.175   keratin associated protein 5-10 
KRTAP5-11             0.167   keratin associated protein 5-11 
KRTAP5-2              0.167   keratin associated protein 5-2 
KRTAP5-5              0.151   keratin associated protein 5-5 
KRTAP5-4              0.151   keratin associated protein 5-4 
KRTAP17-1             0.151   keratin associated protein 17-1 
KRTAP4-3              0.143   keratin associated protein 4-3 
KRTAP4-5              0.135   keratin associated protein 4-5 
KRTAP10-2             0.127   keratin associated protein 10-2 
LOC729815             0.119   PREDICTED: hypothetical protein 
KRTAP4-4              0.119   keratin associated protein 4.4 
KRTAP4-9              0.119   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.119   keratin associated protein 4-9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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