| Name: RABGEF1 | Sequence: fasta or formatted (491aa) | NCBI GI: 7657496 | |
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Description: RAB guanine nucleotide exchange factor (GEF) 1
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.7 28 2 C cysteine 2.6 13 2 D aspartate 5.9 29 2 E glutamate 9.6 47 4 F phenylalanine 3.7 18 2 G glycine 3.5 17 1 H histidine 1.2 6 1 I isoleucine 6.5 32 2 K lysine 9.6 47 2 L leucine 7.1 35 2 M methionine 2.4 12 1 N asparagine 3.7 18 1 P proline 5.1 25 3 Q glutamine 6.5 32 1 R arginine 5.7 28 2 S serine 6.9 34 2 T threonine 4.9 24 2 V valine 4.7 23 2 W tryptophan 1.2 6 1 Y tyrosine 3.5 17 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 RAB guanine nucleotide exchange factor (GEF) 1 GAPVD1 0.063 GTPase activating protein and VPS9 domains 1 ANKRD27 0.043 ankyrin repeat domain 27 (VPS9 domain) RIN3 0.035 Ras and Rab interactor 3 RIN2 0.034 Ras and Rab interactor 2 RIN1 0.029 ras inhibitor RIN1 ZFAND5 0.021 zinc finger, AN1-type domain 5 ZFAND5 0.021 zinc finger, AN1-type domain 5 ZFAND5 0.021 zinc finger, AN1-type domain 5 ZFAND6 0.019 zinc finger, AN1-type domain 6 C16orf7 0.018 chromosome 16 open reading frame 7 FAM186A 0.015 family with sequence similarity 186, member A [Homo... LOC283685 0.014 PREDICTED: golgi autoantigen, golgin subfamily a-li... FAM133A 0.014 hypothetical protein LOC286499 MAP7D2 0.014 MAP7 domain containing 2 ALS2 0.014 alsin isoform 1 USP8 0.012 ubiquitin specific peptidase 8 USP8 0.012 ubiquitin specific peptidase 8 USP8 0.012 ubiquitin specific peptidase 8 MAP7D1 0.012 MAP7 domain containing 1 LOC727832 0.011 golgi autoantigen, golgin subfamily a-like LOC645202 0.011 PREDICTED: hypothetical protein LOC645202 OTUD7B 0.011 zinc finger protein Cezanne FAM133B 0.011 hypothetical protein LOC257415 isoform 2 FAM133B 0.011 hypothetical protein LOC257415 isoform 1 LOC651807 0.010 PREDICTED: hypothetical protein LOC440243 0.010 PREDICTED: Putative golgin subfamily A member 6-lik... EHMT2 0.010 euchromatic histone-lysine N-methyltransferase 2 is... FER 0.010 fer (fps/fes related) tyrosine kinase GOLGB1 0.010 golgi autoantigen, golgin subfamily b, macrogolgin ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
