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Search of human proteins with 72534652
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|72534652 runt-related transcription factor 3 isoform 1 [Homo
sapiens]
(429 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|72534652 runt-related transcription factor 3 isoform 1 [Homo ... 877 0.0
gi|4757918 runt-related transcription factor 3 isoform 2 [Homo s... 839 0.0
gi|19923198 runt-related transcription factor 1 isoform AML1c [H... 492 e-139
gi|49574546 runt-related transcription factor 1 isoform AML1b [H... 476 e-134
gi|226442791 runt-related transcription factor 2 isoform b [Homo... 473 e-133
gi|226442783 runt-related transcription factor 2 isoform a [Homo... 437 e-123
gi|66934969 runt-related transcription factor 2 isoform c [Homo ... 426 e-119
gi|169790837 runt-related transcription factor 1 isoform AML1a [... 324 8e-89
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 42 0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.004
gi|56549696 E1A binding protein p400 [Homo sapiens] 40 0.005
gi|206597509 HIV-1 Rev binding protein isoform 4 [Homo sapiens] 40 0.005
gi|38570132 HIV-1 Rev binding protein isoform 2 [Homo sapiens] 40 0.005
gi|116284392 mucin 2 precursor [Homo sapiens] 39 0.009
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 39 0.009
gi|110431352 transducer of regulated CREB protein 3 isoform b [H... 39 0.012
gi|110431354 transducer of regulated CREB protein 3 isoform a [H... 39 0.012
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 39 0.012
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 38 0.015
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 38 0.020
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 38 0.020
gi|161019170 mucin 5AC [Homo sapiens] 37 0.026
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 37 0.026
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 37 0.034
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 37 0.034
gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo s... 37 0.034
gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo s... 37 0.034
gi|5031887 LIM domain containing preferred translocation partner... 37 0.045
gi|55750053 atrophin-1 [Homo sapiens] 36 0.059
gi|55750041 atrophin-1 [Homo sapiens] 36 0.059
>gi|72534652 runt-related transcription factor 3 isoform 1 [Homo
sapiens]
Length = 429
Score = 877 bits (2267), Expect = 0.0
Identities = 429/429 (100%), Positives = 429/429 (100%)
Query: 1 MASNSIFDSFPTYSPTFIRDPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGG 60
MASNSIFDSFPTYSPTFIRDPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGG
Sbjct: 1 MASNSIFDSFPTYSPTFIRDPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGG 60
Query: 61 RARPEVRSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTV 120
RARPEVRSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTV
Sbjct: 61 RARPEVRSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTV 120
Query: 121 VTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATY 180
VTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATY
Sbjct: 121 VTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATY 180
Query: 181 HRAIKVTVDGPREPRRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFS 240
HRAIKVTVDGPREPRRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFS
Sbjct: 181 HRAIKVTVDGPREPRRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFS 240
Query: 241 SQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSG 300
SQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSG
Sbjct: 241 SQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSG 300
Query: 301 TSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMV 360
TSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMV
Sbjct: 301 TSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMV 360
Query: 361 AGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGR 420
AGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGR
Sbjct: 361 AGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGR 420
Query: 421 MDEAVWRPY 429
MDEAVWRPY
Sbjct: 421 MDEAVWRPY 429
>gi|4757918 runt-related transcription factor 3 isoform 2 [Homo
sapiens]
Length = 415
Score = 839 bits (2168), Expect = 0.0
Identities = 410/410 (100%), Positives = 410/410 (100%)
Query: 20 DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLADHAGE 79
DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLADHAGE
Sbjct: 6 DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLADHAGE 65
Query: 80 LVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNAS 139
LVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNAS
Sbjct: 66 LVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNAS 125
Query: 140 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQ 199
AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQ
Sbjct: 126 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQ 185
Query: 200 KLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDP 259
KLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDP
Sbjct: 186 KLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDP 245
Query: 260 RQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHH 319
RQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHH
Sbjct: 246 RQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHH 305
Query: 320 TYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCT 379
TYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCT
Sbjct: 306 TYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCT 365
Query: 380 SSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 429
SSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY
Sbjct: 366 SSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 415
>gi|19923198 runt-related transcription factor 1 isoform AML1c [Homo
sapiens]
Length = 480
Score = 492 bits (1266), Expect = e-139
Identities = 282/499 (56%), Positives = 332/499 (66%), Gaps = 89/499 (17%)
Query: 1 MASNSIFDSFPTYSPTFIR-------------DPSTSRRFTPPSPAFPCGGGGGKMGENS 47
MAS+SIF+SFP+Y F+R D STSRRFTPPS A GKM E
Sbjct: 1 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTAL----SPGKMSEAL 56
Query: 48 GALSAQAAVGPGGRARPEVRSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAF 107
+ A G+ R RSMV+VLADH GELVRTDSPNFLCSVLP+HWRCNKTLP+AF
Sbjct: 57 PLGAPDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAF 116
Query: 108 KVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLT 167
KVVALGDVPDGT+VTVMAGNDENYSAELRNA+A MKNQVARFNDLRFVGRSGRGKSFTLT
Sbjct: 117 KVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLT 176
Query: 168 ITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKP----FPDRFGDLERLR---M 220
ITVFTNP QVATYHRAIK+TVDGPREPRRHRQKL+DQTKP F +R +LE+LR M
Sbjct: 177 ITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAM 236
Query: 221 RVTP----STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSF---------- 266
RV+P TP+PR SL+ ++ F+ QPQ+ +Q T ++ P S P +D+S+
Sbjct: 237 RVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQP-SPPWSYDQSYQYLGSIASPS 295
Query: 267 --------------------------PTLPTLT----ESRFP------DPRMHYPGAMSA 290
T P LT +FP DPRMHYPG
Sbjct: 296 VHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPG---- 351
Query: 291 AFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGT 350
AF YS TP TS + ++ M + +R+ HTYLPPPYPG+ Q Q GPFQA+ YHLYYG
Sbjct: 352 AFTYSPTPV-TSGIGIGMSAMGSATRY-HTYLPPPYPGSSQAQGGPFQASSPSYHLYYGA 409
Query: 351 SSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSN 410
S+GSYQFSMV GG+RSP R+L CT+++ A L+NPSL QSD VEA+GSHSN
Sbjct: 410 SAGSYQFSMV-----GGERSPPRILPPCTNASTGSA---LLNPSLPNQSDVVEAEGSHSN 461
Query: 411 SPTALSTPGRMDEAVWRPY 429
SPT ++ R++EAVWRPY
Sbjct: 462 SPTNMAPSARLEEAVWRPY 480
>gi|49574546 runt-related transcription factor 1 isoform AML1b [Homo
sapiens]
Length = 453
Score = 476 bits (1226), Expect = e-134
Identities = 270/467 (57%), Positives = 316/467 (67%), Gaps = 76/467 (16%)
Query: 20 DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLADHAGE 79
D STSRRFTPPS A GKM E + A G+ R RSMV+VLADH GE
Sbjct: 6 DASTSRRFTPPSTAL----SPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPGE 61
Query: 80 LVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNAS 139
LVRTDSPNFLCSVLP+HWRCNKTLP+AFKVVALGDVPDGT+VTVMAGNDENYSAELRNA+
Sbjct: 62 LVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNAT 121
Query: 140 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQ 199
A MKNQVARFNDLRFVGRSGRGKSFTLTITVFTNP QVATYHRAIK+TVDGPREPRRHRQ
Sbjct: 122 AAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQ 181
Query: 200 KLEDQTKP----FPDRFGDLERLR---MRVTP----STPSPRGSLSTTSHFSSQPQTPIQ 248
KL+DQTKP F +R +LE+LR MRV+P TP+PR SL+ ++ F+ QPQ+ +Q
Sbjct: 182 KLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQ 241
Query: 249 GTSELNPFSDPRQFDRSF------------------------------------PTLPTL 272
T ++ P S P +D+S+ T P L
Sbjct: 242 DTRQIQP-SPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRLSTAPDL 300
Query: 273 T----ESRFP------DPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYL 322
T +FP DPRMHYPG AF YS TP TS + ++ M + +R+ HTYL
Sbjct: 301 TAFSDPRQFPALPSISDPRMHYPG----AFTYSPTPV-TSGIGIGMSAMGSATRY-HTYL 354
Query: 323 PPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSA 382
PPPYPG+ Q Q GPFQA+ YHLYYG S+GSYQFSMV GG+RSP R+L CT+++
Sbjct: 355 PPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMV-----GGERSPPRILPPCTNAS 409
Query: 383 ASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 429
A L+NPSL QSD VEA+GSHSNSPT ++ R++EAVWRPY
Sbjct: 410 TGSA---LLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY 453
>gi|226442791 runt-related transcription factor 2 isoform b [Homo
sapiens]
Length = 499
Score = 473 bits (1216), Expect = e-133
Identities = 289/526 (54%), Positives = 330/526 (62%), Gaps = 124/526 (23%)
Query: 1 MASNSIFDSFPTYSPTFIRDPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQ------- 53
MASNS+F + F DPSTSRRF+PPS + GKM + S ++AQ
Sbjct: 1 MASNSLFSTVTPCQQNFFWDPSTSRRFSPPSSSLQ----PGKMSDVSPVVAAQQQQQQQQ 56
Query: 54 ----------------------------AAVGPGGRARP--EVRSMVDVLADHAGELVRT 83
AA R RP + R+MV+++ADH ELVRT
Sbjct: 57 QQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPPHDNRTMVEIIADHPAELVRT 116
Query: 84 DSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMK 143
DSPNFLCSVLPSHWRCNKTLPVAFKVVALG+VPDGTVVTVMAGNDENYSAELRNASAVMK
Sbjct: 117 DSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMK 176
Query: 144 NQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLED 203
NQVARFNDLRFVGRSGRGKSFTLTITVFTNP QVATYHRAIKVTVDGPREPRRHRQKL+D
Sbjct: 177 NQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRRHRQKLDD 236
Query: 204 QTKP--FPDRFGDLERL---RMRVTPSTPSPRGSL-STTSHFSSQPQ------------- 244
+KP F DR DL R+ MRV +PR SL S S F+ Q Q
Sbjct: 237 -SKPSLFSDRLSDLGRIPHPSMRVGVPPQNPRPSLNSAPSPFNPQGQSQITDPRQAQSSP 295
Query: 245 -----------------------TPIQGT------------------SELNPFSDPRQFD 263
TP+ T SEL PFSDPRQ
Sbjct: 296 PWSYDQSYPSYLSQMTSPSIHSTTPLSSTRGTGLPAITDVPRRISGASELGPFSDPRQ-- 353
Query: 264 RSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLP 323
FP++ +LTESRF +PRMHYP A F Y TP TS SL GM AT+ + HTYLP
Sbjct: 354 --FPSISSLTESRFSNPRMHYP----ATFTY--TPPVTSGMSL---GMSATTHY-HTYLP 401
Query: 324 PPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAA 383
PPYPG+ Q+QSGPFQ + +PY LYYGTSSGSYQF MV GGDRSP+RML CT+++
Sbjct: 402 PPYPGSSQSQSGPFQTSSTPY-LYYGTSSGSYQFPMV----PGGDRSPSRMLPPCTTTS- 455
Query: 384 SVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 429
L+NP+L Q+DGV+ADGSHS+SPT L++ GRMDE+VWRPY
Sbjct: 456 --NGSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMDESVWRPY 499
>gi|226442783 runt-related transcription factor 2 isoform a [Homo
sapiens]
Length = 521
Score = 437 bits (1124), Expect = e-123
Identities = 277/542 (51%), Positives = 322/542 (59%), Gaps = 134/542 (24%)
Query: 1 MASNSIFDSFPTYSPTFIRDPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQ------- 53
MASNS+F + F DPSTSRRF+PPS + GKM + S ++AQ
Sbjct: 1 MASNSLFSTVTPCQQNFFWDPSTSRRFSPPSSSLQ----PGKMSDVSPVVAAQQQQQQQQ 56
Query: 54 ----------------------------AAVGPGGRARP--EVRSMVDVLADHAGELVRT 83
AA R RP + R+MV+++ADH ELVRT
Sbjct: 57 QQQQQQQQQQQQQQQEAAAAAAAAAAAAAAAAAVPRLRPPHDNRTMVEIIADHPAELVRT 116
Query: 84 DSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMK 143
DSPNFLCSVLPSHWRCNKTLPVAFKVVALG+VPDGTVVTVMAGNDENYSAELRNASAVMK
Sbjct: 117 DSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMK 176
Query: 144 NQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLED 203
NQVARFNDLRFVGRSGRGKSFTLTITVFTNP QVATYHRAIKVTVDGPREPRRHRQKL+D
Sbjct: 177 NQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRRHRQKLDD 236
Query: 204 QTKP--FPDRFGDLERL---RMRVTPSTPSPRGSL-STTSHFSSQPQTPIQGTSELNPFS 257
+KP F DR DL R+ MRV +PR SL S S F+ Q Q+ I + S
Sbjct: 237 -SKPSLFSDRLSDLGRIPHPSMRVGVPPQNPRPSLNSAPSPFNPQGQSQITDPRQAQS-S 294
Query: 258 DPRQFDRSFPT-----------------------LPTLTE-------------------- 274
P +D+S+P+ LP +T+
Sbjct: 295 PPWSYDQSYPSYLSQMTSPSIHSTTPLSSTRGTGLPAITDVPRRISDDDTATSDFCLWPS 354
Query: 275 -------------SRFPDPRMHYPGAMS--------------AAFPYSATPSGTSISSLS 307
F DPR +P S A F Y TP TS SL
Sbjct: 355 TLSKKSQAGASELGPFSDPR-QFPSISSLTESRFSNPRMHYPATFTY--TPPVTSGMSL- 410
Query: 308 VAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGG 367
GM AT+ + HTYLPPPYPG+ Q+QSGPFQ + +PY LYYGTSSGSYQF MV GG
Sbjct: 411 --GMSATTHY-HTYLPPPYPGSSQSQSGPFQTSSTPY-LYYGTSSGSYQFPMV----PGG 462
Query: 368 DRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWR 427
DRSP+RML CT+++ L+NP+L Q+DGV+ADGSHS+SPT L++ GRMDE+VWR
Sbjct: 463 DRSPSRMLPPCTTTS---NGSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMDESVWR 519
Query: 428 PY 429
PY
Sbjct: 520 PY 521
>gi|66934969 runt-related transcription factor 2 isoform c [Homo
sapiens]
Length = 507
Score = 426 bits (1095), Expect = e-119
Identities = 270/523 (51%), Positives = 313/523 (59%), Gaps = 134/523 (25%)
Query: 20 DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQ-------------------------- 53
DPSTSRRF+PPS + GKM + S ++AQ
Sbjct: 6 DPSTSRRFSPPSSSLQ----PGKMSDVSPVVAAQQQQQQQQQQQQQQQQQQQQQQQEAAA 61
Query: 54 ---------AAVGPGGRARP--EVRSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKT 102
AA R RP + R+MV+++ADH ELVRTDSPNFLCSVLPSHWRCNKT
Sbjct: 62 AAAAAAAAAAAAAAVPRLRPPHDNRTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKT 121
Query: 103 LPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGK 162
LPVAFKVVALG+VPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGK
Sbjct: 122 LPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGK 181
Query: 163 SFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKP--FPDRFGDLERL-- 218
SFTLTITVFTNP QVATYHRAIKVTVDGPREPRRHRQKL+D +KP F DR DL R+
Sbjct: 182 SFTLTITVFTNPPQVATYHRAIKVTVDGPREPRRHRQKLDD-SKPSLFSDRLSDLGRIPH 240
Query: 219 -RMRVTPSTPSPRGSL-STTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPT-------- 268
MRV +PR SL S S F+ Q Q+ I + S P +D+S+P+
Sbjct: 241 PSMRVGVPPQNPRPSLNSAPSPFNPQGQSQITDPRQAQS-SPPWSYDQSYPSYLSQMTSP 299
Query: 269 ---------------LPTLTE---------------------------------SRFPDP 280
LP +T+ F DP
Sbjct: 300 SIHSTTPLSSTRGTGLPAITDVPRRISDDDTATSDFCLWPSTLSKKSQAGASELGPFSDP 359
Query: 281 RMHYPGAMS--------------AAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPY 326
R +P S A F Y TP TS SL GM AT+ + HTYLPPPY
Sbjct: 360 R-QFPSISSLTESRFSNPRMHYPATFTY--TPPVTSGMSL---GMSATTHY-HTYLPPPY 412
Query: 327 PGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVA 386
PG+ Q+QSGPFQ + +PY LYYGTSSGSYQF MV GGDRSP+RML CT+++
Sbjct: 413 PGSSQSQSGPFQTSSTPY-LYYGTSSGSYQFPMV----PGGDRSPSRMLPPCTTTS---N 464
Query: 387 AGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 429
L+NP+L Q+DGV+ADGSHS+SPT L++ GRMDE+VWRPY
Sbjct: 465 GSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMDESVWRPY 507
>gi|169790837 runt-related transcription factor 1 isoform AML1a
[Homo sapiens]
Length = 250
Score = 324 bits (831), Expect = 8e-89
Identities = 171/240 (71%), Positives = 191/240 (79%), Gaps = 15/240 (6%)
Query: 20 DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLADHAGE 79
D STSRRFTPPS A GKM E + A G+ R RSMV+VLADH GE
Sbjct: 6 DASTSRRFTPPSTAL----SPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPGE 61
Query: 80 LVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNAS 139
LVRTDSPNFLCSVLP+HWRCNKTLP+AFKVVALGDVPDGT+VTVMAGNDENYSAELRNA+
Sbjct: 62 LVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNAT 121
Query: 140 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQ 199
A MKNQVARFNDLRFVGRSGRGKSFTLTITVFTNP QVATYHRAIK+TVDGPREPRRHRQ
Sbjct: 122 AAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQ 181
Query: 200 KLEDQTKP----FPDRFGDLERLR---MRVTP----STPSPRGSLSTTSHFSSQPQTPIQ 248
KL+DQTKP F +R +LE+LR MRV+P TP+PR SL+ ++ F+ QPQ+ +Q
Sbjct: 182 KLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQ 241
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 42.0 bits (97), Expect = 0.001
Identities = 59/216 (27%), Positives = 73/216 (33%), Gaps = 35/216 (16%)
Query: 223 TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDR----------SFPTLPTL 272
+P+ P RG L HF P S +P S P Q + + P
Sbjct: 942 SPAPPGARGGLGLPEHFLPPP------PSSRSPSSSPGQLGQPPGELSLGLATGPLSTPE 995
Query: 273 TESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPAT--------SRFHHTYLPP 324
T R P+P GA A P TP G G P T S H + L P
Sbjct: 996 TPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLP 1055
Query: 325 PYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAAS 384
P P Q + P L G + + + + D + T AS SS S
Sbjct: 1056 PASSPPPPQVPQRRGTPP---LTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSSGES 1112
Query: 385 VAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGR 420
+AA L P GG S G S S L PGR
Sbjct: 1113 MAAFPLF-PRAGGGSGG-------SGSSGGLGPPGR 1140
Score = 30.0 bits (66), Expect = 4.2
Identities = 40/149 (26%), Positives = 58/149 (38%), Gaps = 30/149 (20%)
Query: 283 HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 342
H+P +A F P G+ + +L P + + +P G+ S P Q +
Sbjct: 797 HHPRLPAAIF---RPPPGSGLGNLGAGQTPRHLKRLQSLIPSAL-GSASPASSPSQVDTP 852
Query: 343 PYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGV 402
SS S+ +AG S+ SP +L S +SS A G +PS S GV
Sbjct: 853 --------SSSSFHIQQLAGFSAPAGLSP--LLPSSSSSPPPGACG---SPSAPTPSAGV 899
Query: 403 EA-------------DGSHSNSPTALSTP 418
A GS S+S + L TP
Sbjct: 900 AATTIAGFGHFHKALGGSLSSSDSPLLTP 928
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.0 bits (92), Expect = 0.004
Identities = 49/213 (23%), Positives = 78/213 (36%), Gaps = 31/213 (14%)
Query: 191 PREPRRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGT 250
PR P +++ +T P L+R R R PS PS S + S
Sbjct: 2383 PRVPLSAYERVSGRTSP-----PLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQ 2437
Query: 251 SELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAG 310
S L P D + R P P + + S+SS +VA
Sbjct: 2438 SLLPPAQD---------------QPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVAT 2482
Query: 311 MPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRS 370
+++ H+ L P PG P + G A S+G+ Q S +A +R
Sbjct: 2483 TTSSAGDHNGMLSVPAPGVPHSDVGEPPA-----------STGAQQPSALAALQPAKERR 2531
Query: 371 PTRMLASCTSSAASVAAGNLMNPSLGGQSDGVE 403
+ +S +SS++S ++ + + S G S E
Sbjct: 2532 SSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSE 2564
Score = 31.6 bits (70), Expect = 1.4
Identities = 47/204 (23%), Positives = 77/204 (37%), Gaps = 17/204 (8%)
Query: 202 EDQTK-PFPDRFGDLER-LRMRVTPSTPSPR---GSLSTTSHFSSQ---------PQTPI 247
+DQ + P P F D R L + TP S G+++TT+ + P P
Sbjct: 2444 QDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPH 2503
Query: 248 QGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPS--GTSISS 305
E P S Q + L E R + S++ S++ S G+S S
Sbjct: 2504 SDVGE-PPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSD 2562
Query: 306 LSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSS 365
+ +P +P P P + P+P +SS S S + SSS
Sbjct: 2563 SEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSS 2622
Query: 366 GGDRSPTRMLASCTSSAASVAAGN 389
S + +S +SS++S ++ +
Sbjct: 2623 SSSSSSSSSSSSSSSSSSSSSSSS 2646
Score = 31.2 bits (69), Expect = 1.9
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 221 RVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLT------- 273
R + S+ S S S++S SS + +S+ S P Q + + +P+ T
Sbjct: 2531 RSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAV 2590
Query: 274 -ESRFPDP------RMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPY 326
E R P+P R + S++ S++ S +S SS S + ++S + P
Sbjct: 2591 REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650
Query: 327 PGAPQNQSGPFQANP 341
P P Q+ P A+P
Sbjct: 2651 PAKPGPQALPKPASP 2665
Score = 28.9 bits (63), Expect = 9.4
Identities = 54/237 (22%), Positives = 88/237 (37%), Gaps = 58/237 (24%)
Query: 219 RMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFP 278
RM P+ P P SL T + + P + +N S + PT L +SR P
Sbjct: 2207 RMSQVPA-PVPLMSLRTAPAANLASRIPAASAAAMNLASARTP---AIPTAVNLADSRTP 2262
Query: 279 -----------------------DPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATS 315
DPR P A + + TP+ + SL+ +G P T+
Sbjct: 2263 AAAAAMNLASPRTAVAPSAVNLADPRT--PTAPAVNLAGARTPAALAALSLTGSGTPPTA 2320
Query: 316 RFHHTYLPPPYPGAPQNQSGPFQAN-PSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRM 374
+ + P A N GP A+ +P + +AGS + +P
Sbjct: 2321 ANYPSSSRTPQAPASANLVGPRSAHATAPVN--------------IAGSRTAAALAP--- 2363
Query: 375 LASCTSS--AASVAAGNLMNP--------SLGGQSDGVEADGSHSNSPTALSTPGRM 421
AS TS+ A +++ NL +P + G++ D + S +P + + RM
Sbjct: 2364 -ASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRM 2419
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 39.7 bits (91), Expect = 0.005
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 209 PDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPT 268
P ++G R PST PR + TT+ S+ PQ P++G + FS + +
Sbjct: 1429 PVQYGQKPEGRTVAFPSTHPPRTAAPTTA--SAAPQGPLRGRPPIATFSANPEAKAAAAP 1486
Query: 269 LPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPG 328
T +++ PR H P + S+ A P+ + + A P PPP P
Sbjct: 1487 FQT-SQASASAPR-HQPASASSTAASPAHPAKLRAQTTAQASTPGQ--------PPPQPQ 1536
Query: 329 APQNQSG 335
AP + +G
Sbjct: 1537 APSHAAG 1543
>gi|206597509 HIV-1 Rev binding protein isoform 4 [Homo sapiens]
Length = 522
Score = 39.7 bits (91), Expect = 0.005
Identities = 50/210 (23%), Positives = 75/210 (35%), Gaps = 16/210 (7%)
Query: 204 QTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQT-PIQGTSELNPFSDPRQF 262
Q+ D++ L L + + S ST++ S+ T P+ +++ P S
Sbjct: 326 QSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPASS---- 381
Query: 263 DRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYL 322
S P T S P P S+ P+ G + ++ A M + F
Sbjct: 382 --SVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFG---T 436
Query: 323 PPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSA 382
P PY P + SG FQ P + + Q AG ++ G P T
Sbjct: 437 PAPY-SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPV-----VTPFG 490
Query: 383 ASVAAGNLMNPSLGGQSDGVEADGSHSNSP 412
AAG NP + G G GS S +P
Sbjct: 491 QVAAAGVSSNPFMTGAPTGQFPTGSSSTNP 520
>gi|38570132 HIV-1 Rev binding protein isoform 2 [Homo sapiens]
Length = 562
Score = 39.7 bits (91), Expect = 0.005
Identities = 50/210 (23%), Positives = 75/210 (35%), Gaps = 16/210 (7%)
Query: 204 QTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQT-PIQGTSELNPFSDPRQF 262
Q+ D++ L L + + S ST++ S+ T P+ +++ P S
Sbjct: 366 QSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPASS---- 421
Query: 263 DRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYL 322
S P T S P P S+ P+ G + ++ A M + F
Sbjct: 422 --SVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFG---T 476
Query: 323 PPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSA 382
P PY P + SG FQ P + + Q AG ++ G P T
Sbjct: 477 PAPY-SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPV-----VTPFG 530
Query: 383 ASVAAGNLMNPSLGGQSDGVEADGSHSNSP 412
AAG NP + G G GS S +P
Sbjct: 531 QVAAAGVSSNPFMTGAPTGQFPTGSSSTNP 560
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 38.9 bits (89), Expect = 0.009
Identities = 55/215 (25%), Positives = 83/215 (38%), Gaps = 54/215 (25%)
Query: 222 VTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPT------LPTLTES 275
VTP TP+P G+ + T+ TPI T+ + P P PT + LT S
Sbjct: 4161 VTP-TPTPTGTQTPTT-------TPITTTTTVTPTPTPTGTQTGPPTHTSTAPIAELTTS 4212
Query: 276 RFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVA-GMPATSRFHHTYLPPPYPGAPQNQS 334
P + S + P T S T +S+L A M +T+ PP P AP S
Sbjct: 4213 NPPPESSTPQTSRSTSSPL--TESTTLLSTLPPAIEMTSTA-------PPSTPTAPTTTS 4263
Query: 335 GPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPS 394
G +P P +++ S + G+++G +PT T+++A
Sbjct: 4264 GGHTLSPPP------STTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSA----------- 4306
Query: 395 LGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 429
+ +PT LSTP + RPY
Sbjct: 4307 -------------WTPTPTPLSTPSIIRTTGLRPY 4328
Score = 34.7 bits (78), Expect = 0.17
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 11/121 (9%)
Query: 223 TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 282
T +TPSP +TT ++ P P T+ P + P + T PT T + P
Sbjct: 1582 TTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTP 1641
Query: 283 HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 342
P + P + TPS + ++ S P T+ T PPP S P PS
Sbjct: 1642 SPPPTTTTTPPPTTTPSPPTTTTPS---PPITT----TTTPPP----TTTPSSPITTTPS 1690
Query: 343 P 343
P
Sbjct: 1691 P 1691
Score = 32.0 bits (71), Expect = 1.1
Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 7/124 (5%)
Query: 225 STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHY 284
+TPSP + +TT ++ P PI T+ P + P S T P T + P
Sbjct: 1420 TTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSP-PISTTTTPPPTTTPSPPTTTPS 1478
Query: 285 PGAMSAAFP--YSATPSGTSISSLSVAGMPATSRFHHTYLPP---PYPGAPQNQSGPFQA 339
P + + P + TP T+ S P T T LPP P P + P
Sbjct: 1479 PPTTTPSPPTTTTTTPPPTTTPSPPTT-TPITPPASTTTLPPTTTPSPPTTTTTTPPPTT 1537
Query: 340 NPSP 343
PSP
Sbjct: 1538 TPSP 1541
Score = 31.6 bits (70), Expect = 1.4
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Query: 223 TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 282
+P T +P +T S ++ TP T+ P + P S TLP T P
Sbjct: 1471 SPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTT 1530
Query: 283 HYPGAMSAAFPYSATP-----SGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPF 337
P + P + TP S T++ + P T+ T PPP S P
Sbjct: 1531 TTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT----TTTPPP----TTTPSPPT 1582
Query: 338 QANPSP 343
PSP
Sbjct: 1583 TTTPSP 1588
Score = 30.4 bits (67), Expect = 3.2
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 14/125 (11%)
Query: 223 TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 282
TP TP + +TT ++ P P T+ P + P + P+ PT+T + P
Sbjct: 1545 TPITPP---TSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTT 1601
Query: 283 HYPGAMSAAF-PYSATPSGTSISSLSVAGMPATSRFHHTYLPP---PYPGAPQNQSGPFQ 338
P + P + TPS + + ++ P TS T LPP P P + P
Sbjct: 1602 PSPPTTTTTTPPPTTTPSPPTTTPIT----PPTST---TTLPPTTTPSPPPTTTTTPPPT 1654
Query: 339 ANPSP 343
PSP
Sbjct: 1655 TTPSP 1659
Score = 29.6 bits (65), Expect = 5.5
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 223 TPS-TPSPRGSLSTTSHFSSQPQTPIQGTS--ELNPFSDPRQ 261
TPS TP+P S T S SS P P GT E F PRQ
Sbjct: 4379 TPSPTPTPSKSTPTPSKPSSTPSKPTPGTKPPECPDFDPPRQ 4420
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 38.9 bits (89), Expect = 0.009
Identities = 57/208 (27%), Positives = 73/208 (35%), Gaps = 42/208 (20%)
Query: 223 TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 282
T TP P SL TT SQ TP S P S P S T T +
Sbjct: 1981 TSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTT------- 2033
Query: 283 HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 342
GA + ATPS T + +P T+ T P PG +
Sbjct: 2034 ---GATGSV----ATPSSTP-GTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTT 2085
Query: 343 PYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDG- 401
P T+ G S V SS G +L T++ +VA G++ PS Q+ G
Sbjct: 2086 P------TTRG----STVTPSSIPGTTHTATVL---TTTTTTVATGSMATPSSSTQTSGT 2132
Query: 402 ----------VEADGSHSNSPTALSTPG 419
+ A GS +N STPG
Sbjct: 2133 PPSLTTTATTITATGSTTNPS---STPG 2157
Score = 37.0 bits (84), Expect = 0.034
Identities = 56/238 (23%), Positives = 82/238 (34%), Gaps = 51/238 (21%)
Query: 225 STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFD-----RSFPTLPTLTE-SRFP 278
+T S + + T H S+ TP +S+ PFS P RS T PT T + P
Sbjct: 2485 ATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIP 2544
Query: 279 DPRMHY-----------PGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 327
+ MS A P S+TP S++ T P P
Sbjct: 2545 SSSLGTTWTRLSQTTTPTATMSTATP-SSTPETVHTSTVLTTTATTTGATGSVATPSSTP 2603
Query: 328 GAPQN---------------QSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 372
G S P A P + T+ + ++ S G +PT
Sbjct: 2604 GTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPT 2663
Query: 373 RMLASCTSSAASVAAGNLMNPSLGGQSDG-----------VEADGSHSNSPTALSTPG 419
+ T++ +VA G++ PS Q+ G + A GS +N STPG
Sbjct: 2664 VL----TTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPS---STPG 2714
Score = 37.0 bits (84), Expect = 0.034
Identities = 56/238 (23%), Positives = 82/238 (34%), Gaps = 51/238 (21%)
Query: 225 STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFD-----RSFPTLPTLTE-SRFP 278
+T S + + T H S+ TP +S+ PFS P RS T PT T + P
Sbjct: 3742 ATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIP 3801
Query: 279 DPRMHY-----------PGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 327
+ MS A P S+TP S++ T P P
Sbjct: 3802 SSSLGTTWTRLSQTTTPTATMSTATP-SSTPETAHTSTVLTTTATTTRATGSVATPSSTP 3860
Query: 328 GAPQN---------------QSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 372
G S P A P + T+ + ++ S G +PT
Sbjct: 3861 GTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTHTPT 3920
Query: 373 RMLASCTSSAASVAAGNLMNPSLGGQSDG-----------VEADGSHSNSPTALSTPG 419
+ T++ +VA G++ PS Q+ G + A GS +N STPG
Sbjct: 3921 VL----TTTTTTVATGSMATPSSSTQTSGTPPSLITTATTITATGSTTNPS---STPG 3971
Score = 35.4 bits (80), Expect = 0.10
Identities = 45/194 (23%), Positives = 70/194 (36%), Gaps = 21/194 (10%)
Query: 223 TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 282
T TP P +L TT Q TP+ S ++P S P S T +R
Sbjct: 3067 TSFTPIPSFTLGTTGTLPEQTTTPMATMSTIHPSSTPETTHTSTVLTTKATTTR------ 3120
Query: 283 HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 342
A S+ S+TP T I + T+ T P PG + P
Sbjct: 3121 ----ATSSMSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTTWILTEPST---- 3172
Query: 343 PYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGV 402
T++ + A +SS + T + + T++ +V + S G + +
Sbjct: 3173 -------TATVTVPTGSTATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATAL 3225
Query: 403 EADGSHSNSPTALS 416
A S + +PTA S
Sbjct: 3226 PALRSTATTPTATS 3239
Score = 34.3 bits (77), Expect = 0.22
Identities = 61/242 (25%), Positives = 86/242 (35%), Gaps = 54/242 (22%)
Query: 225 STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFD-----RSFPTLPTLTE-SRFP 278
+T S + + T H S+ TP +S+ P S P RS T PT T + P
Sbjct: 4470 ATASSTQATAGTPHVSTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIP 4529
Query: 279 DPRMHY-----------PGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 327
+ MS A P S+TP S++ A T P P
Sbjct: 4530 SSSLGTTWTRLSQTTTPTATMSTATP-SSTPETVHTSTVLTATATTTGATGSVATPSSTP 4588
Query: 328 G------APQNQSGPFQANPS---------PYHLYY----GTSSGSYQFSMVAGSSSGGD 368
G P + F A PS P + T++ + S V SS G
Sbjct: 4589 GTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGT 4648
Query: 369 RSPTRMLASCTSSAASVAAGNLMNPSLGGQSDG-----------VEADGSHSNSPTALST 417
R+L T++ +VA G++ PS Q+ G + A GS +N ST
Sbjct: 4649 THTARVL---TTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPS---ST 4702
Query: 418 PG 419
PG
Sbjct: 4703 PG 4704
Score = 33.9 bits (76), Expect = 0.29
Identities = 29/106 (27%), Positives = 38/106 (35%), Gaps = 10/106 (9%)
Query: 223 TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 282
T TP P +L TT Q TP+ S ++P S P S T +R
Sbjct: 4324 TSVTPIPSSTLGTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTKATTTR------ 4377
Query: 283 HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPG 328
A S+ S+TP T I + T+ T P PG
Sbjct: 4378 ----ATSSTSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPG 4419
Score = 33.1 bits (74), Expect = 0.50
Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 17/187 (9%)
Query: 223 TPSTPSPRGSLST--TSHFSSQPQTPIQGTSELNPFSDPRQFDRSFP---------TLPT 271
TP+T S ST T+ ++P T T+ + P R+ P T PT
Sbjct: 1891 TPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTATTPT 1950
Query: 272 LTESRF-PDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPAT-SRFHHTYLPPPYPGA 329
+T S+ P A+ A + TP+ TS++ + + + T +R T P
Sbjct: 1951 VTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTATMST 2010
Query: 330 PQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCT---SSAASVA 386
S P A+ S T++G+ S+ SS+ G T++ + T ++ S +
Sbjct: 2011 ATPSSTPETAHTSTVLTATATTTGA-TGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSS 2069
Query: 387 AGNLMNP 393
G + P
Sbjct: 2070 PGTALTP 2076
>gi|110431352 transducer of regulated CREB protein 3 isoform b [Homo
sapiens]
Length = 618
Score = 38.5 bits (88), Expect = 0.012
Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 23/137 (16%)
Query: 225 STPSPRGSLSTT---SHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPT---------- 271
S PS + +L+ T S ++ PQT + S L+P R F S P+L T
Sbjct: 329 SNPSIQATLNKTVLSSSLNNHPQTSVPNASALHP--SLRLFSLSNPSLSTTNLSGPSRRR 386
Query: 272 ------LTESRFPDPRMHYPGAMSAAFPYSATPSGTSISS-LSVAGMPATSRFHHTYLPP 324
LT S P+ + +S+ P + P+ +SS S T PP
Sbjct: 387 QPPVSPLTLSPGPEAHQGFSRQLSSTSPLAPYPTSQMVSSDRSQLSFLPTEAQAQVSPPP 446
Query: 325 PYPGAPQNQSGPFQANP 341
PYP APQ + P P
Sbjct: 447 PYP-APQELTQPLLQQP 462
>gi|110431354 transducer of regulated CREB protein 3 isoform a [Homo
sapiens]
Length = 619
Score = 38.5 bits (88), Expect = 0.012
Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 23/137 (16%)
Query: 225 STPSPRGSLSTT---SHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPT---------- 271
S PS + +L+ T S ++ PQT + S L+P R F S P+L T
Sbjct: 329 SNPSIQATLNKTVLSSSLNNHPQTSVPNASALHP--SLRLFSLSNPSLSTTNLSGPSRRR 386
Query: 272 ------LTESRFPDPRMHYPGAMSAAFPYSATPSGTSISS-LSVAGMPATSRFHHTYLPP 324
LT S P+ + +S+ P + P+ +SS S T PP
Sbjct: 387 QPPVSPLTLSPGPEAHQGFSRQLSSTSPLAPYPTSQMVSSDRSQLSFLPTEAQAQVSPPP 446
Query: 325 PYPGAPQNQSGPFQANP 341
PYP APQ + P P
Sbjct: 447 PYP-APQELTQPLLQQP 462
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 38.5 bits (88), Expect = 0.012
Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 30/169 (17%)
Query: 190 GPREPRRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQG 249
G R P R ++ + + + G TP+ P + S +QP P +
Sbjct: 566 GSRRPPRSPERTLSPSSGYSSQSG---------TPTLPPKGLAGPPASPGKAQPPKPERV 616
Query: 250 TSELNP--------------FSDPRQFDRSFPTLPTLTESRF---PDPRMHYPGAMSAAF 292
TS +P SDP DRS P + T RF P P++ P + +
Sbjct: 617 TSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPPSK 676
Query: 293 PYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANP 341
P S P+ ++++ +V P ++ T P P PQ P Q +P
Sbjct: 677 PRSPNPAAPALAAPAVVPGPVST----TDASPQSPPTPQTTLTPLQESP 721
Score = 29.3 bits (64), Expect = 7.2
Identities = 39/182 (21%), Positives = 61/182 (33%), Gaps = 27/182 (14%)
Query: 231 GSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSA 290
G +STT + PQ+P + L P + + P+ P P H P
Sbjct: 695 GPVSTTD---ASPQSPPTPQTTLTPLQESPVISKDQSPPPS------PPPSYHPPPP--- 742
Query: 291 AFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGT 350
T + A A PPP P AP+ Q P P +
Sbjct: 743 -----PTKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPPPEEAF--- 794
Query: 351 SSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSN 410
FS+ + +G SP +++S +S++S A + P A S+
Sbjct: 795 ------FSVASPEPAGPSGSP-ELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASS 847
Query: 411 SP 412
+P
Sbjct: 848 AP 849
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 38.1 bits (87), Expect = 0.015
Identities = 62/274 (22%), Positives = 99/274 (36%), Gaps = 71/274 (25%)
Query: 173 NPTQVATYHRAIKVTVDGPREPRR--HRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPR 230
+P+ + T H + + T G E H QT FP+ T S R
Sbjct: 728 SPSSIPTTHISARSTTSGLVEESTTYHSSPGSTQTMHFPES-------------DTTSGR 774
Query: 231 GSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSA 290
G STTSH S+ + + P+ T + +P ++ S
Sbjct: 775 GEESTTSHSST---------------------THTISSAPSTTSALVEEPTSYHSSPGST 813
Query: 291 A---FPYSATPSGTSISSL-SVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHL 346
A FP S+T SG S S+ S + AT P N ++ SP
Sbjct: 814 ATTHFPDSSTTSGRSEESIASHSSQDATGTI-------VLPARSTNSVLLGESTTSP--- 863
Query: 347 YYGTSSGSYQFSMVAGSSS------------GGDRSPTRMLASCTSSAASVAAGNLMNPS 394
SSGS + + + GS++ RSP L+ +++++ V+ + + S
Sbjct: 864 ---ISSGSMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHS 920
Query: 395 LGGQS------DGVEADGSHSNSPTALSTPGRMD 422
G + D G +S T+ S+PG D
Sbjct: 921 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTD 954
Score = 34.7 bits (78), Expect = 0.17
Identities = 43/157 (27%), Positives = 58/157 (36%), Gaps = 14/157 (8%)
Query: 220 MRVTPSTPSPRGSLSTTSHF--SSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRF 277
M P+T S LSTTSH SS P T +S S+ S P P T S
Sbjct: 1149 MPAPPTTTSAFVELSTTSHGSPSSIPTTHFSASSTTFGRSEESTTVHSSPVAPATTPS-- 1206
Query: 278 PDPRMHYPGAMSAAFPYSATPSGTSI----SSLSVAGMPATSRFHHTYLPPPYPGAPQNQ 333
R G + + Y ++P T S + +G SR H+ P
Sbjct: 1207 -PARSTTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTT 1265
Query: 334 SGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRS 370
S + P+ YH +S GS + SS+ RS
Sbjct: 1266 SALVE-EPTSYH----SSPGSIATTHFPESSTTSGRS 1297
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 37.7 bits (86), Expect = 0.020
Identities = 59/234 (25%), Positives = 79/234 (33%), Gaps = 26/234 (11%)
Query: 191 PREPRRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGT 250
P EP H P F +L + S P+P Q Q P +G
Sbjct: 814 PSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPP-EGP 872
Query: 251 SELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATP--SGTSISSLSV 308
P P + + + T SR P P P FP S P S T +L +
Sbjct: 873 LPPAPHLPPSSTSSAVAS-SSETSSRLPAPT---PSDFQLQFPPSQGPHKSPTPPPTLHL 928
Query: 309 AGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHL---YYGTSSGSYQFSMVAGSSS 365
PA PPP P Q + PF A P P L ++ SG + G+ +
Sbjct: 929 VPEPAAP-------PPPPPRTFQMVTTPFPALPQPKALLERFHQVPSGIILQNKAGGAPA 981
Query: 366 GGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPG 419
S + L TS AASV G G SH+ +P ++ G
Sbjct: 982 APQTSTS--LGPLTSPAASVLVS-------GQAPSGTPTAPSHAPAPAPMAATG 1026
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 37.7 bits (86), Expect = 0.020
Identities = 40/132 (30%), Positives = 51/132 (38%), Gaps = 23/132 (17%)
Query: 224 PSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTL----------- 272
P +PSP + T+H + P P S+ + +S P PT P
Sbjct: 206 PYSPSPSLPVGPTAH-GALPPAPFPVVSQPSFYSGPLG-----PTYPAAQLGPRGAAGYS 259
Query: 273 -TESRFPDPRMHYPGA-MSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAP 330
+ R PR YPG M A+ P G + S G P S + T PPYP P
Sbjct: 260 WSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSP----GYPQQSPYPATGGKPPYPIQP 315
Query: 331 QNQSGPFQANPS 342
Q S P Q PS
Sbjct: 316 QLPSFPGQPQPS 327
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 37.4 bits (85), Expect = 0.026
Identities = 49/179 (27%), Positives = 63/179 (35%), Gaps = 28/179 (15%)
Query: 223 TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 282
T TP P SL TT SQ TP S P S P S T T +
Sbjct: 2671 TSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTT------- 2723
Query: 283 HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 342
GA + ATPS T + +P T+ T P PG +
Sbjct: 2724 ---GATGSV----ATPSSTP-GTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTT 2775
Query: 343 PYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDG 401
P T+ G S V SS G +L T++ +VA G++ PS Q+ G
Sbjct: 2776 P------TTRG----STVTPSSIPGTTHTATVL---TTTTTTVATGSMATPSSSTQTSG 2821
Score = 35.8 bits (81), Expect = 0.077
Identities = 53/228 (23%), Positives = 78/228 (34%), Gaps = 39/228 (17%)
Query: 225 STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFD-----RSFPTLPTLTE-SRFP 278
+T S + + T H S+ TP +S+ PFS P RS T PT T + P
Sbjct: 3120 ATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIP 3179
Query: 279 DPRMHY-----------PGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 327
+ MS A P S+TP S++ T P P
Sbjct: 3180 SSSLGTTWTRLSQTTTPTATMSTATP-SSTPETVHTSTVLTTTATTTGATGSVATPSSTP 3238
Query: 328 GAPQN---------------QSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 372
G S P A P + T+ + ++ S G +PT
Sbjct: 3239 GTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPT 3298
Query: 373 RMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGR 420
+ T++ +VA G++ PS Q+ G N T +T GR
Sbjct: 3299 VL----TTTTTTVATGSMATPSSSTQTSGTTHTPPVPN--TTATTHGR 3340
Score = 35.8 bits (81), Expect = 0.077
Identities = 53/228 (23%), Positives = 78/228 (34%), Gaps = 39/228 (17%)
Query: 225 STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFD-----RSFPTLPTLTE-SRFP 278
+T S + + T H S+ TP +S+ PFS P RS T PT T + P
Sbjct: 4267 ATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIP 4326
Query: 279 DPRMHY-----------PGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 327
+ MS A P S+TP S++ T P P
Sbjct: 4327 SSSLGTTWTRLSQTTTPTATMSTATP-SSTPETAHTSTVLTTTATTTRATGSVATPSSTP 4385
Query: 328 GAPQN---------------QSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 372
G S P A P + T+ + ++ S G +PT
Sbjct: 4386 GTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTHTPT 4445
Query: 373 RMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGR 420
+ T++ +VA G++ PS Q+ G N T +T GR
Sbjct: 4446 VL----TTTTTTVATGSMATPSSSTQTSGTTHTPPVPN--TTATTHGR 4487
Score = 35.4 bits (80), Expect = 0.10
Identities = 45/194 (23%), Positives = 70/194 (36%), Gaps = 21/194 (10%)
Query: 223 TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 282
T TP P +L TT Q TP+ S ++P S P S T +R
Sbjct: 3647 TSFTPIPSFTLGTTGTLPEQTTTPMATMSTIHPSSTPETTHTSTVLTTKATTTR------ 3700
Query: 283 HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 342
A S+ S+TP T I + T+ T P PG + P
Sbjct: 3701 ----ATSSMSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTTWILTEPST---- 3752
Query: 343 PYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGV 402
T++ + A +SS + T + + T++ +V + S G + +
Sbjct: 3753 -------TATVTVPTGSTATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATAL 3805
Query: 403 EADGSHSNSPTALS 416
A S + +PTA S
Sbjct: 3806 PALRSTATTPTATS 3819
Score = 33.9 bits (76), Expect = 0.29
Identities = 29/106 (27%), Positives = 38/106 (35%), Gaps = 10/106 (9%)
Query: 223 TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 282
T TP P +L TT Q TP+ S ++P S P S T +R
Sbjct: 4794 TSVTPIPSSTLGTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTKATTTR------ 4847
Query: 283 HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPG 328
A S+ S+TP T I + T+ T P PG
Sbjct: 4848 ----ATSSTSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPG 4889
Score = 33.1 bits (74), Expect = 0.50
Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 17/187 (9%)
Query: 223 TPSTPSPRGSLST--TSHFSSQPQTPIQGTSELNPFSDPRQFDRSFP---------TLPT 271
TP+T S ST T+ ++P T T+ + P R+ P T PT
Sbjct: 2581 TPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTATTPT 2640
Query: 272 LTESRF-PDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPAT-SRFHHTYLPPPYPGA 329
+T S+ P A+ A + TP+ TS++ + + + T +R T P
Sbjct: 2641 VTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTATMST 2700
Query: 330 PQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCT---SSAASVA 386
S P A+ S T++G+ S+ SS+ G T++ + T ++ S +
Sbjct: 2701 ATPSSTPETAHTSTVLTATATTTGA-TGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSS 2759
Query: 387 AGNLMNP 393
G + P
Sbjct: 2760 PGTALTP 2766
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 37.4 bits (85), Expect = 0.026
Identities = 55/220 (25%), Positives = 83/220 (37%), Gaps = 27/220 (12%)
Query: 220 MRVTPSTPSPRGSLSTTSHF--SSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRF 277
M P+T S LSTTSH SS P T +S S+ S P T S
Sbjct: 1842 MPAPPTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPS-- 1899
Query: 278 PDPRMHYPGAMSAAFPYSATPSGTSI----SSLSVAGMPATSRFHHTYLPPPYPGAPQNQ 333
R G + + Y ++P T S + +G SR H+ P
Sbjct: 1900 -PARSTTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTT 1958
Query: 334 SGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNP 393
S + P+ YH +S GS + SS+ RS S S ++ A G ++ P
Sbjct: 1959 SALVE-EPTSYH----SSPGSTATTHFPDSSTTSGRSE----ESTASHSSQDATGTIVLP 2009
Query: 394 S-------LGGQSDGVEADGSHSNS--PTALSTPGRMDEA 424
+ LG + + GS + P + +TPG +++
Sbjct: 2010 ARSTTSVLLGESTTSPISSGSMETTALPGSTTTPGLSEKS 2049
Score = 35.8 bits (81), Expect = 0.077
Identities = 59/281 (20%), Positives = 102/281 (36%), Gaps = 57/281 (20%)
Query: 164 FTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKPFPDRFGDLERLRMRVT 223
F+ + T + T H + T P R L +++ + G + + +
Sbjct: 3428 FSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTTYHSSPGSTQTMHFPES 3487
Query: 224 PSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMH 283
+T S RG STTSH S+ + + P+ T + +P +
Sbjct: 3488 DTT-SGRGEESTTSHSST---------------------THTISSAPSTTSALVEEPTSY 3525
Query: 284 YPGAMSAA---FPYSATPSGTS-ISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQA 339
+ S A FP S+T SG S S+ S + AT + P G
Sbjct: 3526 HSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGT-----IVLPARSTTSVLLGESTT 3580
Query: 340 NPSPYHLYYGTSSGSYQFSMVAGSSS------------GGDRSPTRMLASCTSSAASVAA 387
+P SSGS + + + GS++ RSP L+ +++++ V+
Sbjct: 3581 SP--------ISSGSMETTALPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVSE 3632
Query: 388 GNLMNPSLGGQS------DGVEADGSHSNSPTALSTPGRMD 422
+ + S G + D G +S T+ S+PG D
Sbjct: 3633 ESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTD 3673
Score = 35.0 bits (79), Expect = 0.13
Identities = 61/274 (22%), Positives = 98/274 (35%), Gaps = 71/274 (25%)
Query: 173 NPTQVATYHRAIKVTVDGPREPRR--HRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPR 230
+P+ + T H + + T G E H QT FP+ T S R
Sbjct: 807 SPSSIPTTHISARSTTSGLVEESTTYHSSPGSTQTMHFPES-------------DTTSGR 853
Query: 231 GSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSA 290
G STTSH S+ + + P+ T + +P ++ S
Sbjct: 854 GEESTTSHSST---------------------THTISSAPSTTSALVEEPTSYHSSPGST 892
Query: 291 A---FPYSATPSGTS-ISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHL 346
A FP S+T SG S S+ S + AT + P G +P
Sbjct: 893 ATTHFPDSSTTSGRSEESTASHSSQDATGT-----IVLPARSTTSVLLGESTTSP----- 942
Query: 347 YYGTSSGSYQFSMVAGSSS------------GGDRSPTRMLASCTSSAASVAAGNLMNPS 394
SSGS + + + GS++ RSP L+ +++++ V+ + + S
Sbjct: 943 ---ISSGSMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRS 999
Query: 395 LGGQS------DGVEADGSHSNSPTALSTPGRMD 422
G + D G +S T+ S+PG D
Sbjct: 1000 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTD 1033
Score = 32.7 bits (73), Expect = 0.65
Identities = 49/200 (24%), Positives = 78/200 (39%), Gaps = 27/200 (13%)
Query: 223 TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 282
TPS SP + +TT P TP ++ PR D + T + +
Sbjct: 2496 TPSRLSPSSTETTT--LPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESST 2553
Query: 283 HY--PGAM-SAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP-GAPQNQSGPFQ 338
+ PG+ + AFP S T G S S + P ++ T LP P +S
Sbjct: 2554 SHSQPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGST--DTTLLPASTTTSGPSQESTTSH 2611
Query: 339 ANP----------SPYHLYYG-------TSSGSYQFSMVAGS--SSGGDRSPTRMLASCT 379
++P S L +G +S GS ++ S SSG + TR+ +S
Sbjct: 2612 SSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTG 2671
Query: 380 SSAASVAAGNLMNPSLGGQS 399
S +++ + +P L G+S
Sbjct: 2672 SPRTTLSPASSTSPGLQGES 2691
Score = 32.3 bits (72), Expect = 0.85
Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 8/175 (4%)
Query: 231 GSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSA 290
G ++ F P + G +D + +FP+ T ++ R G +
Sbjct: 1352 GLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGLVGE 1411
Query: 291 AFPYSATPSGTSISSLSVAGMPATSRFHHT----YLPPPYPGAPQNQSGPFQANPSPYHL 346
+ P +PS T ++L G P T Y P P A + + + S
Sbjct: 1412 STPSRLSPSSTETTTL--PGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESS 1469
Query: 347 YYGTSSGSYQFSMVAGSSSGGDRS--PTRMLASCTSSAASVAAGNLMNPSLGGQS 399
+ GS + S++ D S PT +S S+ A+++ G+ SLG QS
Sbjct: 1470 TSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQS 1524
Score = 32.3 bits (72), Expect = 0.85
Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 8/175 (4%)
Query: 231 GSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSA 290
G ++ F P + G +D + +FP+ T ++ R G +
Sbjct: 3992 GLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGLVGE 4051
Query: 291 AFPYSATPSGTSISSLSVAGMPATSRFHHT----YLPPPYPGAPQNQSGPFQANPSPYHL 346
+ P +PS T ++L G P T Y P P A + + + S
Sbjct: 4052 STPSRLSPSSTETTTLP--GSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESS 4109
Query: 347 YYGTSSGSYQFSMVAGSS--SGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQS 399
+ GS + S+ SG + PT +S S+ A+++ G+ SLG QS
Sbjct: 4110 TSHSQPGSTHTTAFPDSTTTSGLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQS 4164
Score = 32.0 bits (71), Expect = 1.1
Identities = 51/247 (20%), Positives = 85/247 (34%), Gaps = 23/247 (9%)
Query: 159 GRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKPFPDRFGDLERL 218
G + T + T+ + R+ +V G H + T F +
Sbjct: 2852 GLSEESTTVYSSSPGSTETTVFPRSTTTSVRGEEPTTFHSRPASTHTTLFTE-------- 2903
Query: 219 RMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFP 278
ST S G ++ F P + G +D + +FP+ T +
Sbjct: 2904 -----DSTTS--GLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTTLS 2956
Query: 279 DPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHT----YLPPPYPGAPQNQS 334
R G + + P +PS T ++L G P T Y P P A + +
Sbjct: 2957 PARSTTSGLVGESTPSRLSPSSTETTTLP--GSPTTPSLSEKSTTFYTSPRSPDATLSPA 3014
Query: 335 GPFQANPSPYHLYYGTSSGSYQFSMVAGSS--SGGDRSPTRMLASCTSSAASVAAGNLMN 392
+ S + GS + S+ SG + PT +S S+ A+++ G+
Sbjct: 3015 TTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSGLSQEPTASHSSQGSTEATLSPGSTTA 3074
Query: 393 PSLGGQS 399
SLG QS
Sbjct: 3075 SSLGQQS 3081
Score = 29.6 bits (65), Expect = 5.5
Identities = 57/232 (24%), Positives = 82/232 (35%), Gaps = 31/232 (13%)
Query: 202 EDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFS--------SQPQTPIQGTSEL 253
E T P G +E + + +TP STT H S S T G SE
Sbjct: 2020 ESTTSPISS--GSMETTALPGSTTTPG-LSEKSTTFHSSPRSPATTLSPASTTSSGVSEE 2076
Query: 254 NPFSDPRQFDRSFPTLPTLTE----SRFPDPRMHYPGAMSAAF-PYSATPSGTSISSLSV 308
+ S R P T SR PG+ P S T SG S S +
Sbjct: 2077 STTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTS 2136
Query: 309 AGMPATSRFHHTYLPPPYPGAPQ--NQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSG 366
P ++ T L P A +S F ++P H S + SSG
Sbjct: 2137 HSSPGST---DTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTT---------SSG 2184
Query: 367 GDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEA-DGSHSNSPTALST 417
+ TR+ +S S +++ + +P L G+S + S +P+ ST
Sbjct: 2185 IVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPPST 2236
Score = 29.6 bits (65), Expect = 5.5
Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 25/145 (17%)
Query: 164 FTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKPFPDRFGDLERLRMRVT 223
F+ + T + T H + T P R L +++ + G + + +
Sbjct: 4511 FSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTTYHSSPGSTQTMHFPES 4570
Query: 224 PSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMH 283
+T S RG STTSH S+ + + P+ T + +P +
Sbjct: 4571 -NTTSGRGEESTTSHSST---------------------THTISSAPSTTSALVEEPTSY 4608
Query: 284 YPGAMSAA---FPYSATPSGTSISS 305
+ S A FP S+T SG S S
Sbjct: 4609 HSSPGSTATTHFPDSSTTSGRSEES 4633
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 37.0 bits (84), Expect = 0.034
Identities = 45/162 (27%), Positives = 61/162 (37%), Gaps = 27/162 (16%)
Query: 249 GTSELNPFSDPRQ--FDRSFPTLPTLT----ESRFPDPRMHY---------PGAMSAAFP 293
G L P++ P+Q D FP + S +P P Y PG+ +AA
Sbjct: 188 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAA 247
Query: 294 YSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP---GAPQNQSGP----FQANPSPYHL 346
S P +S S+ S + A RF P G PQ + P +PS
Sbjct: 248 GSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARG 307
Query: 347 YYGTSSGSYQFSMVAGSSSGG-DRSPTRMLASCTSSAASVAA 387
Y G G Y G GG + P M + C +AA+ AA
Sbjct: 308 YQGYPGGDYS----GGPQDGGAGKGPADMASQCWGAAAAAAA 345
Score = 29.6 bits (65), Expect = 5.5
Identities = 52/230 (22%), Positives = 73/230 (31%), Gaps = 33/230 (14%)
Query: 200 KLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDP 259
K+E P PD F + + + PSP GS S PQTP +S + D
Sbjct: 1106 KIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQG-----PQTPQSTSSSMAEGGDL 1160
Query: 260 RQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHH 319
+ P P T P + P + + I G +T + +
Sbjct: 1161 K------PPTPAST-----------PHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRN 1203
Query: 320 TYLPPPYPGAPQNQSG-----PFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRM 374
+ P P N S ++ N PY + GS F +GG P
Sbjct: 1204 SMTPNPGYQPSMNTSDMMGRMSYEPNKDPYG-SMRKAPGSDPFMSSGQGPNGGMGDPYSR 1262
Query: 375 LASCTSSAASVAAGNLMNPSLGGQSDGVEAD---GSHSNSPTALSTPGRM 421
A +VA G + GG D V + G N T P M
Sbjct: 1263 AAG--PGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLM 1310
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 37.0 bits (84), Expect = 0.034
Identities = 45/162 (27%), Positives = 61/162 (37%), Gaps = 27/162 (16%)
Query: 249 GTSELNPFSDPRQ--FDRSFPTLPTLT----ESRFPDPRMHY---------PGAMSAAFP 293
G L P++ P+Q D FP + S +P P Y PG+ +AA
Sbjct: 188 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAA 247
Query: 294 YSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP---GAPQNQSGP----FQANPSPYHL 346
S P +S S+ S + A RF P G PQ + P +PS
Sbjct: 248 GSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARG 307
Query: 347 YYGTSSGSYQFSMVAGSSSGG-DRSPTRMLASCTSSAASVAA 387
Y G G Y G GG + P M + C +AA+ AA
Sbjct: 308 YQGYPGGDYS----GGPQDGGAGKGPADMASQCWGAAAAAAA 345
Score = 29.6 bits (65), Expect = 5.5
Identities = 52/230 (22%), Positives = 73/230 (31%), Gaps = 33/230 (14%)
Query: 200 KLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDP 259
K+E P PD F + + + PSP GS S PQTP +S + D
Sbjct: 1106 KIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQG-----PQTPQSTSSSMAEGGDL 1160
Query: 260 RQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHH 319
+ P P T P + P + + I G +T + +
Sbjct: 1161 K------PPTPAST-----------PHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRN 1203
Query: 320 TYLPPPYPGAPQNQSG-----PFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRM 374
+ P P N S ++ N PY + GS F +GG P
Sbjct: 1204 SMTPNPGYQPSMNTSDMMGRMSYEPNKDPYG-SMRKAPGSDPFMSSGQGPNGGMGDPYSR 1262
Query: 375 LASCTSSAASVAAGNLMNPSLGGQSDGVEAD---GSHSNSPTALSTPGRM 421
A +VA G + GG D V + G N T P M
Sbjct: 1263 AAG--PGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLM 1310
>gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo
sapiens]
Length = 920
Score = 37.0 bits (84), Expect = 0.034
Identities = 45/158 (28%), Positives = 62/158 (39%), Gaps = 21/158 (13%)
Query: 246 PIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISS 305
P QG+S L P + P F + P+ PTL E P + Y S PS S
Sbjct: 745 PGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPPISY---------QSDIPSSLLTSE 795
Query: 306 LSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSS 365
S A +P+ P PG P + A P P L++ + + S+ G +S
Sbjct: 796 KSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGP-QLHHSNPPPASRQSL--GQAS 852
Query: 366 GGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVE 403
G PT L A S A G + PS+ G + E
Sbjct: 853 LG---PTGEL------AFSPATGVMGPPSMSGAGEAPE 881
>gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo
sapiens]
Length = 894
Score = 37.0 bits (84), Expect = 0.034
Identities = 45/158 (28%), Positives = 62/158 (39%), Gaps = 21/158 (13%)
Query: 246 PIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISS 305
P QG+S L P + P F + P+ PTL E P + Y S PS S
Sbjct: 719 PGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPPISY---------QSDIPSSLLTSE 769
Query: 306 LSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSS 365
S A +P+ P PG P + A P P L++ + + S+ G +S
Sbjct: 770 KSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGP-QLHHSNPPPASRQSL--GQAS 826
Query: 366 GGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVE 403
G PT L A S A G + PS+ G + E
Sbjct: 827 LG---PTGEL------AFSPATGVMGPPSMSGAGEAPE 855
>gi|5031887 LIM domain containing preferred translocation partner in
lipoma [Homo sapiens]
Length = 612
Score = 36.6 bits (83), Expect = 0.045
Identities = 41/166 (24%), Positives = 59/166 (35%), Gaps = 29/166 (17%)
Query: 222 VTPSTPSPRGSLSTTSHFSSQPQT---PIQGTSELNPFSDPRQFDRSFPTLPTLTESRF- 277
V P+ P + +T PQ P+ L P P+ S+ T T + F
Sbjct: 165 VIPNQPPLTATKKSTLKPQPAPQAGPIPVAPIGTLKP--QPQPVPASYTTASTSSRPTFN 222
Query: 278 -----PDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGM--PATSR--FHHTYLPPPYPG 328
P HY A S+ Y + P G + + V+G P ++R + Y+PPP
Sbjct: 223 VQVKSAQPSPHYMAAPSSGQIYGSGPQGYNTQPVPVSGQCPPPSTRGGMDYAYIPPP--- 279
Query: 329 APQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGG--DRSPT 372
P P + Y Y+ AG GG D PT
Sbjct: 280 ---------GLQPEPGYGYAPNQGRYYEGYYAAGPGYGGRNDSDPT 316
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 36.2 bits (82), Expect = 0.059
Identities = 52/203 (25%), Positives = 70/203 (34%), Gaps = 20/203 (9%)
Query: 224 PSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMH 283
P+TP S + ++P T G L P F P LP R +
Sbjct: 256 PTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASA 315
Query: 284 YPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSP 343
P + A PS ++ + G+P T P P+ P + S P P
Sbjct: 316 SPPGLGAQPLPGHLPSPHAMGQ-GMGGLPPGPEKGPTLAPSPHSLPPASSSAP----APP 370
Query: 344 YHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVE 403
Y +SS S S A SSS S +SS+AS + PS S
Sbjct: 371 MRFPYSSSSSS---SAAASSSS-----------SSSSSSASPFPASQALPSY-PHSFPPP 415
Query: 404 ADGSHSNSPTALSTPGRMDEAVW 426
S SN P + P +AVW
Sbjct: 416 TSLSVSNQPPKYTQPSLPSQAVW 438
Score = 36.2 bits (82), Expect = 0.059
Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 29/174 (16%)
Query: 206 KPFPDRFGDLERLRMRVTPSTPSPRGS-LSTTSHFSSQPQTPIQGTSELNPFSDPRQFDR 264
+P+P L +V+ S P G +S++S+ SS S +P P+
Sbjct: 540 RPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPY 599
Query: 265 SFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPP 324
FP +PT+T S SAT S T I+ +VA PA + PP
Sbjct: 600 PFPPVPTVTTS-------------------SATLS-TVIA--TVASSPAGYKTASPPGPP 637
Query: 325 PY------PGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 372
PY PGA + + P SP GT G S AG + SPT
Sbjct: 638 PYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPT 691
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 36.2 bits (82), Expect = 0.059
Identities = 52/203 (25%), Positives = 70/203 (34%), Gaps = 20/203 (9%)
Query: 224 PSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMH 283
P+TP S + ++P T G L P F P LP R +
Sbjct: 256 PTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASA 315
Query: 284 YPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSP 343
P + A PS ++ + G+P T P P+ P + S P P
Sbjct: 316 SPPGLGAQPLPGHLPSPHAMGQ-GMGGLPPGPEKGPTLAPSPHSLPPASSSAP----APP 370
Query: 344 YHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVE 403
Y +SS S S A SSS S +SS+AS + PS S
Sbjct: 371 MRFPYSSSSSS---SAAASSSS-----------SSSSSSASPFPASQALPSY-PHSFPPP 415
Query: 404 ADGSHSNSPTALSTPGRMDEAVW 426
S SN P + P +AVW
Sbjct: 416 TSLSVSNQPPKYTQPSLPSQAVW 438
Score = 36.2 bits (82), Expect = 0.059
Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 29/174 (16%)
Query: 206 KPFPDRFGDLERLRMRVTPSTPSPRGS-LSTTSHFSSQPQTPIQGTSELNPFSDPRQFDR 264
+P+P L +V+ S P G +S++S+ SS S +P P+
Sbjct: 540 RPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPY 599
Query: 265 SFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPP 324
FP +PT+T S SAT S T I+ +VA PA + PP
Sbjct: 600 PFPPVPTVTTS-------------------SATLS-TVIA--TVASSPAGYKTASPPGPP 637
Query: 325 PY------PGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 372
PY PGA + + P SP GT G S AG + SPT
Sbjct: 638 PYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPT 691
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,785,162
Number of Sequences: 37866
Number of extensions: 1083789
Number of successful extensions: 4785
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 239
Number of HSP's that attempted gapping in prelim test: 4399
Number of HSP's gapped (non-prelim): 634
length of query: 429
length of database: 18,247,518
effective HSP length: 105
effective length of query: 324
effective length of database: 14,271,588
effective search space: 4623994512
effective search space used: 4623994512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.