Guide to the Human Genome
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Name: AP2S1 Sequence: fasta or formatted (142aa) NCBI GI: 70906430
Description:

adaptor-related protein complex 2, sigma 1 subunit isoform AP17

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [104aa] adaptor-related protein complex 2, sigma 1 subunit isoform AP17delta
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6          8           1
 C cysteine            2.1          3           1
 D aspartate           5.6          8           3
 E glutamate           8.5         12           2
 F phenylalanine       7.7         11           1
 G glycine             2.1          3           1
 H histidine           2.8          4           1
 I isoleucine          6.3          9           2
 K lysine              6.3          9           1
 L leucine            10.6         15           2
 M methionine          2.8          4           1
 N asparagine          7.0         10           2
 P proline             0.0          0           0
 Q glutamine           4.2          6           1
 R arginine            5.6          8           2
 S serine              1.4          2           1
 T threonine           4.2          6           1
 V valine             10.6         15           2
 W tryptophan          0.7          1           1
 Y tyrosine            5.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 2, sigma 1 subunit i... 
AP2S1                 0.625   adaptor-related protein complex 2, sigma 1 subunit i...
AP1S1                 0.451   adaptor-related protein complex 1, sigma 1 subunit [H...
AP1S2                 0.443   adaptor-related protein complex 1 sigma 2 subunit [H...
AP1S3                 0.436   adaptor-related protein complex 1, sigma 3 subunit [...
AP4S1                 0.371   adaptor-related protein complex 4, sigma 1 subunit ...
AP3S1                 0.337   adaptor-related protein complex 3, sigma 1 subunit [H...
AP3S2                 0.322   adaptor-related protein complex 3, sigma 2 subunit [H...
AP4S1                 0.261   adaptor-related protein complex 4, sigma 1 subunit i...
AP1M2                 0.049   adaptor-related protein complex 1, mu 2 subunit [Homo...
AP2M1                 0.045   adaptor-related protein complex 2, mu 1 subunit isof...
AP2M1                 0.045   adaptor-related protein complex 2, mu 1 subunit isof...
ARCN1                 0.038   archain isoform 1 
TCP11L2               0.027   t-complex 11 (mouse) like 2 
AP1M1                 0.023   adaptor-related protein complex 1, mu 1 subunit iso...
AP1M1                 0.023   adaptor-related protein complex 1, mu 1 subunit isof...
AP3M1                 0.019   adaptor-related protein complex 3, mu 1 subunit [Homo...
AP3M1                 0.019   adaptor-related protein complex 3, mu 1 subunit [Hom...
AP3M2                 0.019   adaptor-related protein complex 3, mu 2 subunit [Ho...
AP3M2                 0.019   adaptor-related protein complex 3, mu 2 subunit [Homo...
DZIP1                 0.004   DAZ interacting protein 1 isoform 2 
DZIP1                 0.004   DAZ interacting protein 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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