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Search of human proteins with 7705373
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7705373 LIM domain and actin binding 1 isoform b [Homo
sapiens]
(759 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7705373 LIM domain and actin binding 1 isoform b [Homo sapiens] 1517 0.0
gi|165905589 LIM domain and actin binding 1 isoform a [Homo sapi... 1509 0.0
gi|165905591 LIM domain and actin binding 1 isoform c [Homo sapi... 1192 0.0
gi|119372315 xin actin-binding repeat containing 2 isoform 2 [Ho... 221 1e-57
gi|13386490 LIM domain containing 2 [Homo sapiens] 141 3e-33
gi|209862793 microtubule associated monoxygenase, calponin and L... 71 4e-12
gi|170172518 microtubule associated monoxygenase, calponin and L... 65 2e-10
gi|209862789 microtubule associated monoxygenase, calponin and L... 65 2e-10
gi|7662284 microtubule associated monoxygenase, calponin and LIM... 65 3e-10
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 59 1e-08
gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens] 54 4e-07
gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens] 54 4e-07
gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo s... 54 7e-07
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 53 9e-07
gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens] 53 9e-07
gi|4503049 cysteine-rich protein 2 [Homo sapiens] 52 2e-06
gi|40804748 LIM and senescent cell antigen-like domains 2 isofor... 51 5e-06
gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo... 50 1e-05
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 50 1e-05
gi|205360947 microtubule associated monoxygenase, calponin and L... 49 1e-05
gi|226530313 microtubule associated monoxygenase, calponin and L... 49 1e-05
gi|116517305 cysteine-rich protein 3 [Homo sapiens] 49 2e-05
gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens] 47 5e-05
gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens] 47 5e-05
gi|5453710 LIM and SH3 protein 1 [Homo sapiens] 47 7e-05
gi|47087157 nebulette non-muscle isoform [Homo sapiens] 47 7e-05
gi|238859658 LIM and senescent cell antigen-like domains 2 isofo... 46 1e-04
gi|238776788 LIM and senescent cell antigen-like domains 2 isofo... 46 1e-04
gi|238776786 LIM and senescent cell antigen-like domains 2 isofo... 46 1e-04
gi|46049092 nebulin-related anchoring protein isoform C [Homo sa... 46 1e-04
>gi|7705373 LIM domain and actin binding 1 isoform b [Homo sapiens]
Length = 759
Score = 1517 bits (3927), Expect = 0.0
Identities = 759/759 (100%), Positives = 759/759 (100%)
Query: 1 MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL 60
MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL
Sbjct: 1 MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL 60
Query: 61 SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ 120
SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ
Sbjct: 61 SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ 120
Query: 121 EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN 180
EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN
Sbjct: 121 EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN 180
Query: 181 TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ 240
TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ
Sbjct: 181 TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ 240
Query: 241 LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI 300
LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI
Sbjct: 241 LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI 300
Query: 301 HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDSRDSQVKSEVQQPVHPKP 360
HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDSRDSQVKSEVQQPVHPKP
Sbjct: 301 HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDSRDSQVKSEVQQPVHPKP 360
Query: 361 LSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYC 420
LSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYC
Sbjct: 361 LSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYC 420
Query: 421 NNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPAQ 480
NNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPAQ
Sbjct: 421 NNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPAQ 480
Query: 481 LANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELGS 540
LANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELGS
Sbjct: 481 LANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELGS 540
Query: 541 SGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQST 600
SGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQST
Sbjct: 541 SGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQST 600
Query: 601 SVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKG 660
SVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKG
Sbjct: 601 SVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKG 660
Query: 661 ETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEFT 720
ETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEFT
Sbjct: 661 ETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEFT 720
Query: 721 TQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 759
TQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE
Sbjct: 721 TQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 759
>gi|165905589 LIM domain and actin binding 1 isoform a [Homo
sapiens]
Length = 760
Score = 1509 bits (3908), Expect = 0.0
Identities = 758/760 (99%), Positives = 758/760 (99%), Gaps = 1/760 (0%)
Query: 1 MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL 60
MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL
Sbjct: 1 MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL 60
Query: 61 SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ 120
SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ
Sbjct: 61 SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ 120
Query: 121 EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN 180
EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN
Sbjct: 121 EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN 180
Query: 181 TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ 240
TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ
Sbjct: 181 TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ 240
Query: 241 LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI 300
LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI
Sbjct: 241 LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI 300
Query: 301 HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDSR-DSQVKSEVQQPVHPK 359
HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDS DSQVKSEVQQPVHPK
Sbjct: 301 HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDSPGDSQVKSEVQQPVHPK 360
Query: 360 PLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSY 419
PLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSY
Sbjct: 361 PLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSY 420
Query: 420 CNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPA 479
CNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPA
Sbjct: 421 CNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPA 480
Query: 480 QLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELG 539
QLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELG
Sbjct: 481 QLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELG 540
Query: 540 SSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQS 599
SSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQS
Sbjct: 541 SSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQS 600
Query: 600 TSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESK 659
TSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESK
Sbjct: 601 TSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESK 660
Query: 660 GETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEF 719
GETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEF
Sbjct: 661 GETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEF 720
Query: 720 TTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 759
TTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE
Sbjct: 721 TTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 760
>gi|165905591 LIM domain and actin binding 1 isoform c [Homo
sapiens]
Length = 600
Score = 1192 bits (3084), Expect = 0.0
Identities = 598/600 (99%), Positives = 598/600 (99%), Gaps = 1/600 (0%)
Query: 161 MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS 220
MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS
Sbjct: 1 MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS 60
Query: 221 GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK 280
GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK
Sbjct: 61 GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK 120
Query: 281 QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE 340
QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE
Sbjct: 121 QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE 180
Query: 341 DDSR-DSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP 399
DDS DSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP
Sbjct: 181 DDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP 240
Query: 400 MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR 459
MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR
Sbjct: 241 MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR 300
Query: 460 PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE 519
PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE
Sbjct: 301 PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE 360
Query: 520 DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR 579
DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR
Sbjct: 361 DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR 420
Query: 580 RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA 639
RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA
Sbjct: 421 RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA 480
Query: 640 KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP 699
KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP
Sbjct: 481 KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP 540
Query: 700 QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 759
QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE
Sbjct: 541 QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 600
>gi|119372315 xin actin-binding repeat containing 2 isoform 2 [Homo
sapiens]
Length = 938
Score = 221 bits (564), Expect = 1e-57
Identities = 203/729 (27%), Positives = 308/729 (42%), Gaps = 157/729 (21%)
Query: 65 RKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQEEQI 124
+KG+L +L++KWE S + + HP SH + + + +
Sbjct: 5 QKGSLNLLRQKWE----------------SCDYQRSECHPR---DSHCTI-FQPQESKLL 44
Query: 125 HPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESK----KMENCLGESRHEVEKSEISEN 180
P + S P++L P+ GE++ E K K N R EV K + +
Sbjct: 45 APEGEVVSAPQSLDPTSLPY-STGEEMWSSKPEEKDSVDKSNNTREYGRPEVLKED---S 100
Query: 181 TDASGKIEKYNVPLNRLKMMFEKGEP---------TQTKILRAQSRSA------------ 219
+ +IE++++ L+ L+ +FE + + +I R+ A
Sbjct: 101 LSSRRRIERFSIALDELRSVFEAPKSGNKPAEYGGKEVEIERSLCSPAFKSHPGSQLEDS 160
Query: 220 ---SGRKISENSYSLDDLEIGPGQLSSSTFDSEKNES-------RRNLELPRLSET-SIK 268
S +K E S+ E G ++ +T K ES R + L E S+K
Sbjct: 161 VKDSDKKGKETSFDKMSPESGHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLK 220
Query: 269 DRMAKYQAAVSK---QSSSTNYTNELK---ASGGEIKIHKMEQKENVPP----------- 311
+RMA+YQAAVS+ +S S N E + GG K+ K + E
Sbjct: 221 ERMARYQAAVSRGDCRSFSANMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQH 280
Query: 312 -------------------GPEVCITHQEGEKISANE----NSLAVRSTPAEDDSRDSQV 348
E+ QEG K+ + ++ E+ ++ SQ
Sbjct: 281 QNRSEQEAIHSSQVGTSRSSQEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQF 340
Query: 349 KSEVQQPVHPKPLS---PDSRASSLSE-----------------SSPPKAMKKFQAPARE 388
VQ+ V P P L E ++P K +KK +E
Sbjct: 341 HQYVQETVIDTPEDEEIPKVSTKLLKEQFEKSAQEKILYSDKEMTTPAKQIKKLLLQDKE 400
Query: 389 TCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKS 448
C+ CQKTVYPME L+A++Q FH SCFRC +CN+KLSLG YASLHG+IYCKPHF QLFKS
Sbjct: 401 ICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLFKS 460
Query: 449 KGNYDEGFGHRPHKDLWASKNENEEI----LERPAQLANARETPHSPGVEDAPIAKVGVL 504
KGNYDEGFGH+ HKD W KN++ + E P N E PG + +
Sbjct: 461 KGNYDEGFGHKQHKDRWNCKNQSRSVDFIPNEEPNMCKNIAENTLVPGDRNEHLD----- 515
Query: 505 AASMEAKASSQQEKEDKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPE-DEIS 563
+ Q+ K E KL++ WPP E+ EE +KMSKPKWPPE +
Sbjct: 516 ----AGNSEGQRNDLRKLGERGKLKVIWPPSKEIPKKTLPFEEELKMSKPKWPPEMTTLL 571
Query: 564 KPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSE 623
PE + L+ + + ++ PF + QST V Q E
Sbjct: 572 SPEFKSESLLEDVRTPENKGQRQDHFPF-LQPYLQSTHVC-----------------QKE 613
Query: 624 ESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENG 683
+ +G + E K E K KK G+ Q++ S+ E K +++ +N N++
Sbjct: 614 DVIG--IKEMKMPEGRKDEKKE---GRKNVQDRPSEAEDTKSNRKSAMDLNDNNNVIVQS 668
Query: 684 ADSDEDDNS 692
A+ ++++ +
Sbjct: 669 AEKEKNEKT 677
>gi|13386490 LIM domain containing 2 [Homo sapiens]
Length = 127
Score = 141 bits (355), Expect = 3e-33
Identities = 63/98 (64%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 373 SSPPKAMKKF--QAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYA 430
SS + K F +A +ETC CQKTVYPMERL+A++ +FH SCF C +C+ KLSLG+YA
Sbjct: 21 SSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYA 80
Query: 431 SLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASK 468
+LHG YCKPHF QLFKSKGNYDEGFG + HK+LWA K
Sbjct: 81 ALHGEFYCKPHFQQLFKSKGNYDEGFGRKQHKELWAHK 118
>gi|209862793 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 2 [Homo sapiens]
Length = 1073
Score = 70.9 bits (172), Expect = 4e-12
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 347 QVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLAN 406
Q+ +++Q+ PK L S+ + P +TC CQK VY MERL A
Sbjct: 851 QIANQLQRKEQPKALLDKKELGSMKKEFPQNL------GGSDTCYFCQKRVYVMERLSAE 904
Query: 407 QQVFHISCFRCSYCNNKLSLGTYA--SLHGRIYCKPHF 442
+ FH SCF+C YC L L YA G+ YCKPH+
Sbjct: 905 GKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 942
>gi|170172518 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 3 [Homo sapiens]
Length = 966
Score = 65.5 bits (158), Expect = 2e-10
Identities = 30/57 (52%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 388 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYA--SLHGRIYCKPHF 442
+TC CQK VY MERL A + FH SCF+C YC L L YA G+ YCKPH+
Sbjct: 762 DTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 818
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 65.5 bits (158), Expect = 2e-10
Identities = 30/57 (52%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 388 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYA--SLHGRIYCKPHF 442
+TC CQK VY MERL A + FH SCF+C YC L L YA G+ YCKPH+
Sbjct: 762 DTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 818
>gi|7662284 microtubule associated monoxygenase, calponin and LIM
domain containing 2 [Homo sapiens]
Length = 1124
Score = 64.7 bits (156), Expect = 3e-10
Identities = 49/149 (32%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 364 DSRASSLSESSPPKAMKK---FQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYC 420
D R + + S ++M+K +TC C+K VY MERL A FH CFRCS C
Sbjct: 973 DHRPKAQATSPDLESMRKSFPLNLGGSDTCYFCKKRVYVMERLSAEGHFFHRECFRCSIC 1032
Query: 421 NNKLSLGTYA--SLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERP 478
L L Y G+ YCKPHF K N + K K + EE
Sbjct: 1033 ATTLRLAAYTFDCDEGKFYCKPHF---IHCKTN------SKQRKRRAELKQQREEEATWQ 1083
Query: 479 AQLANARETPHSPGVEDAPIAKVGVLAAS 507
Q A R+TP +A +G L S
Sbjct: 1084 EQEAPRRDTPTE---SSCAVAAIGTLEGS 1109
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 59.3 bits (142), Expect = 1e-08
Identities = 68/265 (25%), Positives = 99/265 (37%), Gaps = 34/265 (12%)
Query: 334 VRSTPAEDDSRDSQVKSEVQQ-------PVHPKPLSPDS------RASSLSESSPPKAMK 380
V+ + + S K+ VQ P PLSP R + + PPK +
Sbjct: 118 VKRASEDSEEEPSGKKAPVQAAKLPSPAPARKPPLSPAQTNPVVQRRNEGAGGPPPKTDQ 177
Query: 381 KFQAP-ARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASL--HGRIY 437
TC C K V+ ++R LA+ +++H SCFRC C+ L G Y + G
Sbjct: 178 ALAGSLVSSTCGVCGKHVHLVQRHLADGRLYHRSCFRCKQCSCTLHSGAYKATGEPGTFV 237
Query: 438 CKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPAQLAN-ARETPHSPGVEDA 496
C H + G P + + + AQ AN AR + P ++
Sbjct: 238 CTSHLPAAASASPKLT---GLVPRQPGAMGVDSRTSCSPQKAQEANKARPSAWEPAAGNS 294
Query: 497 PIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTE------------LGSSGSA 544
P A+ V AA A S+ PA + R+A P PTE +G S +A
Sbjct: 295 P-ARASVPAAPNPAATSATSVHVRSPARPSESRLA-PTPTEGKVRPRVTNSSPMGWSSAA 352
Query: 545 LEEGIKMSKPKWPPEDEISKPEVPE 569
S P PP +P P+
Sbjct: 353 PCTAAAASHPAVPPSAPDPRPATPQ 377
>gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 54.3 bits (129), Expect = 4e-07
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 358 PKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRC 417
PKP A S++ S+P K KF E C C K+VY E+++ + +H +CFRC
Sbjct: 96 PKP------ARSVTTSNPSKFTAKFGES--EKCPRCGKSVYAAEKVMGGGKPWHKTCFRC 147
Query: 418 SYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFG 457
+ C L G +YCK + + F G GFG
Sbjct: 148 AICGKSLESTNVTDKDGELYCKVCYAKNFGPTG---IGFG 184
Score = 53.9 bits (128), Expect = 5e-07
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 449
C C+KTVY E + N + FH +CF C C L T A+ IYCK + + + K
Sbjct: 10 CGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPK 69
Query: 450 G-NYDEGFG 457
G Y +G G
Sbjct: 70 GIGYGQGAG 78
>gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 54.3 bits (129), Expect = 4e-07
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 358 PKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRC 417
PKP A S++ S+P K KF E C C K+VY E+++ + +H +CFRC
Sbjct: 96 PKP------ARSVTTSNPSKFTAKFGES--EKCPRCGKSVYAAEKVMGGGKPWHKTCFRC 147
Query: 418 SYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFG 457
+ C L G +YCK + + F G GFG
Sbjct: 148 AICGKSLESTNVTDKDGELYCKVCYAKNFGPTG---IGFG 184
Score = 53.9 bits (128), Expect = 5e-07
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 449
C C+KTVY E + N + FH +CF C C L T A+ IYCK + + + K
Sbjct: 10 CGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPK 69
Query: 450 G-NYDEGFG 457
G Y +G G
Sbjct: 70 GIGYGQGAG 78
>gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 53.5 bits (127), Expect = 7e-07
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 388 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFK 447
E C C + VY E+++ + +H +CFRC+ C L T A G IYCK + + F
Sbjct: 117 ERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFG 176
Query: 448 SKG-NYDEGFGHRPHKD 463
KG + +G G H +
Sbjct: 177 PKGFGFGQGAGALVHSE 193
Score = 49.7 bits (117), Expect = 1e-05
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 449
C CQKTVY E + FH SCF C C L T A IYCK + + + K
Sbjct: 10 CGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPK 69
Query: 450 G-NYDEGFG 457
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 53.1 bits (126), Expect = 9e-07
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 16/182 (8%)
Query: 356 VHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCF 415
V P P+ P+ A SS + + TC CQ+ V+ ++R LA+ +++H CF
Sbjct: 130 VAPTPVEPEDVAQGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCF 189
Query: 416 RCSYCNNKLSLGTYAS--LHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEE 473
RC C++ L G Y + G C H +L + G RP + ++
Sbjct: 190 RCRRCSSTLLPGAYENGPEEGTFVCAEHCARLGPGTRS-----GTRPGPFSQPKQQHQQQ 244
Query: 474 ILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWP 533
+ E +A++ P AP G A +A ++ + KP KL+
Sbjct: 245 LAE------DAKDVPGGGPSSSAP---AGAEADGPKASPEARPQIPTKPRVPGKLQELAS 295
Query: 534 PP 535
PP
Sbjct: 296 PP 297
>gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens]
Length = 193
Score = 53.1 bits (126), Expect = 9e-07
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 388 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFK 447
E C C +VY E+++ + +H +CFRC+ C L T G IYCK + + F
Sbjct: 117 EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFG 176
Query: 448 SKG-NYDEGFGHRPH 461
KG Y +G G H
Sbjct: 177 PKGFGYGQGAGALVH 191
Score = 46.2 bits (108), Expect = 1e-04
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 449
C C +TVY E + + + FH CF C C L T A IYCK + + + K
Sbjct: 10 CGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPK 69
Query: 450 G-NYDEGFG 457
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|4503049 cysteine-rich protein 2 [Homo sapiens]
Length = 208
Score = 52.4 bits (124), Expect = 2e-06
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 363 PDSRASSLSESSPPKAMKKFQAPAR-----ETCVECQKTVYPMERLLANQQVFHISCFRC 417
P +RA S PPK + + TC C K VY E++ + + +H C RC
Sbjct: 94 PAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRC 153
Query: 418 SYCNNKLSLGTYASLHGRIYC-KPHFNQLFKSKG 450
C L+ G +A G+ YC KP + LF KG
Sbjct: 154 ERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
Score = 47.8 bits (112), Expect = 4e-05
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYC-KPHFNQLFKS 448
C +C KTVY E++ + + +H C +C C+ L+ G +A G+ +C KP + LF
Sbjct: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
Query: 449 KGNYDEGFGHRPHKDLWASKNENEEILERPAQLANARETPHSP 491
KG G G ++ A + +E PA A R+ P
Sbjct: 65 KGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPP 107
>gi|40804748 LIM and senescent cell antigen-like domains 2 isoform 2
[Homo sapiens]
Length = 365
Score = 50.8 bits (120), Expect = 5e-06
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 372 ESSPPKAMKKFQAPARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYA 430
+S PP A A C CQ P ER++ +N +++H CF C+ C G +
Sbjct: 21 QSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFY 80
Query: 431 SLHGRIYCKPHFNQLF 446
GR YC+ F LF
Sbjct: 81 EFEGRKYCEHDFQMLF 96
Score = 32.0 bits (71), Expect = 2.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 390 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 446
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 222 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 277
Score = 30.4 bits (67), Expect = 6.4
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 410 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 452
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 119 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 162
>gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo
sapiens]
Length = 140
Score = 49.7 bits (117), Expect = 1e-05
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 449
C CQKTVY E + FH SCF C C L T A IYCK + + + K
Sbjct: 10 CGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPK 69
Query: 450 G-NYDEGFG 457
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 49.7 bits (117), Expect = 1e-05
Identities = 79/335 (23%), Positives = 135/335 (40%), Gaps = 69/335 (20%)
Query: 65 RKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQEEQI 124
+KG+L +L++KWE S + + HP SH + + + +
Sbjct: 5 QKGSLNLLRQKWE----------------SCDYQRSECHPR---DSHCTI-FQPQESKLL 44
Query: 125 HPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESK----KMENCLGESRHEVEKSEISEN 180
P + S P++L P+ GE++ E K K N R EV K + +
Sbjct: 45 APEGEVVSAPQSLDPTSLPY-STGEEMWSSKPEEKDSVDKSNNTREYGRPEVLKED---S 100
Query: 181 TDASGKIEKYNVPLNRLKMMFEKGEP---------TQTKILRAQSRSA------------ 219
+ +IE++++ L+ L+ +FE + + +I R+ A
Sbjct: 101 LSSRRRIERFSIALDELRSVFEAPKSGNKPAEYGGKEVEIERSLCSPAFKSHPGSQLEDS 160
Query: 220 ---SGRKISENSYSLDDLEIGPGQLSSSTFDSEKNES-------RRNLELPRLSET-SIK 268
S +K E S+ E G ++ +T K ES R + L E S+K
Sbjct: 161 VKDSDKKGKETSFDKMSPESGHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLK 220
Query: 269 DRMAKYQAAVSK---QSSSTNYTNELK---ASGGEIKIHKMEQKENVPPG---PEVCITH 319
+RMA+YQAAVS+ +S S N E + GG K+ K + E + H
Sbjct: 221 ERMARYQAAVSRGDCRSFSANMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQH 280
Query: 320 QEGEKISANENSLAVRSTPAEDDSRDSQVKSEVQQ 354
Q + A +S S +++ +R+ Q S+VQ+
Sbjct: 281 QNRSEQEAIHSSQVGTSRSSQEMARNEQEGSKVQK 315
Score = 36.6 bits (83), Expect = 0.089
Identities = 123/667 (18%), Positives = 242/667 (36%), Gaps = 105/667 (15%)
Query: 83 AESHTDSLRN---SSTEIRHRADHPPAEVTSHAASGAKADQEEQIHPRSRLRSPPEALVQ 139
+ HT++ +N S + R + A SH G A +++QI P + S PE+
Sbjct: 2471 SSEHTETKQNVISKSLDERKQLSIDSANCLSHTVPGTSAPRKKQIAPLIKSHSFPES--- 2527
Query: 140 GRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKM 199
G+ K + E ++ +K EI + S YN+ +K
Sbjct: 2528 -------SGQQNPKPYMRKFKTPLMIAEEKYRQQKEEIEKQKQES---SYYNI----VKT 2573
Query: 200 MFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLEL 259
+ T+ + ++ +S ++ PG S++ ++++ +
Sbjct: 2574 QSQNQHITEVEKEMPLQKTNEEVSLSGIDSECTVVQPSPGSQSNARILGVCSDNQLSTTS 2633
Query: 260 PR----------LSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKIHKMEQKENV 309
P L+ + KD+M K S+ + E+K S E + +QK+ +
Sbjct: 2634 PETVAAKRLHHVLAASEDKDKMKKEVLQSSRDIMQSKSACEIKQSHQECSTQQTQQKKYL 2693
Query: 310 P----PGPEVCITHQEGEKISANENSLAVRSTPAEDDSRDSQVKSEVQQPVHPKPL-SPD 364
P + + + + I + T +S Q + +VQ + L +
Sbjct: 2694 EQLHLPQSKPISPNFKVKTIKLPTLDHTLNETDHSYESHKQQSEIDVQTFTKKQYLKTKK 2753
Query: 365 SRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKL 424
+ AS+ A + +Q P +E V Q P E + NQ+ +KL
Sbjct: 2754 TEASTECSHKQSLAERHYQLPKKEKRVTVQ---LPTESIQKNQE-------------DKL 2797
Query: 425 SLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPAQ-LAN 483
+ P + F G P + KN+ ++ R + L
Sbjct: 2798 KM------------VPRKQREFSGSDR-----GKLPGSE---EKNQGPSMIGRKEERLIT 2837
Query: 484 ARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELGSSGS 543
R+ H + K V+ A ++++ + Q+ + + AE+K P P
Sbjct: 2838 ERKHEHLKNKSAPKVVKQKVIDAHLDSQTQNFQQTQIQTAESKAEHKKLPQPYNSLQEEK 2897
Query: 544 ALE-EGIKMSKPKWPPEDEISKPEVPEDVDL--DLKKLRRSSS---------LKER---- 587
LE +GI+ + +D SK E+ ++ +K+ +R L++R
Sbjct: 2898 CLEVKGIQEKQVFSNTKD--SKQEITQNKSFFSSVKESQRDDGKGALNIVEFLRKREELQ 2955
Query: 588 ---SRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAE------RKQVEN 638
SR A + +K+ +T+ I GW +SE E E ++++ +
Sbjct: 2956 QILSRVKQFEAEPNKSGLKTFQTLLNTI-PGWLISEDKREYAVHIAMENNLEKVKEEITH 3014
Query: 639 AKASKKNGNVG-KTTWQNKESKGETGKRSKEGHSLEMENENL----VENGADSDEDDNSF 693
K ++ V + Q +TGK + SL+ + + V N +S++ +N
Sbjct: 3015 IKTQAEDMLVSYENIIQTAMMSSKTGKPGNKPTSLDETSSKVSNVHVSNNKNSEQKENKI 3074
Query: 694 LKQQSPQ 700
K+++ Q
Sbjct: 3075 AKEKTVQ 3081
>gi|205360947 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 1 [Homo sapiens]
Length = 1067
Score = 49.3 bits (116), Expect = 1e-05
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 6/123 (4%)
Query: 335 RSTPAEDDSRDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQ 394
R+ +D+ +++ E++ + PD +PP + +A A + C C
Sbjct: 646 RAKENAEDAGGKKLRLEMEAETPSTEVPPDPEPGV--PLTPPSQHQ--EAGAGDLCALCG 701
Query: 395 KTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASL--HGRIYCKPHFNQLFKSKGNY 452
+ +Y +ERL N FH SCFRC C L G Y G YC H Q
Sbjct: 702 EHLYVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQTDHKAEGS 761
Query: 453 DEG 455
D G
Sbjct: 762 DRG 764
>gi|226530313 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 2 [Homo sapiens]
Length = 981
Score = 49.3 bits (116), Expect = 1e-05
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 6/123 (4%)
Query: 335 RSTPAEDDSRDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQ 394
R+ +D+ +++ E++ + PD +PP + +A A + C C
Sbjct: 560 RAKENAEDAGGKKLRLEMEAETPSTEVPPDPEPGV--PLTPPSQHQ--EAGAGDLCALCG 615
Query: 395 KTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASL--HGRIYCKPHFNQLFKSKGNY 452
+ +Y +ERL N FH SCFRC C L G Y G YC H Q
Sbjct: 616 EHLYVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQTDHKAEGS 675
Query: 453 DEG 455
D G
Sbjct: 676 DRG 678
>gi|116517305 cysteine-rich protein 3 [Homo sapiens]
Length = 204
Score = 48.5 bits (114), Expect = 2e-05
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 355 PVHPKPLSPDSRASSLSES--SPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHI 412
P+ P SP + L + SPP MK F C C + VY E++++ + +H
Sbjct: 89 PLSPSSFSPPRPRTGLPQGKKSPPH-MKTFTGET-SLCPGCGEPVYFAEKVMSLGRNWHR 146
Query: 413 SCFRCSYCNNKLSLGTYASLHGRIYCK-PHFNQLFKSKG 450
C RC C+ L+ G++A G YC P + LF KG
Sbjct: 147 PCLRCQRCHKTLTAGSHAEHDGVPYCHVPCYGYLFGPKG 185
Score = 47.0 bits (110), Expect = 7e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 389 TCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYC-KPHFNQLFK 447
TC CQ+ V+ E++ + + +H C +C C++ LS G +A +GR YC KP + LF
Sbjct: 4 TCPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCYGALFG 63
Query: 448 SKGNYDEGFG 457
+G G G
Sbjct: 64 PRGVNIGGVG 73
>gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens]
Length = 374
Score = 47.4 bits (111), Expect = 5e-05
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 356 VHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLL-ANQQVFHISC 414
V P PL P E PP A + + + C C KTV P E + A ++ +H C
Sbjct: 154 VQPGPLRPMEE-----ELPPPPAEPVEKGASTDICAFCHKTVSPRELAVEAMKRQYHAQC 208
Query: 415 FRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDE 454
F C C +L+ ++ GR C+P + + G E
Sbjct: 209 FTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTLERCGKCGE 248
>gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]
Length = 373
Score = 47.4 bits (111), Expect = 5e-05
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 356 VHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLL-ANQQVFHISC 414
V P PL P E PP A + + + C C KTV P E + A ++ +H C
Sbjct: 154 VQPGPLRPMEE-----ELPPPPAEPVEKGASTDICAFCHKTVSPRELAVEAMKRQYHAQC 208
Query: 415 FRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDE 454
F C C +L+ ++ GR C+P + + G E
Sbjct: 209 FTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTLERCGKCGE 248
>gi|5453710 LIM and SH3 protein 1 [Homo sapiens]
Length = 261
Score = 47.0 bits (110), Expect = 7e-05
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF-NQLFKS 448
C C K VYP E++ + +H +CF C C L++ Y + YC H+ Q F
Sbjct: 5 CARCGKIVYPTEKVNCLDKFWHKACFHCETCKMTLNMKNYKGYEKKPYCNAHYPKQSFTM 64
Query: 449 KGNYDEGFGHRPHKDLWASKNENEE 473
+ E + +L + EE
Sbjct: 65 VADTPENLRLKQQSELQSQVRYKEE 89
>gi|47087157 nebulette non-muscle isoform [Homo sapiens]
Length = 270
Score = 47.0 bits (110), Expect = 7e-05
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 442
C C K VYP E++ + +H CF C C L++ Y + YC H+
Sbjct: 5 CARCGKVVYPTEKVNCLDKYWHKGCFHCEVCKMALNMNNYKGYEKKPYCNAHY 57
>gi|238859658 LIM and senescent cell antigen-like domains 2 isoform
1 [Homo sapiens]
Length = 363
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 384 APARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 442
A A C CQ P ER++ +N +++H CF C+ C G + GR YC+ F
Sbjct: 31 ALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 90
Query: 443 NQLF 446
LF
Sbjct: 91 QMLF 94
Score = 32.0 bits (71), Expect = 2.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 390 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 446
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 220 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 275
Score = 30.4 bits (67), Expect = 6.4
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 410 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 452
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 117 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 160
>gi|238776788 LIM and senescent cell antigen-like domains 2 isoform
5 [Homo sapiens]
Length = 336
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 384 APARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 442
A A C CQ P ER++ +N +++H CF C+ C G + GR YC+ F
Sbjct: 4 ALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 63
Query: 443 NQLF 446
LF
Sbjct: 64 QMLF 67
Score = 32.0 bits (71), Expect = 2.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 390 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 446
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 193 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 248
Score = 30.4 bits (67), Expect = 6.4
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 410 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 452
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 90 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 133
>gi|238776786 LIM and senescent cell antigen-like domains 2 isoform
3 [Homo sapiens]
Length = 341
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 384 APARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 442
A A C CQ P ER++ +N +++H CF C+ C G + GR YC+ F
Sbjct: 9 ALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 68
Query: 443 NQLF 446
LF
Sbjct: 69 QMLF 72
Score = 32.0 bits (71), Expect = 2.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 390 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 446
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 198 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 253
Score = 30.4 bits (67), Expect = 6.4
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 410 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 452
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 95 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 138
>gi|46049092 nebulin-related anchoring protein isoform C [Homo
sapiens]
Length = 1695
Score = 46.2 bits (108), Expect = 1e-04
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 388 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPH 441
+ C C VYP E++ Q++H +CF C C LS+ + S + YC H
Sbjct: 4 QPCSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCHAH 57
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.123 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,114,239
Number of Sequences: 37866
Number of extensions: 1499282
Number of successful extensions: 5952
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 368
Number of HSP's that attempted gapping in prelim test: 5233
Number of HSP's gapped (non-prelim): 1119
length of query: 759
length of database: 18,247,518
effective HSP length: 110
effective length of query: 649
effective length of database: 14,082,258
effective search space: 9139385442
effective search space used: 9139385442
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.