Guide to the Human Genome
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Name: AP3S2 Sequence: fasta or formatted (193aa) NCBI GI: 5031581
Description:

adaptor-related protein complex 3, sigma 2 subunit

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7          9           2
 C cysteine            2.1          4           1
 D aspartate           4.7          9           2
 E glutamate           8.3         16           2
 F phenylalanine       5.7         11           1
 G glycine             5.7         11           2
 H histidine           2.6          5           1
 I isoleucine          9.3         18           1
 K lysine              4.1          8           1
 L leucine            10.9         21           1
 M methionine          2.6          5           1
 N asparagine          7.3         14           2
 P proline             3.1          6           1
 Q glutamine           5.2         10           3
 R arginine            4.7          9           1
 S serine              4.7          9           2
 T threonine           2.1          4           1
 V valine              9.3         18           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 3, sigma 2 subunit [H... 
AP3S1                 0.856   adaptor-related protein complex 3, sigma 1 subunit [H...
AP1S1                 0.239   adaptor-related protein complex 1, sigma 1 subunit [H...
AP2S1                 0.236   adaptor-related protein complex 2, sigma 1 subunit i...
AP1S3                 0.236   adaptor-related protein complex 1, sigma 3 subunit [...
AP1S2                 0.233   adaptor-related protein complex 1 sigma 2 subunit [H...
AP4S1                 0.219   adaptor-related protein complex 4, sigma 1 subunit ...
AP4S1                 0.131   adaptor-related protein complex 4, sigma 1 subunit i...
AP2S1                 0.100   adaptor-related protein complex 2, sigma 1 subunit i...
COPZ2                 0.075   coatomer protein complex, subunit zeta 2 
COPZ1                 0.067   coatomer protein complex, subunit zeta 1 
KLHL36                0.017   kelch-like 36 
FSD2                  0.014   fibronectin type III and SPRY domain containing 2 [H...
CP                    0.008   ceruloplasmin precursor 
ZNF224                0.008   zinc finger protein 224 
CPZ                   0.006   carboxypeptidase Z isoform 3 
RAB42                 0.006   RAB42, member RAS oncogene family 
CPZ                   0.006   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.006   carboxypeptidase Z isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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