Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AP3M1 Sequence: fasta or formatted (418aa) NCBI GI: 6912240
Description:

adaptor-related protein complex 3, mu 1 subunit

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt mRNA [418aa] adaptor-related protein complex 3, mu 1 subunit
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         16           2
 C cysteine            1.4          6           1
 D aspartate           5.0         21           2
 E glutamate           5.7         24           2
 F phenylalanine       5.7         24           2
 G glycine             5.5         23           1
 H histidine           1.9          8           2
 I isoleucine          8.1         34           2
 K lysine              6.9         29           1
 L leucine             8.4         35           2
 M methionine          1.9          8           1
 N asparagine          5.0         21           2
 P proline             6.2         26           2
 Q glutamine           3.6         15           2
 R arginine            3.3         14           2
 S serine              8.4         35           2
 T threonine           5.3         22           1
 V valine              9.6         40           2
 W tryptophan          1.0          4           1
 Y tyrosine            3.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 3, mu 1 subunit [Homo... 
AP3M1                 1.000   adaptor-related protein complex 3, mu 1 subunit [Hom...
AP3M2                 0.879   adaptor-related protein complex 3, mu 2 subunit [Ho...
AP3M2                 0.879   adaptor-related protein complex 3, mu 2 subunit [Homo...
AP1M2                 0.220   adaptor-related protein complex 1, mu 2 subunit [Homo...
AP1M1                 0.198   adaptor-related protein complex 1, mu 1 subunit isof...
AP1M1                 0.187   adaptor-related protein complex 1, mu 1 subunit iso...
AP2M1                 0.168   adaptor-related protein complex 2, mu 1 subunit isof...
AP2M1                 0.167   adaptor-related protein complex 2, mu 1 subunit isof...
AP4M1                 0.106   adaptor-related protein complex 4, mu 1 subunit [Hom...
AP1S3                 0.016   adaptor-related protein complex 1, sigma 3 subunit [...
AP4S1                 0.015   adaptor-related protein complex 4, sigma 1 subunit ...
AP1S2                 0.013   adaptor-related protein complex 1 sigma 2 subunit [H...
AP1S1                 0.012   adaptor-related protein complex 1, sigma 1 subunit [H...
TSC22D1               0.007   TSC22 domain family, member 1 isoform 1 
TSC22D1               0.007   TSC22 domain family, member 1 isoform 2 
STON1                 0.006   stonin 1 
STON1-GTF2A1L         0.006   STON1-GTF2A1L protein 
ARHGDIA               0.006   Rho GDP dissociation inhibitor (GDI) alpha 
AP2S1                 0.006   adaptor-related protein complex 2, sigma 1 subunit i...
RPA2                  0.005   replication protein A2, 32kDa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press