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Search of human proteins with 13787204
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13787204 DEAD box polypeptide 17 isoform 2 [Homo sapiens]
(183 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens] 383 e-107
gi|13787204 DEAD box polypeptide 17 isoform 2 [Homo sapiens] 383 e-107
gi|148613858 DEAD box polypeptide 17 isoform 4 [Homo sapiens] 374 e-104
gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens] 374 e-104
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 50 1e-06
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 50 1e-06
gi|61743946 abl-interactor 1 isoform c [Homo sapiens] 50 1e-06
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 46 2e-05
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 46 2e-05
gi|61743948 abl-interactor 1 isoform d [Homo sapiens] 45 3e-05
gi|61743944 abl-interactor 1 isoform b [Homo sapiens] 45 3e-05
gi|62122917 filaggrin family member 2 [Homo sapiens] 45 5e-05
gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens] 44 1e-04
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 44 1e-04
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 44 1e-04
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 44 1e-04
gi|57864582 hornerin [Homo sapiens] 43 1e-04
gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... 43 1e-04
gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... 43 1e-04
gi|195972866 keratin 10 [Homo sapiens] 42 2e-04
gi|119395750 keratin 1 [Homo sapiens] 41 5e-04
gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens] 41 7e-04
gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens] 40 9e-04
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 40 0.001
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 40 0.001
gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo s... 39 0.002
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s... 39 0.002
gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap... 39 0.002
gi|212549553 interleukin enhancer binding factor 3 isoform d [Ho... 39 0.002
gi|24234750 interleukin enhancer binding factor 3 isoform a [Hom... 39 0.002
>gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]
Length = 731
Score = 383 bits (983), Expect = e-107
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS
Sbjct: 549 MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 608
Query: 61 ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 120
ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT
Sbjct: 609 ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 668
Query: 121 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180
STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP
Sbjct: 669 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 728
Query: 181 SRK 183
SRK
Sbjct: 729 SRK 731
>gi|13787204 DEAD box polypeptide 17 isoform 2 [Homo sapiens]
Length = 183
Score = 383 bits (983), Expect = e-107
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS
Sbjct: 1 MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
Query: 61 ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 120
ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT
Sbjct: 61 ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 120
Query: 121 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180
STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP
Sbjct: 121 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180
Query: 181 SRK 183
SRK
Sbjct: 181 SRK 183
>gi|148613858 DEAD box polypeptide 17 isoform 4 [Homo sapiens]
Length = 181
Score = 374 bits (959), Expect = e-104
Identities = 181/183 (98%), Positives = 181/183 (98%), Gaps = 2/183 (1%)
Query: 1 MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
MQLVDHRGGGGGGG GRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS
Sbjct: 1 MQLVDHRGGGGGGG--GRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 58
Query: 61 ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 120
ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT
Sbjct: 59 ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 118
Query: 121 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180
STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP
Sbjct: 119 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 178
Query: 181 SRK 183
SRK
Sbjct: 179 SRK 181
>gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]
Length = 729
Score = 374 bits (959), Expect = e-104
Identities = 181/183 (98%), Positives = 181/183 (98%), Gaps = 2/183 (1%)
Query: 1 MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
MQLVDHRGGGGGGG GRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS
Sbjct: 549 MQLVDHRGGGGGGG--GRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 606
Query: 61 ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 120
ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT
Sbjct: 607 ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 666
Query: 121 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180
STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP
Sbjct: 667 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 726
Query: 181 SRK 183
SRK
Sbjct: 727 SRK 729
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 50.1 bits (118), Expect = 1e-06
Identities = 50/179 (27%), Positives = 68/179 (37%), Gaps = 41/179 (22%)
Query: 7 RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDG-GRRDSASYRDRSETDRA 65
RG GGG G G+ +S N +C +G + G G S ++ D
Sbjct: 499 RGSGGGQGSNGQGSSSHSSGGN--------QCSGEGQGSRGGQGSNGQGSGGNQCSRDGQ 550
Query: 66 GYANGSGYGS---PNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTST 122
G A G G G P G+ GQ G G + G +S + G+G G+
Sbjct: 551 GTAGGHGSGGGQRPGGGHGSGGGQ---GPGDGHGSGGGKNSGGGKGSGSGK-GSDGDGER 606
Query: 123 GRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPS 181
G+S + S F + +S QQ P PP PPPPPPPPP+
Sbjct: 607 GKSLKKRSY-FGKLTQSKQQQMP--------PP----------------PPPPPPPPPA 640
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 49.7 bits (117), Expect = 1e-06
Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 49 GRRDSASYRDRSETDRAGYANGSGYG-SPNSAFGAQAGQYTYGQ-GTYGAAAYGTSSYTA 106
G++ + Y ++T G ++ S YG S N+ +G Q+ YG G YG++ SSY
Sbjct: 34 GQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQ 93
Query: 107 QE----YGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQ-FAQPPGATNMI 161
Q YG +S++ S G SSQSSS G QQP QQ + Q
Sbjct: 94 QSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQ 153
Query: 162 GYMGQTAY 169
GY Q Y
Sbjct: 154 GYGQQNQY 161
Score = 33.9 bits (76), Expect = 0.080
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 6/112 (5%)
Query: 62 TDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTS 121
T +A + G+ P + Q+ Q YGQ +Y + T + + +YG S T
Sbjct: 7 TQQATQSYGAYPTQPGQGYSQQSSQ-PYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTG 65
Query: 122 TGRSSQSSSQQFSGIGRSGQQPQPLMSQQ-----FAQPPGATNMIGYMGQTA 168
G S +G S Q Q QQ + Q P ++ G G ++
Sbjct: 66 YGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSS 117
Score = 33.1 bits (74), Expect = 0.14
Identities = 29/114 (25%), Positives = 40/114 (35%), Gaps = 25/114 (21%)
Query: 7 RGGGGGGGKGGRSRYRTTS-------------------SANNPNLMYQDECDRRLRGVKD 47
RGG GGGG GG R S + N N +++EC++ D
Sbjct: 394 RGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPD 453
Query: 48 ------GGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYG 95
GG +Y D R GY G G G + G+ +G +G
Sbjct: 454 GPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFG 507
Score = 32.7 bits (73), Expect = 0.18
Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 11/126 (8%)
Query: 16 GGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGS 75
GG+ + + NP Y + GG +Y + +G +G GYG+
Sbjct: 137 GGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGN 196
Query: 76 PNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSG 135
+ + G +G YGQ G G G+G G RSS + G
Sbjct: 197 QDQSGGGGSG--GYGQQDRGGRGRG---------GSGGGGGGGGGGYNRSSGGYEPRGRG 245
Query: 136 IGRSGQ 141
GR G+
Sbjct: 246 GGRGGR 251
Score = 32.0 bits (71), Expect = 0.30
Identities = 33/128 (25%), Positives = 42/128 (32%), Gaps = 26/128 (20%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
GGGGGGG GG QD+ G GG D++G
Sbjct: 166 GGGGGGGGGGN--------------YGQDQSSMSSGGGSGGG---------YGNQDQSGG 202
Query: 68 ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQ 127
GYG + + G + G G G Y SS + G G G G S +
Sbjct: 203 GGSGGYGQQDRGGRGRGG--SGGGGGGGGGGYNRSSGGYEPRGRGG-GRGGRGGMGGSDR 259
Query: 128 SSSQQFSG 135
+F G
Sbjct: 260 GGFNKFGG 267
Score = 31.2 bits (69), Expect = 0.52
Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 7 RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKD-------GGRRDSASYRDR 59
RGG GGGG GG Y +S P R G D GG RD S D
Sbjct: 218 RGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHD- 276
Query: 60 SETDRA 65
SE D +
Sbjct: 277 SEQDNS 282
Score = 29.6 bits (65), Expect = 1.5
Identities = 34/140 (24%), Positives = 47/140 (33%), Gaps = 17/140 (12%)
Query: 11 GGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANG 70
G G GG +++ S+ Y G + S SY S++ G
Sbjct: 74 GYGSTGGYGSSQSSQSSYGQQSSYPGY------GQQPAPSSTSGSYGSSSQSSSYGQPQS 127
Query: 71 SGYGSPNSAFGAQAGQYTYGQGTYGAAAYG-TSSYTAQEYGAGTYGASSTTSTGRSSQSS 129
Y S ++G Q Y Q YG + Y + G G G +SS SS
Sbjct: 128 GSY-SQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSS 186
Query: 130 ---------SQQFSGIGRSG 140
+Q SG G SG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSG 206
>gi|61743946 abl-interactor 1 isoform c [Homo sapiens]
Length = 452
Score = 49.7 bits (117), Expect = 1e-06
Identities = 47/171 (27%), Positives = 66/171 (38%), Gaps = 14/171 (8%)
Query: 11 GGGGKGGRSRYRTTSSANNPNLMYQDECD-RRLRGVKDGGRRDSASYRDRSETDRAGYAN 69
G G G + Y+T P + RL GR S + R R+ + +G +
Sbjct: 188 GRGTLGRNTPYKTLEPVKPPTVPNDYMTSPARLGSQHSPGRTASLNQRPRTHSGSSG-GS 246
Query: 70 GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSS 129
GS S +S+ G T T G AA G++ +YG T S ST S+ S
Sbjct: 247 GSRENSGSSSIGIPIAVPTPSPPTIGPAAPGSAP--GSQYGTMTRQISRHNSTTSSTSSG 304
Query: 130 SQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180
G + P ++ QF+ P Y + P PPPPPPP
Sbjct: 305 ----------GYRRTPSVTAQFSAQPHVNGGPLYSQNSIADSPTPPPPPPP 345
>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
isoform d [Homo sapiens]
Length = 756
Score = 46.2 bits (108), Expect = 2e-05
Identities = 55/201 (27%), Positives = 74/201 (36%), Gaps = 51/201 (25%)
Query: 5 DHRGGGGG---GGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSE 61
D+RGGGG GG GG RY +Q+ + GG +Y R
Sbjct: 510 DNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQN---------RGGGSGGGGNY--RGG 558
Query: 62 TDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAY---------------------G 100
+R+G G GY + + +G+Y A
Sbjct: 559 FNRSG---GGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPP 615
Query: 101 TSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNM 160
+ S GA TY +S G S+ +S+ S S PQP ++QPP N
Sbjct: 616 SYSPARNPPGASTYNKNSNI-PGSSANTSTPTVS----SYSPPQP----SYSQPP--YNQ 664
Query: 161 IGYMGQTAYQYPPPPPPPPPS 181
GY Y PPPPPPPPP+
Sbjct: 665 GGY--SQGYTAPPPPPPPPPA 683
Score = 37.0 bits (84), Expect = 0.009
Identities = 38/157 (24%), Positives = 57/157 (36%), Gaps = 24/157 (15%)
Query: 33 MYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAF-------GAQAG 85
+ ++E D+ +R + GR+ R + G G G G + G + G
Sbjct: 482 LQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGG 541
Query: 86 QYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQP 145
G G+ G Y + G G Y + + R + +S+ + S QQP P
Sbjct: 542 FQNRGGGSGGGGNYRGGFNRS---GGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPP 598
Query: 146 LMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSR 182
QPP Q Q PPPPP P+R
Sbjct: 599 ------QQPPPP--------QPPPQQPPPPPSYSPAR 621
>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
isoform a [Homo sapiens]
Length = 856
Score = 46.2 bits (108), Expect = 2e-05
Identities = 55/201 (27%), Positives = 74/201 (36%), Gaps = 51/201 (25%)
Query: 5 DHRGGGGG---GGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSE 61
D+RGGGG GG GG RY +Q+ + GG +Y R
Sbjct: 610 DNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQN---------RGGGSGGGGNY--RGG 658
Query: 62 TDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAY---------------------G 100
+R+G G GY + + +G+Y A
Sbjct: 659 FNRSG---GGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPP 715
Query: 101 TSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNM 160
+ S GA TY +S G S+ +S+ S S PQP ++QPP N
Sbjct: 716 SYSPARNPPGASTYNKNSNI-PGSSANTSTPTVS----SYSPPQP----SYSQPP--YNQ 764
Query: 161 IGYMGQTAYQYPPPPPPPPPS 181
GY Y PPPPPPPPP+
Sbjct: 765 GGY--SQGYTAPPPPPPPPPA 783
Score = 37.0 bits (84), Expect = 0.009
Identities = 38/157 (24%), Positives = 57/157 (36%), Gaps = 24/157 (15%)
Query: 33 MYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAF-------GAQAG 85
+ ++E D+ +R + GR+ R + G G G G + G + G
Sbjct: 582 LQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGG 641
Query: 86 QYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQP 145
G G+ G Y + G G Y + + R + +S+ + S QQP P
Sbjct: 642 FQNRGGGSGGGGNYRGGFNRS---GGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPP 698
Query: 146 LMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSR 182
QPP Q Q PPPPP P+R
Sbjct: 699 ------QQPPPP--------QPPPQQPPPPPSYSPAR 721
>gi|61743948 abl-interactor 1 isoform d [Homo sapiens]
Length = 476
Score = 45.4 bits (106), Expect = 3e-05
Identities = 54/191 (28%), Positives = 74/191 (38%), Gaps = 25/191 (13%)
Query: 11 GGGGKGGRSRYRTTSSANNPNLMYQDECD-RRLRGVKDGGRRDSASYRDRSETDRAGYAN 69
G G G + Y+T P + RL GR S + R R+ + +G +
Sbjct: 183 GRGTLGRNTPYKTLEPVKPPTVPNDYMTSPARLGSQHSPGRTASLNQRPRTHSGSSG-GS 241
Query: 70 GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGAS------STTSTG 123
GS S +S+ G T T G AA G++ +YG T S S+TS+G
Sbjct: 242 GSRENSGSSSIGIPIAVPTPSPPTIGPAAPGSAP--GSQYGTMTRQISRHNSTTSSTSSG 299
Query: 124 --RSSQSSSQQFSGIGR------------SGQQPQPLMSQQFAQPPGATNMIGYMGQTAY 169
R + S + QFS S P P M Q Q P T + + +
Sbjct: 300 GYRRTPSVTAQFSAQPHVNGGPLYSQNSISIAPPPPPMPQLTPQIP-LTGFVARVQENIA 358
Query: 170 QYPPPPPPPPP 180
P PPPPPPP
Sbjct: 359 DSPTPPPPPPP 369
>gi|61743944 abl-interactor 1 isoform b [Homo sapiens]
Length = 481
Score = 45.4 bits (106), Expect = 3e-05
Identities = 54/191 (28%), Positives = 74/191 (38%), Gaps = 25/191 (13%)
Query: 11 GGGGKGGRSRYRTTSSANNPNLMYQDECD-RRLRGVKDGGRRDSASYRDRSETDRAGYAN 69
G G G + Y+T P + RL GR S + R R+ + +G +
Sbjct: 188 GRGTLGRNTPYKTLEPVKPPTVPNDYMTSPARLGSQHSPGRTASLNQRPRTHSGSSG-GS 246
Query: 70 GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGAS------STTSTG 123
GS S +S+ G T T G AA G++ +YG T S S+TS+G
Sbjct: 247 GSRENSGSSSIGIPIAVPTPSPPTIGPAAPGSAP--GSQYGTMTRQISRHNSTTSSTSSG 304
Query: 124 --RSSQSSSQQFSGIGR------------SGQQPQPLMSQQFAQPPGATNMIGYMGQTAY 169
R + S + QFS S P P M Q Q P T + + +
Sbjct: 305 GYRRTPSVTAQFSAQPHVNGGPLYSQNSISIAPPPPPMPQLTPQIP-LTGFVARVQENIA 363
Query: 170 QYPPPPPPPPP 180
P PPPPPPP
Sbjct: 364 DSPTPPPPPPP 374
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 44.7 bits (104), Expect = 5e-05
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 8/138 (5%)
Query: 9 GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY- 67
G G G G ++ + S ++ ++ + G G S+ Y +G+
Sbjct: 736 GSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFG 795
Query: 68 ------ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTS 121
+ +G+G S G AG +G G+ ++ +G + + G +G+ S+ S
Sbjct: 796 QHGSGSSQSTGFGQYGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQS 855
Query: 122 TGRSSQ-SSSQQFSGIGR 138
+G SSS Q SG G+
Sbjct: 856 SGYGQHGSSSGQTSGFGQ 873
Score = 44.3 bits (103), Expect = 6e-05
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 13/139 (9%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
G G + G+S Y SS ++ + Y R+ G G S S T Y
Sbjct: 757 GFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQS------TGFGQY 810
Query: 68 ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTS-----SYTAQEYGAGTYGASSTTST 122
+GSG + G+ +GQ + G G + + ++ +S S ++Q G G +G+SS ++
Sbjct: 811 GSGSGQSAGFGQHGSGSGQ-SSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTS 869
Query: 123 G-RSSQSSSQQFSGIGRSG 140
G +SSS Q+SG G+ G
Sbjct: 870 GFGQHRSSSGQYSGFGQHG 888
Score = 43.1 bits (100), Expect = 1e-04
Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 23/155 (14%)
Query: 9 GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETD----- 63
G G G G ++ T S + ++ + G G S+ Y +
Sbjct: 888 GSGSGQSSGFGQHGTGSGQYSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFG 947
Query: 64 ----RAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT-------------SSYTA 106
R+G SG+G S G +G + G+ ++ +G S ++
Sbjct: 948 FGQHRSGSGQSSGFGQHGSGSGQSSGFGQHESGSGKSSGFGQHESRSSQSNYGQHGSGSS 1007
Query: 107 QEYGAGTYGASSTTSTG-RSSQSSSQQFSGIGRSG 140
Q G G +G+SS +TG +SSS Q+SG G+ G
Sbjct: 1008 QSSGYGQHGSSSGQTTGFGQHRSSSGQYSGFGQHG 1042
Score = 40.0 bits (92), Expect = 0.001
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 14/142 (9%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
G G + G+S Y SS ++ + Y R+ G G S S +G
Sbjct: 605 GFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQ 664
Query: 68 ANGSGYGSPNSAFGAQAGQY--TYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTG-- 123
++G G S + GQ+ G +YG +G+S Q G G +G+SS ++G
Sbjct: 665 SSGFGQHVSGSGQSSGFGQHESRSGHSSYGQHGFGSS----QSSGYGQHGSSSGQTSGFG 720
Query: 124 ----RSSQSSS--QQFSGIGRS 139
S QSSS Q SG G+S
Sbjct: 721 QHELSSGQSSSFGQHGSGSGQS 742
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 9/130 (6%)
Query: 9 GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETD----- 63
G G G ++ T S ++ Y+ + G G S+ Y
Sbjct: 1042 GSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHGSGSSQSSGYGQHGSNSGQTSG 1101
Query: 64 ----RAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASST 119
R G SG+G S G +G +G GT ++ + Y + + G +G S+
Sbjct: 1102 FGQHRPGSGQSSGFGQYGSGSGQSSGFGQHGSGTGKSSGFAQHEYRSGQSSYGQHGTGSS 1161
Query: 120 TSTGRSSQSS 129
S+G S
Sbjct: 1162 QSSGCGQHES 1171
Score = 38.9 bits (89), Expect = 0.002
Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 12/168 (7%)
Query: 9 GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETD----- 63
G G G G ++ + S ++ ++ + G G S+ Y +
Sbjct: 965 GSGSGQSSGFGQHESGSGKSSGFGQHESRSSQSNYGQHGSGSSQSSGYGQHGSSSGQTTG 1024
Query: 64 ----RAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASST 119
R+ SG+G S +G +G G+ ++ +G +++ G +G+ S+
Sbjct: 1025 FGQHRSSSGQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHGSGSS 1084
Query: 120 TSTGRSSQ-SSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQ 166
S+G S+S Q SG G+ +P S F Q + GQ
Sbjct: 1085 QSSGYGQHGSNSGQTSGFGQ--HRPGSGQSSGFGQYGSGSGQSSGFGQ 1130
Score = 38.1 bits (87), Expect = 0.004
Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 8/139 (5%)
Query: 9 GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYA 68
G G G ++ + S ++ ++ + G G S+ Y + +G+
Sbjct: 509 GSVSGQSSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGSGSSQSSGYGQYGSRETSGFG 568
Query: 69 N-------GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTS 121
+G+G S G +G +G G+ ++ +G + + G + + S+ S
Sbjct: 569 QHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQS 628
Query: 122 TGRSSQSSSQQFSGIGRSG 140
+G Q S+Q SG G+ G
Sbjct: 629 SG-YGQHGSRQTSGFGQHG 646
Score = 38.1 bits (87), Expect = 0.004
Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Query: 9 GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETD----- 63
G G G G ++ + S ++ ++ + G G S+ Y +
Sbjct: 811 GSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTSG 870
Query: 64 ----RAGYANGSGYGSPNSAFGAQA--GQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGAS 117
R+ SG+G S G + GQ+ G G Y S YG G+S
Sbjct: 871 FGQHRSSSGQYSGFGQHGSGSGQSSGFGQHGTGSGQYSGFGQHESRSHQSSYGQHGSGSS 930
Query: 118 STTSTGRSSQSSSQQFS-GIGRSG 140
++ G+ SS Q F G RSG
Sbjct: 931 QSSGYGQHGSSSGQTFGFGQHRSG 954
Score = 37.7 bits (86), Expect = 0.006
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
G G + +S Y S ++ + Y R G G S T Y
Sbjct: 530 GFGQHESRSRQSSYGQHGSGSSQSSGYGQYGSRETSGFGQHGLGSGQS------TGFGQY 583
Query: 68 ANGSGYGSPNSAFGAQAGQYT-YGQ--GTYGAAAYGT-SSYTAQEYGAGTYGASSTTSTG 123
+GSG S G+ +GQ + +GQ G ++YG SS ++Q G G +G+ T+ G
Sbjct: 584 GSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFG 643
Query: 124 RSSQSSSQQFSGIGRSG 140
+ SSQ +G G+ G
Sbjct: 644 QHGSGSSQS-TGFGQYG 659
Score = 35.0 bits (79), Expect = 0.036
Identities = 40/144 (27%), Positives = 53/144 (36%), Gaps = 33/144 (22%)
Query: 14 GKGGRSRYRTTS---SANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANG 70
G GG S TS S + + + + + G D GRR A GY+N
Sbjct: 236 GHGGLSCGLETSGHESNSTQSRIREQKLGSSCSGSGDSGRRSHA----------CGYSNS 285
Query: 71 SGYGSPNSA--------FGAQAGQYTYGQ-----GTYGAAAYGTSSYTAQEYGAGTYGAS 117
SG G P +A FG Q Q++Y Q G G +G S G
Sbjct: 286 SGCGRPQNASSSCQSHRFGGQGNQFSYIQSGCQSGIKGGQGHGCVS-------GGQPSGC 338
Query: 118 STTSTGRSSQSSSQQFSGIGRSGQ 141
+ SQS SQ+ G +GQ
Sbjct: 339 GQPESNPCSQSYSQRGYGARENGQ 362
Score = 35.0 bits (79), Expect = 0.036
Identities = 34/133 (25%), Positives = 46/133 (34%), Gaps = 8/133 (6%)
Query: 6 HRGGGGGGGKGGRS---RYRTT--SSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
H G G+ G S R+ TT + + + RG + GRR S
Sbjct: 2051 HGQAGSQHGESGSSVHERHGTTHGQTGDTTRHAHSGHGQSTQRGSRTAGRRGSGHSESSD 2110
Query: 61 ETDRAGYAN---GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGAS 117
+G ++ G YG S G QGT T+ + +G T S
Sbjct: 2111 SEVHSGVSHTHSGHTYGQARSQHGESGSAIHGRQGTIHGQTGDTTRHGQSGHGQSTQTGS 2170
Query: 118 STTSTGRSSQSSS 130
TT RSS S S
Sbjct: 2171 RTTGRQRSSHSES 2183
Score = 34.7 bits (78), Expect = 0.047
Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 10/141 (7%)
Query: 9 GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDR--SETDRAG 66
G G G G ++ + S ++ ++ G G S+ Y S +G
Sbjct: 659 GSGSGQSSGFGQHVSGSGQSSGFGQHESRSGHSSYGQHGFGSSQSSGYGQHGSSSGQTSG 718
Query: 67 YAN-------GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASST 119
+ S +G S G +G +G G+ ++ +G + + G + + S+
Sbjct: 719 FGQHELSSGQSSSFGQHGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSS 778
Query: 120 TSTGRSSQSSSQQFSGIGRSG 140
S+G Q S+Q SG G+ G
Sbjct: 779 QSSG-YGQHGSRQTSGFGQHG 798
Score = 34.7 bits (78), Expect = 0.047
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 65 AGYANGSG-YGS---PNSAFG---AQAGQYTYGQ---GTYGAAAYGTSSYTAQEYGAGTY 114
+G ++G G +GS +S FG +++GQ +YGQ G+ ++ YG + Q G G +
Sbjct: 739 SGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHG-SRQTSGFGQH 797
Query: 115 GASSTTSTGRSSQ-SSSQQFSGIGRSG 140
G+ S+ STG S S Q +G G+ G
Sbjct: 798 GSGSSQSTGFGQYGSGSGQSAGFGQHG 824
Score = 33.9 bits (76), Expect = 0.080
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 66 GYANGSGYGSPNSAFGAQA--GQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTG 123
G + SG G S G GQ+ G + ++ S + Q G G YG+ S STG
Sbjct: 1159 GSSQSSGCGQHESGSGPTTSFGQHVSGSDNFSSSGQHISD-SGQSTGFGQYGSGSGQSTG 1217
Query: 124 RSSQSSSQQFSGIGRSGQQ 142
S Q SG G+Q
Sbjct: 1218 LGQGESQQVESGSTVHGRQ 1236
Score = 32.7 bits (73), Expect = 0.18
Identities = 22/90 (24%), Positives = 32/90 (35%)
Query: 41 RLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYG 100
R G + G + + S + ++ G +G S G GT
Sbjct: 1794 RTTGRRSSGHSEYSDSEGHSGFSQRPHSRGHTHGQAGSQHGESESIVDERHGTTHGQTGD 1853
Query: 101 TSSYTAQEYGAGTYGASSTTSTGRSSQSSS 130
TS ++ +G T SSTT RS S S
Sbjct: 1854 TSGHSQSGHGQSTQSGSSTTGRRRSGHSES 1883
Score = 28.9 bits (63), Expect = 2.6
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 24/109 (22%)
Query: 43 RGVKDGGRRDSA-------------SYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTY 89
RG + GRR S S+R +S+ G A GS +G S + G T+
Sbjct: 1412 RGSRTTGRRGSGHSESSDSEVHSGGSHRPQSQEQTHGQA-GSQHGESGSTVHGRHGT-TH 1469
Query: 90 GQGTYGAAAYGTSSYTAQEYGAGTYGASSTT---STGRSSQSSSQQFSG 135
GQ T+ + +G T SSTT +G S S S+ SG
Sbjct: 1470 GQ------TGDTTRHAHYHHGKSTQRGSSTTGRRGSGHSESSDSEVHSG 1512
Score = 28.1 bits (61), Expect = 4.4
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 11/117 (9%)
Query: 51 RDSASYRDRSETDRAGYANGSGYGSPNSAFGA---QAGQYTYG-QGTYGAAAYGTSSYTA 106
R +S+ + S+++ A+ + G +S G+ Q+G +G QGT T+ +
Sbjct: 2175 RQRSSHSESSDSEVHSEASPTHSGHTHSQAGSRHGQSGSSGHGRQGTTHGQTGDTTRHAH 2234
Query: 107 QEYGAGTYGASSTT---STGRSSQSSSQ--QFSGIGRSGQQPQPLMSQQFAQPPGAT 158
YG T S TT +G S S S+ + SG SQQ + PG+T
Sbjct: 2235 YGYGQSTQRGSRTTGRRGSGHSESSDSEVHSWGSHTHSGHIQGQAGSQQ--RQPGST 2289
>gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
Length = 614
Score = 43.5 bits (101), Expect = 1e-04
Identities = 52/175 (29%), Positives = 71/175 (40%), Gaps = 40/175 (22%)
Query: 1 MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
+QLV+ RG G G+GG M D DR G + G ++RDR
Sbjct: 472 LQLVEDRGSGRSRGRGG---------------MKDDRRDRYSAGKRGGFN----TFRDRE 512
Query: 61 ETDRAGYANGSGYGS-PNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAG---TYGA 116
DR GY S FGA+ G Y AA Y S+ + AG ++
Sbjct: 513 NYDR-------GYSSLLKRDFGAKT-----QNGVYSAANYTNGSFGSNFVSAGIQTSFRT 560
Query: 117 SSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQ-FAQP-PGATNMIGYMGQTAY 169
+ T T ++ S+QQ+ G + M+QQ +A P A MIGY T Y
Sbjct: 561 GNPTGTYQNGYDSTQQY---GSNVPNMHNGMNQQAYAYPATAAAPMIGYPMPTGY 612
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 43.5 bits (101), Expect = 1e-04
Identities = 51/183 (27%), Positives = 65/183 (35%), Gaps = 45/183 (24%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
GGGGGGG GG G GG A AG
Sbjct: 249 GGGGGGGGGGGG------------------------GSGGGGGGGGAG---------AGG 275
Query: 68 ANGSGYGSPNSAFGAQAGQYTYGQGTYG--AAAYGTSSYTAQE-----YGAGTYGASSTT 120
A + +A A AG G G YG +A YG S Q+ G G GA+S +
Sbjct: 276 AGAGAVAAAAAAAAAAAG--GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS 333
Query: 121 STGRSSQSSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPP 179
S + Q+F+G + P ++Q P + M Y G P PPPP
Sbjct: 334 KAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSP--SPMMRSYGGSYPEYSSPSAPPPP 391
Query: 180 PSR 182
PS+
Sbjct: 392 PSQ 394
Score = 42.0 bits (97), Expect = 3e-04
Identities = 41/178 (23%), Positives = 59/178 (33%), Gaps = 34/178 (19%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
GGGGGGG GG A G + + + AG
Sbjct: 252 GGGGGGGGGGSGGGGGGGGAG-----------------AGGAGAGAVAAAAAAAAAAAGG 294
Query: 68 ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQ 127
G GYG ++ +G + G G G G GA+S + S
Sbjct: 295 GGGGGYGGSSAGYGVLSSPRQQGGGMM--------------MGPGGGGAASLSKAAAGSA 340
Query: 128 SSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIG--YMGQTAYQYPPPPPPPPPSR 182
+ Q+F+G + P ++Q P G Y ++ PPPPP P S+
Sbjct: 341 AGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 43.5 bits (101), Expect = 1e-04
Identities = 51/183 (27%), Positives = 65/183 (35%), Gaps = 45/183 (24%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
GGGGGGG GG G GG A AG
Sbjct: 249 GGGGGGGGGGGG------------------------GSGGGGGGGGAG---------AGG 275
Query: 68 ANGSGYGSPNSAFGAQAGQYTYGQGTYG--AAAYGTSSYTAQE-----YGAGTYGASSTT 120
A + +A A AG G G YG +A YG S Q+ G G GA+S +
Sbjct: 276 AGAGAVAAAAAAAAAAAG--GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS 333
Query: 121 STGRSSQSSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPP 179
S + Q+F+G + P ++Q P + M Y G P PPPP
Sbjct: 334 KAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSP--SPMMRSYGGSYPEYSSPSAPPPP 391
Query: 180 PSR 182
PS+
Sbjct: 392 PSQ 394
Score = 42.0 bits (97), Expect = 3e-04
Identities = 41/178 (23%), Positives = 59/178 (33%), Gaps = 34/178 (19%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
GGGGGGG GG A G + + + AG
Sbjct: 252 GGGGGGGGGGSGGGGGGGGAG-----------------AGGAGAGAVAAAAAAAAAAAGG 294
Query: 68 ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQ 127
G GYG ++ +G + G G G G GA+S + S
Sbjct: 295 GGGGGYGGSSAGYGVLSSPRQQGGGMM--------------MGPGGGGAASLSKAAAGSA 340
Query: 128 SSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIG--YMGQTAYQYPPPPPPPPPSR 182
+ Q+F+G + P ++Q P G Y ++ PPPPP P S+
Sbjct: 341 AGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 43.5 bits (101), Expect = 1e-04
Identities = 51/183 (27%), Positives = 65/183 (35%), Gaps = 45/183 (24%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
GGGGGGG GG G GG A AG
Sbjct: 249 GGGGGGGGGGGG------------------------GSGGGGGGGGAG---------AGG 275
Query: 68 ANGSGYGSPNSAFGAQAGQYTYGQGTYG--AAAYGTSSYTAQE-----YGAGTYGASSTT 120
A + +A A AG G G YG +A YG S Q+ G G GA+S +
Sbjct: 276 AGAGAVAAAAAAAAAAAG--GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS 333
Query: 121 STGRSSQSSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPP 179
S + Q+F+G + P ++Q P + M Y G P PPPP
Sbjct: 334 KAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSP--SPMMRSYGGSYPEYSSPSAPPPP 391
Query: 180 PSR 182
PS+
Sbjct: 392 PSQ 394
Score = 42.0 bits (97), Expect = 3e-04
Identities = 41/178 (23%), Positives = 59/178 (33%), Gaps = 34/178 (19%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
GGGGGGG GG A G + + + AG
Sbjct: 252 GGGGGGGGGGSGGGGGGGGAG-----------------AGGAGAGAVAAAAAAAAAAAGG 294
Query: 68 ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQ 127
G GYG ++ +G + G G G G GA+S + S
Sbjct: 295 GGGGGYGGSSAGYGVLSSPRQQGGGMM--------------MGPGGGGAASLSKAAAGSA 340
Query: 128 SSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIG--YMGQTAYQYPPPPPPPPPSR 182
+ Q+F+G + P ++Q P G Y ++ PPPPP P S+
Sbjct: 341 AGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 43.1 bits (100), Expect = 1e-04
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 49 GRRDSASYRDRSETDR-AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
GR S S R S +G SG+G S+ G + +G G+ ++ YG +
Sbjct: 1612 GRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSG 1671
Query: 108 EYGAGTYGASSTTSTGRSSQ--SSSQQFSGIGR----SGQQP 143
+ G SS+ S+ R Q S S+Q SG GR SGQ P
Sbjct: 1672 QSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSP 1713
Score = 42.0 bits (97), Expect = 3e-04
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 49 GRRDSASYRDRSETDRA-GYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
GR S S R S G SG+G S+ G + +G G+ ++ YG +
Sbjct: 2082 GRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSG 2141
Query: 108 EYGAGTYGASSTTSTGRSSQ--SSSQQFSGIGRSG 140
+ G SS+ S+ R Q S S+Q SG GR G
Sbjct: 2142 QSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQG 2176
Score = 40.8 bits (94), Expect = 7e-04
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 49 GRRDSASYRDRSETDR-AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
GR S S R S +G SG+G S+ G + +G G+ ++ YG +
Sbjct: 2552 GRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSG 2611
Query: 108 EYGAGTYGASSTTSTGRSSQ--SSSQQFSGIGR----SGQQP 143
+ G SS+ S+ Q S S+Q SG GR SGQ P
Sbjct: 2612 QSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSP 2653
Score = 40.4 bits (93), Expect = 9e-04
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 49 GRRDSASYRDRSETDR-AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
GR S S R S +G SG+G S+ G + +G G+ ++ YG +
Sbjct: 1142 GRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSG 1201
Query: 108 EYGAGTYGASSTTSTGRSSQ--SSSQQFSGIGRSG 140
+ G SS+ S+ Q S S+Q SG GR G
Sbjct: 1202 QSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQG 1236
Score = 37.0 bits (84), Expect = 0.009
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 48 GGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT-SSYTA 106
G +SY +G SG+G S G +G +G G+ +++ G S +
Sbjct: 323 GQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSG 382
Query: 107 QEYGAGTYGASSTTSTGRSS-QSSSQQFSGIGR----SGQQP 143
Q +G +G+SS S+ +S+S+ SG G+ SGQ P
Sbjct: 383 QASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSP 424
Score = 37.0 bits (84), Expect = 0.009
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 15/162 (9%)
Query: 10 GGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDR-AGYA 68
G G+ S +SS + + + G GR S S + R +G
Sbjct: 845 GSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASG---RGRHGSGSGQSPGHGQRGSGSG 901
Query: 69 NGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQS 128
YG S G + +G G+ ++ +G S + Q G +G+ S S
Sbjct: 902 QSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSG-------SGHS 954
Query: 129 SSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQ 170
SS + G RSGQ + S+Q G+++ G G + Q
Sbjct: 955 SSYEQHG-SRSGQSSR---SEQHGSSSGSSSSYGQHGSGSRQ 992
Score = 36.6 bits (83), Expect = 0.012
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 49 GRRDSASYRDRS-ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
G+ S S + S +T +G SG+ S+ G +G +G G+ ++ YG +
Sbjct: 206 GQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSG 265
Query: 108 EYGAGTYGASSTTSTGRSSQ--SSSQQFSGIGRSG 140
+ G SS+ S+ Q S S+Q G GR G
Sbjct: 266 QSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQG 300
Score = 35.4 bits (80), Expect = 0.028
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 49 GRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQE 108
G +S+S + S + + +GSG+ S G+++GQ + G+ +G+SS ++
Sbjct: 1168 GHHESSSGQSSSYSQ---HGSGSGHSSGYGQHGSRSGQSSRGE------RHGSSSGSSSH 1218
Query: 109 YGAGTYGASSTTSTGRS------SQSSSQQFSGIGRSGQQPQ 144
YG G+ ++ GR S S + SG+G S Q
Sbjct: 1219 YGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQ 1260
Score = 35.4 bits (80), Expect = 0.028
Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 18/178 (10%)
Query: 10 GGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKD--GGRRDSASYRD---RSETDR 64
G G G S + S + + + + G G S+SY RS
Sbjct: 1379 GSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSS 1438
Query: 65 AGYANGSGYGSPNSAFG--AQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGT--------Y 114
G +GS GS +S++G + + G G +G+ + + S + +G+G+ Y
Sbjct: 1439 RGERHGSSSGS-SSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPY 1497
Query: 115 GASSTTSTGRSS-QSSSQQFSGIG-RSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQ 170
G+ S S+ R +S S SG+G R + Q Q G ++ G G T+ Q
Sbjct: 1498 GSGSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQ 1555
Score = 35.0 bits (79), Expect = 0.036
Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 18/136 (13%)
Query: 7 RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAG 66
R G G G YR+ S ++ RG + G S+ R R+G
Sbjct: 1013 RHGSGSGQSSSYGPYRSGSGWSSS------------RGPYESGSGHSSGLGHRES--RSG 1058
Query: 67 YANGSGYGSPNSAFGAQAGQY--TYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGR 124
++G G +S + GQ+ T GQ + +G SS + +G G+S ++ GR
Sbjct: 1059 QSSGYGQHGSSSGHSSTHGQHGSTSGQSS-SCGQHGASSGQSSSHGQHGSGSSQSSGYGR 1117
Query: 125 SSQSSSQQFSGIGRSG 140
S S Q G G+ G
Sbjct: 1118 QG-SGSGQSPGHGQRG 1132
Score = 35.0 bits (79), Expect = 0.036
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 6 HRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECD-RRLRGVKDGGRRDSASYRDRSETDR 64
H G G R R+ + S ++ Y RG + G S+ R R
Sbjct: 1469 HGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGLGHRES--R 1526
Query: 65 AGYANGSGYGSPNSAFGAQAGQY--TYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTST 122
+G ++G G +S + GQ+ T GQ + +G SS + +G G+S ++
Sbjct: 1527 SGQSSGYGQHGSSSGHSSTHGQHGSTSGQSS-SCGQHGASSGQSSSHGQHGSGSSQSSGY 1585
Query: 123 GRSSQSSSQQFSGIGRSG 140
GR S S Q G G+ G
Sbjct: 1586 GRQG-SGSGQSPGHGQRG 1602
Score = 34.7 bits (78), Expect = 0.047
Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 18/178 (10%)
Query: 10 GGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKD--GGRRDSASYRD---RSETDR 64
G G G S + S + + + + G G S+SY RS
Sbjct: 2319 GSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSS 2378
Query: 65 AGYANGSGYGSPNSAFG--AQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGT--------Y 114
G +GS GS +S++G + + G G +G+ + + S + +G+G+ Y
Sbjct: 2379 RGERHGSSSGS-SSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPY 2437
Query: 115 GASSTTSTGRSS-QSSSQQFSGIG-RSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQ 170
G+ S S+ R +S S SG+G R + Q Q G ++ G G T+ Q
Sbjct: 2438 GSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQ 2495
Score = 34.7 bits (78), Expect = 0.047
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 6 HRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECD-RRLRGVKDGGRRDSASYRDRSETDR 64
H G G R R+ + S ++ Y RG + G S+ R R
Sbjct: 2409 HGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRES--R 2466
Query: 65 AGYANGSGYGSPNSAFGAQAGQY--TYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTST 122
+G ++G G +S + GQ+ T GQ + +G SS + +G G+S ++
Sbjct: 2467 SGQSSGYGQHGSSSGHSSTHGQHGSTSGQSS-SCGQHGASSGQSSSHGQHGSGSSQSSGY 2525
Query: 123 GRSSQSSSQQFSGIGRSG 140
GR S S Q G G+ G
Sbjct: 2526 GRQG-SGSGQSPGHGQRG 2542
Score = 34.3 bits (77), Expect = 0.061
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 26/159 (16%)
Query: 2 QLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDR-- 59
Q H G G + + + S +P+ RG G S+SY
Sbjct: 1802 QSSSHGQHGSGSSQSSSYGQQGSGSGQSPS-----------RGRHGSGSGHSSSYGQHGS 1850
Query: 60 -----SETDRAGYANG--SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAG 112
S + R G +G SG+G S+ +G +G G+ +++Y + + G
Sbjct: 1851 GSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRG 1910
Query: 113 TYGASSTTSTGRSSQ--SSSQQFSGIGR----SGQQPQP 145
SS+ S+ Q S S+Q G G+ SGQ P P
Sbjct: 1911 EQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP 1949
Score = 33.9 bits (76), Expect = 0.080
Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 6 HRGGGGGGGKG-GRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDR----- 59
HRG G G GR S +P+ RG G S+SY
Sbjct: 1338 HRGSGSSQSSGYGR---HGAGSGQSPS-----------RGRHGSGSGHSSSYGQHGSGSG 1383
Query: 60 --SETDRAGYANG--SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYG 115
S + R G +G SG+G S+ +G +G G+ +++Y + + G
Sbjct: 1384 WSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERH 1443
Query: 116 ASSTTSTGRSSQ--SSSQQFSGIGR----SGQQPQP 145
SS+ S+ Q S S+Q G G+ SGQ P P
Sbjct: 1444 GSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP 1479
Score = 33.9 bits (76), Expect = 0.080
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 26/159 (16%)
Query: 2 QLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDR-- 59
Q H G G + + + S +P+ RG G S+SY
Sbjct: 2272 QSSSHGQHGSGSSQSSSYGQQGSGSGQSPS-----------RGRHGSGSGHSSSYGQHGS 2320
Query: 60 -----SETDRAGYANG--SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAG 112
S + R G +G SG+G S+ +G +G G+ +++Y + + G
Sbjct: 2321 GSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRG 2380
Query: 113 TYGASSTTSTGRSSQ--SSSQQFSGIGR----SGQQPQP 145
SS+ S+ Q S S+Q G G+ SGQ P P
Sbjct: 2381 ERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP 2419
Score = 33.5 bits (75), Expect = 0.10
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 36 DECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQ--AGQYTYGQGT 93
D R +RG G +S S R + D +G N Y +S++G Q + G+G
Sbjct: 138 DSYSRNVRGSLKPGT-ESISRRLSFQRDFSGQHNS--YSGQSSSYGEQNSDSHQSSGRGQ 194
Query: 94 YGAAAYGTSSYTAQEYGAG------TYGASSTTSTGRSS-QSSSQQFSGIGRSG 140
G+ + + +Y G+G T+G+ S S+G S +SSS Q SG + G
Sbjct: 195 CGSGSGQSPNYGQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHG 248
Score = 33.5 bits (75), Expect = 0.10
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 17/134 (12%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
G G G G S Y S ++ + Y+ K G R +S RSE +
Sbjct: 700 GFGHKSGSGQSSGYSQHGSGSSHSSGYR----------KHGSRSGQSS---RSEQHGSSS 746
Query: 68 ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAA---YGTSSYTAQEYGAGTYGASSTTSTGR 124
S YG S +G G G+ + + +G+SS + +G G S ++S G
Sbjct: 747 GLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSSCGH 806
Query: 125 SSQSSSQQFSGIGR 138
+S S Q SG G+
Sbjct: 807 -YESGSGQASGFGQ 819
Score = 33.5 bits (75), Expect = 0.10
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 65 AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT-SSYTAQEYGAGTYGASSTTSTG 123
+G + SGYG S G G G G+ + +YG S + + +G +G+ S+G
Sbjct: 1107 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSG 1166
Query: 124 ------RSSQSS--SQQFSGIGRS 139
S QSS SQ SG G S
Sbjct: 1167 FGHHESSSGQSSSYSQHGSGSGHS 1190
Score = 33.5 bits (75), Expect = 0.10
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 65 AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT-SSYTAQEYGAGTYGASSTTSTG 123
+G + SGYG S G G G G+ + +YG S + + +G +G+ S+G
Sbjct: 1577 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSG 1636
Query: 124 ------RSSQSS--SQQFSGIGRS 139
S QSS SQ SG G S
Sbjct: 1637 FGHHESSSGQSSSYSQHGSGSGHS 1660
Score = 33.5 bits (75), Expect = 0.10
Identities = 36/145 (24%), Positives = 57/145 (39%), Gaps = 15/145 (10%)
Query: 7 RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAG 66
R G G G G + ++S ++ + + G R +S R E +
Sbjct: 1860 RHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSS---RGEQHGSS 1916
Query: 67 YANGSGYGSPNSAFGAQAGQYTYGQGTYGAAA-----YGTSSYTAQEYGAGTYGASSTTS 121
+ S YG S G +G G+ + + +G+ S + Y G YG+ S S
Sbjct: 1917 SGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSY--GPYGSGSGWS 1974
Query: 122 TGRSS-QSSSQQFSGIG----RSGQ 141
+ R +S S SG+G RSGQ
Sbjct: 1975 SSRGPYESGSGHSSGLGHRESRSGQ 1999
Score = 33.5 bits (75), Expect = 0.10
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 32/165 (19%)
Query: 7 RGGGGGGGKGGRSRYRTTSSANNPNLMY------QDECDRRLRGVKDGGRRDSASYRDRS 60
RG G G S Y S + +L + + RG G S+SY
Sbjct: 1909 RGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYG 1968
Query: 61 E-----TDRAGYANGSGYGSPNSAFGAQAGQYT-YGQ-----------GTYGAAA----- 98
+ R Y +GSG+ S +++GQ + YGQ G +G+A+
Sbjct: 1969 SGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSS 2028
Query: 99 ---YGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSG 140
+G SS + +G G+S ++ GR S S Q G G+ G
Sbjct: 2029 CGQHGASSGQSSSHGQHGSGSSQSSGYGRQG-SGSGQSPGHGQRG 2072
Score = 33.5 bits (75), Expect = 0.10
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 65 AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT-SSYTAQEYGAGTYGASSTTSTG 123
+G + SGYG S G G G G+ + +YG S + + +G +G+ S+G
Sbjct: 2517 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSG 2576
Query: 124 ------RSSQSS--SQQFSGIGRS 139
S QSS SQ SG G S
Sbjct: 2577 FGHHESSSGQSSSYSQHGSGSGHS 2600
Score = 33.1 bits (74), Expect = 0.14
Identities = 42/177 (23%), Positives = 62/177 (35%), Gaps = 20/177 (11%)
Query: 12 GGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGS 71
G G + +SS ++ G G R S R + AG + S
Sbjct: 458 GSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAG--SSS 515
Query: 72 GYGSPNSAFGAQAGQYTYGQGT----------YGAAAYGTSSYTAQEYGA------GTYG 115
YG S G +G G+ + + + +SSY YG+ G Y
Sbjct: 516 SYGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYE 575
Query: 116 ASSTTSTGRSSQSS-SQQFSGIGRSGQQPQPLMSQ-QFAQPPGATNMIGYMGQTAYQ 170
+ S S+G Q S S Q SG G+ G + Q G ++ G G T+ Q
Sbjct: 576 SGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQ 632
Score = 33.1 bits (74), Expect = 0.14
Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 10/167 (5%)
Query: 10 GGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYAN 69
G G G+ ++++S ++ + + G R +S RSE + +
Sbjct: 923 GSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSS---RSEQHGSSSGS 979
Query: 70 GSGYGSPNSAFGAQAGQYTYGQGTYGAAA-----YGTSSYTAQEYGAGTYGASSTTSTGR 124
S YG S G +G G+ + + +G+ S + YG G+ ++S G
Sbjct: 980 SSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRG- 1038
Query: 125 SSQSSSQQFSGIG-RSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQ 170
+S S SG+G R + Q Q G ++ G G T+ Q
Sbjct: 1039 PYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQ 1085
Score = 33.1 bits (74), Expect = 0.14
Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 10/142 (7%)
Query: 7 RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAG 66
R G G +G S + + + L + + G R R +
Sbjct: 1227 RQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 1286
Query: 67 YANGSGYGSPNSAFGAQAGQYTYGQGTYGAAA--------YGTSSYTAQEYGAGTYGASS 118
+ +GSG+ S S G+ +G + QG +G+ + G+S+ + YG G+S
Sbjct: 1287 HESGSGHSSAYSQHGSGSGHFC-SQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQ 1345
Query: 119 TTSTGRSSQSSSQQFSGIGRSG 140
++ GR S Q S GR G
Sbjct: 1346 SSGYGRHGAGSGQSPSR-GRHG 1366
Score = 33.1 bits (74), Expect = 0.14
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 65 AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT------SSYTAQEYGAGTYGASS 118
+G + SGYG S G G G G+ + +YG S ++ ++G G G SS
Sbjct: 2047 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPG-LGESS 2105
Query: 119 -----TTSTGRSSQ-----SSSQQFSGIGRSGQQP-QPLMSQQFAQPPGATNMIGYMGQT 167
+S+G+SS S S SG G+ G + Q ++ G+++ G G
Sbjct: 2106 GFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSG 2165
Query: 168 AYQ 170
+ Q
Sbjct: 2166 SRQ 2168
Score = 33.1 bits (74), Expect = 0.14
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 17/119 (14%)
Query: 67 YANGSGYGSPNSAFGAQAGQYTYGQGTYGAAA--------YGTSSYTAQEYGAGTYGASS 118
+ +GSG+ S S G+ +G + QG +G+ + G+S+ + YG G+S
Sbjct: 2697 HESGSGHSSAYSQHGSGSGHFC-SQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQ 2755
Query: 119 TTSTGRSSQSSSQQF------SGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQY 171
++ GR S Q SG G+S Q Q G + GQ Y Y
Sbjct: 2756 SSGYGRHGAGSGQSLSHGRHGSGSGQSSSYGQ--HGSGSGQSSGYSQHGSGSGQDGYSY 2812
Score = 30.4 bits (67), Expect = 0.89
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 65 AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGR 124
+G SG+G S+ +G +G G+ ++ +G + + G SS S+
Sbjct: 457 SGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSS 516
Query: 125 SSQ--SSSQQFSGIGR----SGQQPQP 145
Q S S+Q G R SGQ P P
Sbjct: 517 YGQHGSGSRQSLGHSRHGSGSGQSPSP 543
Score = 30.4 bits (67), Expect = 0.89
Identities = 41/169 (24%), Positives = 64/169 (37%), Gaps = 12/169 (7%)
Query: 11 GGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANG 70
G G G S + +T + C + G G + S G
Sbjct: 596 GYGQHGSSSGHSSTHGQHGSTSGQSSSCGQH--GATSGQSSSHGQHGSGSSQSSRYGQQG 653
Query: 71 SGYG-SPN-----SAFGAQAGQYTYGQGTYGAAAYGT-SSYTAQEYGAGTYGASSTTSTG 123
SG G SP+ S FG + +G G+ +++ G S + Q G G + + S S+G
Sbjct: 654 SGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVSGQSSGFG-HKSGSGQSSG 712
Query: 124 RSSQ-SSSQQFSGIGRSGQQP-QPLMSQQFAQPPGATNMIGYMGQTAYQ 170
S S S SG + G + Q S+Q G ++ G G ++Q
Sbjct: 713 YSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQ 761
Score = 30.0 bits (66), Expect = 1.2
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 21/88 (23%)
Query: 53 SASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAG 112
S+SY R +G + SGYG GA +GQ + G +G+ + +SSY G
Sbjct: 2743 SSSYGHRG----SGSSQSSGYG----RHGAGSGQ-SLSHGRHGSGSGQSSSY-------G 2786
Query: 113 TYGASSTTSTGRSSQSSSQQFSGIGRSG 140
+G+ S S+G SQ SG G+ G
Sbjct: 2787 QHGSGSGQSSG-----YSQHGSGSGQDG 2809
Score = 29.3 bits (64), Expect = 2.0
Identities = 35/134 (26%), Positives = 52/134 (38%), Gaps = 14/134 (10%)
Query: 16 GGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDR--AGYANGSGY 73
G S Y S + + Y R G G R +S R S + +G SG+
Sbjct: 1645 GQSSSYSQHGSGSGHSSGYGQHGSRS--GQSSRGERHGSSSRSSSRYGQHGSGSRQSSGH 1702
Query: 74 GSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASST-TSTGRSSQSS--S 130
G S G + +G G ++++G ++G+G+ +SS RS SS
Sbjct: 1703 GRQGSGSGQSPSRGRHGSGLGHSSSHG-------QHGSGSGRSSSRGPYESRSGHSSVFG 1755
Query: 131 QQFSGIGRSGQQPQ 144
Q SG G S Q
Sbjct: 1756 QHESGSGHSSAYSQ 1769
Score = 28.9 bits (63), Expect = 2.6
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 26/139 (18%)
Query: 9 GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYA 68
G G G G ++ + S ++ RG + G S+S R +G
Sbjct: 2124 GSGSGHSSGYGQHGSRSGQSS-------------RGERHGSSSGSSS---RYGQHGSGSR 2167
Query: 69 NGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASST-TSTGRSSQ 127
SG+G S G + +G G+ ++++G ++G+G+ +SS RS
Sbjct: 2168 QSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHG-------QHGSGSGRSSSRGPYESRSGH 2220
Query: 128 SS--SQQFSGIGRSGQQPQ 144
SS Q SG G S Q
Sbjct: 2221 SSVFGQHESGSGHSSAYSQ 2239
Score = 28.5 bits (62), Expect = 3.4
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 18/148 (12%)
Query: 7 RGGGGGGGKGGRSRYRTTSSANNPNLMYQD--ECDRRLRGVKDGGRRDSASYRDRSETDR 64
R G G G R R+ ++S ++ + + C G + G ++ +
Sbjct: 767 RQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSSC-GHYESGSGQASGFGQHESGSG 825
Query: 65 AGYANGSGYGSPNSAFGAQAGQ-YTYGQ----GTYGAAAYGTSSYTAQE------YGAGT 113
GY S +GS + F +Q T GQ G + +++ +SSY E G G
Sbjct: 826 QGY---SQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGR 882
Query: 114 YGASSTTSTGRSSQ-SSSQQFSGIGRSG 140
+G+ S S G + S S Q GR G
Sbjct: 883 HGSGSGQSPGHGQRGSGSGQSPSYGRHG 910
Score = 27.3 bits (59), Expect = 7.5
Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 28/140 (20%)
Query: 9 GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYA 68
G G G G ++ + S ++ RG + G S+S+ + + G
Sbjct: 2594 GSGSGHSSGYGQHGSRSGQSS-------------RGERHGSSSGSSSHYGQHGS---GSR 2637
Query: 69 NGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQS 128
SG+G S G + +G G ++++G ++G+G+ G SS+ S
Sbjct: 2638 QSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHG-------QHGSGS-GRSSSRGPYESRLG 2689
Query: 129 SSQQF----SGIGRSGQQPQ 144
S F SG G S Q
Sbjct: 2690 HSSVFGQHESGSGHSSAYSQ 2709
>gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isoform
B1 [Homo sapiens]
Length = 353
Score = 43.1 bits (100), Expect = 1e-04
Identities = 31/101 (30%), Positives = 36/101 (35%), Gaps = 12/101 (11%)
Query: 5 DHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDR 64
D RGGGG G G S +R S RG DG +
Sbjct: 211 DSRGGGGNFGPGPGSNFRGGSDGYGSG-----------RGFGDGYNGYGGGPGGGNFGGS 259
Query: 65 AGYANG-SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSY 104
GY G GYG +G Q G Y G YG YG+ +Y
Sbjct: 260 PGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNY 300
Score = 28.1 bits (61), Expect = 4.4
Identities = 11/14 (78%), Positives = 11/14 (78%)
Query: 8 GGGGGGGKGGRSRY 21
G GG GG GGRSRY
Sbjct: 340 GSGGSGGYGGRSRY 353
>gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform A2
[Homo sapiens]
Length = 341
Score = 43.1 bits (100), Expect = 1e-04
Identities = 31/101 (30%), Positives = 36/101 (35%), Gaps = 12/101 (11%)
Query: 5 DHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDR 64
D RGGGG G G S +R S RG DG +
Sbjct: 199 DSRGGGGNFGPGPGSNFRGGSDGYGSG-----------RGFGDGYNGYGGGPGGGNFGGS 247
Query: 65 AGYANG-SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSY 104
GY G GYG +G Q G Y G YG YG+ +Y
Sbjct: 248 PGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNY 288
Score = 28.1 bits (61), Expect = 4.4
Identities = 11/14 (78%), Positives = 11/14 (78%)
Query: 8 GGGGGGGKGGRSRY 21
G GG GG GGRSRY
Sbjct: 328 GSGGSGGYGGRSRY 341
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 42.4 bits (98), Expect = 2e-04
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 3 LVDHRGGGGGGGKGGRS---RYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDR 59
L++ G GGGG+GG S Y SS + G GG +S
Sbjct: 452 LLEGEGSSGGGGRGGGSFGGGYGGGSSGGGSS------------GGGHGGGHGGSSGGGY 499
Query: 60 SETDRAGYANGSGYGSPNSAFG---AQAGQYTYGQ-----GTYGAAAYGTSSYTAQEYGA 111
G ++G GYG +S+ G + +G Y G G YG + G S + YG
Sbjct: 500 GGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGG 559
Query: 112 G-TYGASSTTSTGRSSQSSSQ 131
G + G ++S+G +SSS+
Sbjct: 560 GSSSGGHKSSSSGSVGESSSK 580
Score = 38.1 bits (87), Expect = 0.004
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 22/118 (18%)
Query: 8 GGGGGG---GKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS---- 60
GGGGGG G GG S R +SS + G GG + R S
Sbjct: 18 GGGGGGGCGGGGGVSSLRISSSKGSLG-----------GGFSSGGFSGGSFSRGSSGGGC 66
Query: 61 ---ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYG 115
+ G G G GS ++G+ + +YG G++G ++G S+ +G G +G
Sbjct: 67 FGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYG-GSFGGGSFGGGSFGGGSFGGGGFG 123
Score = 37.4 bits (85), Expect = 0.007
Identities = 25/77 (32%), Positives = 30/77 (38%)
Query: 64 RAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTG 123
R G + G GYG +S G+ G + G G YG S G G G SS+ G
Sbjct: 464 RGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHG 523
Query: 124 RSSQSSSQQFSGIGRSG 140
SS S G G
Sbjct: 524 GSSSGGYGGGSSGGGGG 540
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 41.2 bits (95), Expect = 5e-04
Identities = 39/132 (29%), Positives = 50/132 (37%), Gaps = 33/132 (25%)
Query: 7 RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAG 66
RGGGGGG G S Y + + G GG R S
Sbjct: 518 RGGGGGGYGSGGSSYGSGGGSYGS-------------GGGGGGGRGS------------- 551
Query: 67 YANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSS 126
YGS S++G+ G Y G G G +YG+ S ++ Y G+ G +S GR S
Sbjct: 552 ------YGSGGSSYGSGGGSYGSGGGGGGHGSYGSGS-SSGGYRGGSGGGGGGSSGGRGS 604
Query: 127 QSSSQQFSGIGR 138
S S GR
Sbjct: 605 GGGSSGGSIGGR 616
Score = 37.4 bits (85), Expect = 0.007
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 18/89 (20%)
Query: 70 GSGYGSPNSAFGAQAGQY-TYGQGTYGAAAYGT--SSYTA--QEYGA-------GTYGAS 117
G GYGS S++G+ G Y + G G G +YG+ SSY + YG+ G+YG+
Sbjct: 522 GGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSG 581
Query: 118 STT------STGRSSQSSSQQFSGIGRSG 140
S++ S G SS + SG G SG
Sbjct: 582 SSSGGYRGGSGGGGGGSSGGRGSGGGSSG 610
>gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]
Length = 282
Score = 40.8 bits (94), Expect = 7e-04
Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 29/184 (15%)
Query: 7 RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYR----DRSET 62
RG GGG G RSR S +P ++ R RG R + YR RS
Sbjct: 106 RGRSRGGGYGRRSRSYGRRS-RSPRRRHRS----RSRGPSCSRSRSRSRYRGSRYSRSPY 160
Query: 63 DRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYG----------AG 112
R+ Y+ SP S + Y + YG + Y +S Y+ Y +G
Sbjct: 161 SRSPYSRSRYSRSPYS-------RSRYRESRYGGSHYSSSGYSNSRYSRYHSSRSHSKSG 213
Query: 113 TYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYP 172
+ +S + ST +SS + + S + RS + + S + P + ++ + P
Sbjct: 214 SSTSSRSASTSKSSSARRSKSSSVSRSRSRSR---SSSMTRSPPRVSKRKSKSRSRSKRP 270
Query: 173 PPPP 176
P P
Sbjct: 271 PKSP 274
>gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]
Length = 582
Score = 40.4 bits (93), Expect = 9e-04
Identities = 42/158 (26%), Positives = 60/158 (37%), Gaps = 23/158 (14%)
Query: 5 DHRGGGGGGGKGGRSRYRTTSSANNPNLMYQ----DECDRRLRGVKDGGRRDSASYRDRS 60
+H GGGGG G Y + SS +L +E ++ G GGR +S SYR+
Sbjct: 61 NHSGGGGGSRFGPYESYDSRSSLGGRDLYRSGYGFNEPEQSRFGGSYGGRFES-SYRNSL 119
Query: 61 ETDRAGYANGSGYGSPNS------AFGAQAGQYTYGQ-----------GTYGAAAYGTSS 103
++ GS + +P S F G+ Y G+ GT +
Sbjct: 120 DSFGGRNQGGSSWEAPYSRSKLRPGFMEDRGRENYSSYSSFSSPHMKPAPVGSRGRGTPA 179
Query: 104 YTAQEYGAGTYGASSTTSTGRS-SQSSSQQFSGIGRSG 140
Y +G+ Y A STGR + F I R G
Sbjct: 180 YPESTFGSRNYDAFGGPSTGRGRGRGHMGDFGSIHRPG 217
>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
Length = 589
Score = 39.7 bits (91), Expect = 0.001
Identities = 31/131 (23%), Positives = 40/131 (30%), Gaps = 24/131 (18%)
Query: 7 RGGGGGGGKGGRSRYR-------------------TTSSANNPNLMYQDECDRRLRGVKD 47
RGGG GGG+ GR YR S N N ++ C++ +
Sbjct: 323 RGGGSGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPE 382
Query: 48 GGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
R +R R GY G G +G G YG Y+
Sbjct: 383 DSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDR-----SGGGYGGDRSSGGGYSGD 437
Query: 108 EYGAGTYGASS 118
G G G S
Sbjct: 438 RSGGGYGGDRS 448
Score = 35.4 bits (80), Expect = 0.028
Identities = 36/130 (27%), Positives = 40/130 (30%), Gaps = 11/130 (8%)
Query: 5 DHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSET-- 62
D GGG GG + Y S RG GG R DR
Sbjct: 418 DRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYG 477
Query: 63 -DRAGYAN--GSGYGSPNSAFGAQAGQYTYGQGTYGA--AAYG----TSSYTAQEYGAGT 113
DR GY G GYG +G G Y +G YG YG Y G
Sbjct: 478 GDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSG 537
Query: 114 YGASSTTSTG 123
YG + G
Sbjct: 538 YGGDRSGGYG 547
Score = 32.0 bits (71), Expect = 0.30
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 4/106 (3%)
Query: 71 SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSS 130
S GS + G Q TYG G+ YG +S + YG T + +G SS S
Sbjct: 2 SDSGSYGQSGGEQQSYSTYGNP--GSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQS 59
Query: 131 QQFSGIGRSGQQPQPLMSQQFAQPPGATNM--IGYMGQTAYQYPPP 174
S G Q+ Q + NM G G A Y P
Sbjct: 60 YSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQP 105
Score = 31.2 bits (69), Expect = 0.52
Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 52 DSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQ-YT-YGQGT---YGAAAYGTSSY-- 104
DS SY +S ++ Y S YG+P S QA Q Y+ YGQ T YG G SSY
Sbjct: 3 DSGSY-GQSGGEQQSY---STYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQ 58
Query: 105 -TAQEYGA------GTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQ 150
+Q YG +Y + G+ S G GR+ QP QQ
Sbjct: 59 SYSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSGSQG-GRAPSYDQPDYGQQ 110
>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
Length = 592
Score = 39.7 bits (91), Expect = 0.001
Identities = 31/131 (23%), Positives = 40/131 (30%), Gaps = 24/131 (18%)
Query: 7 RGGGGGGGKGGRSRYR-------------------TTSSANNPNLMYQDECDRRLRGVKD 47
RGGG GGG+ GR YR S N N ++ C++ +
Sbjct: 326 RGGGSGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPE 385
Query: 48 GGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
R +R R GY G G +G G YG Y+
Sbjct: 386 DSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDR-----SGGGYGGDRSSGGGYSGD 440
Query: 108 EYGAGTYGASS 118
G G G S
Sbjct: 441 RSGGGYGGDRS 451
Score = 35.4 bits (80), Expect = 0.028
Identities = 36/130 (27%), Positives = 40/130 (30%), Gaps = 11/130 (8%)
Query: 5 DHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSET-- 62
D GGG GG + Y S RG GG R DR
Sbjct: 421 DRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYG 480
Query: 63 -DRAGYAN--GSGYGSPNSAFGAQAGQYTYGQGTYGA--AAYG----TSSYTAQEYGAGT 113
DR GY G GYG +G G Y +G YG YG Y G
Sbjct: 481 GDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSG 540
Query: 114 YGASSTTSTG 123
YG + G
Sbjct: 541 YGGDRSGGYG 550
Score = 32.7 bits (73), Expect = 0.18
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Query: 52 DSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGA 111
DS SY +S ++ Y S YG+P S QA Q G G ++YG + YG
Sbjct: 3 DSGSY-GQSGGEQQSY---STYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQ 58
Query: 112 GTYGASSTTSTGRSSQSSSQQFSGIGRSGQQ 142
G S + + + SS GQQ
Sbjct: 59 SQSGYSQSYGGYENQKQSSYSQQPYNNQGQQ 89
Score = 30.8 bits (68), Expect = 0.68
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 9/89 (10%)
Query: 62 TDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTS 121
+D Y G S +G G YGQ + + YG + T YG G S S
Sbjct: 2 SDSGSYGQSGGEQQSYSTYG-NPGSQGYGQASQSYSGYGQT--TDSSYGQNYSGYS---S 55
Query: 122 TGRSSQSSSQQFSGIGRSGQQPQPLMSQQ 150
G+S SQ + G Q Q SQQ
Sbjct: 56 YGQSQSGYSQSYGGY---ENQKQSSYSQQ 81
>gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo
sapiens]
Length = 354
Score = 39.3 bits (90), Expect = 0.002
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 53/157 (33%)
Query: 72 GYGSPNSAFGAQAGQYTYGQ------------GTYGAAAYGTS----------------- 102
GY A+G Q+ TYGQ TYG AY TS
Sbjct: 28 GYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAY 86
Query: 103 SYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRS------GQQP---QPLMSQ---- 149
S Q YG G Y +TT+T ++Q+S S G GQQP P Q
Sbjct: 87 SQPVQGYGTGAY--DTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNK 144
Query: 150 --QFAQPPGATN-----MIGYMGQTAYQYPPPPPPPP 179
+ +QP +T +GY GQ+ Y YP P P
Sbjct: 145 PTETSQPQSSTGGYNQPSLGY-GQSNYSYPQVPGSYP 180
Score = 28.5 bits (62), Expect = 3.4
Identities = 33/135 (24%), Positives = 45/135 (33%), Gaps = 33/135 (24%)
Query: 46 KDGGRRDSASYRDRSETDRAGYANGS-GYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSY 104
+DG + S + ++ GY S GYG N ++ G Y Q +Y +SY
Sbjct: 140 QDGNKPTETS---QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPM-QPVTAPPSYPPTSY 195
Query: 105 TAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYM 164
SST T S SQQ + QP Y
Sbjct: 196 ------------SSTQPTSYDQSSYSQQ----------------NTYGQPSSYGQQSSYG 227
Query: 165 GQTAYQYPPPPPPPP 179
Q++Y PP PP
Sbjct: 228 QQSSYGQQPPTSYPP 242
>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
sapiens]
Length = 655
Score = 39.3 bits (90), Expect = 0.002
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 53/157 (33%)
Query: 72 GYGSPNSAFGAQAGQYTYGQ------------GTYGAAAYGTS----------------- 102
GY A+G Q+ TYGQ TYG AY TS
Sbjct: 28 GYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAY 86
Query: 103 SYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRS------GQQP---QPLMSQ---- 149
S Q YG G Y +TT+T ++Q+S S G GQQP P Q
Sbjct: 87 SQPVQGYGTGAY--DTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNK 144
Query: 150 --QFAQPPGATN-----MIGYMGQTAYQYPPPPPPPP 179
+ +QP +T +GY GQ+ Y YP P P
Sbjct: 145 PTETSQPQSSTGGYNQPSLGY-GQSNYSYPQVPGSYP 180
Score = 28.5 bits (62), Expect = 3.4
Identities = 33/135 (24%), Positives = 45/135 (33%), Gaps = 33/135 (24%)
Query: 46 KDGGRRDSASYRDRSETDRAGYANGS-GYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSY 104
+DG + S + ++ GY S GYG N ++ G Y Q +Y +SY
Sbjct: 140 QDGNKPTETS---QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPM-QPVTAPPSYPPTSY 195
Query: 105 TAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYM 164
SST T S SQQ + QP Y
Sbjct: 196 ------------SSTQPTSYDQSSYSQQ----------------NTYGQPSSYGQQSSYG 227
Query: 165 GQTAYQYPPPPPPPP 179
Q++Y PP PP
Sbjct: 228 QQSSYGQQPPTSYPP 242
>gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo
sapiens]
Length = 656
Score = 39.3 bits (90), Expect = 0.002
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 53/157 (33%)
Query: 72 GYGSPNSAFGAQAGQYTYGQ------------GTYGAAAYGTS----------------- 102
GY A+G Q+ TYGQ TYG AY TS
Sbjct: 28 GYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAY 86
Query: 103 SYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRS------GQQP---QPLMSQ---- 149
S Q YG G Y +TT+T ++Q+S S G GQQP P Q
Sbjct: 87 SQPVQGYGTGAY--DTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNK 144
Query: 150 --QFAQPPGATN-----MIGYMGQTAYQYPPPPPPPP 179
+ +QP +T +GY GQ+ Y YP P P
Sbjct: 145 PTETSQPQSSTGGYNQPSLGY-GQSNYSYPQVPGSYP 180
Score = 28.5 bits (62), Expect = 3.4
Identities = 33/135 (24%), Positives = 45/135 (33%), Gaps = 33/135 (24%)
Query: 46 KDGGRRDSASYRDRSETDRAGYANGS-GYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSY 104
+DG + S + ++ GY S GYG N ++ G Y Q +Y +SY
Sbjct: 140 QDGNKPTETS---QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPM-QPVTAPPSYPPTSY 195
Query: 105 TAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYM 164
SST T S SQQ + QP Y
Sbjct: 196 ------------SSTQPTSYDQSSYSQQ----------------NTYGQPSSYGQQSSYG 227
Query: 165 GQTAYQYPPPPPPPP 179
Q++Y PP PP
Sbjct: 228 QQSSYGQQPPTSYPP 242
>gi|212549553 interleukin enhancer binding factor 3 isoform d [Homo
sapiens]
Length = 898
Score = 39.3 bits (90), Expect = 0.002
Identities = 48/172 (27%), Positives = 64/172 (37%), Gaps = 32/172 (18%)
Query: 9 GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKD---GGRRDSASYRDRSETDRA 65
GGGGGG GG S Y + +N Y + G K G ++ S +S +
Sbjct: 705 GGGGGGGGGSSGYGSYYQGDN----YNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQ 760
Query: 66 GYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGT---------YGA 116
N S Y + G Q G Y +GQG+Y ++SY + G G+ Y
Sbjct: 761 QSYNQSPYSNYGPPQGKQKG-YNHGQGSYSY----SNSYNSPGGGGGSDYNYESKFNYSG 815
Query: 117 SSTTSTGRSSQSSSQQF-----------SGIGRSGQQPQPLMSQQFAQPPGA 157
S S G S S + SG G S Q Q SQ PG+
Sbjct: 816 SGGRSGGNSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGYSQSNYNSPGS 867
Score = 35.4 bits (80), Expect = 0.028
Identities = 45/184 (24%), Positives = 62/184 (33%), Gaps = 55/184 (29%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNP--------------------NLMYQDECDRRL----- 42
GGGGGGG G Y + N+P YQ ++
Sbjct: 707 GGGGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQS 766
Query: 43 --------RGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPN----SAFGAQAGQYTYG 90
+G + G SY + + G GS Y + S G ++G +YG
Sbjct: 767 PYSNYGPPQGKQKGYNHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYG 826
Query: 91 QGT----------YGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSG 140
G YG + G SSY ++ G Y S+ S G S Q +SG S
Sbjct: 827 SGGASYNPGSHGGYGGGSGGGSSYQGKQ---GGYSQSNYNSPG-----SGQNYSGPPSSY 878
Query: 141 QQPQ 144
Q Q
Sbjct: 879 QSSQ 882
Score = 30.8 bits (68), Expect = 0.68
Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 12/136 (8%)
Query: 7 RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRD-RSETDRA 65
RG G GG GR R R AN+ M GG +A Y S +
Sbjct: 644 RGRGRGGSIRGRGRGRGFGGANHGGYM---NAGAGYGSYGYGGNSATAGYSQFYSNGGHS 700
Query: 66 GYANGSGYGSPNSAFGAQAGQYTYGQG-TYGAAAYGTSSYTAQEYGA---GTYGASSTTS 121
G A+G G G G +G +Y QG Y + + Q +G +YG+ +
Sbjct: 701 GNASGGGGGGG----GGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSH 756
Query: 122 TGRSSQSSSQQFSGIG 137
G+ + +S G
Sbjct: 757 QGQQQSYNQSPYSNYG 772
Score = 29.6 bits (65), Expect = 1.5
Identities = 35/130 (26%), Positives = 44/130 (33%), Gaps = 18/130 (13%)
Query: 66 GYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTA---QEYGAGTYGASSTTST 122
G G G+G GA G Y YG+ YG +S TA Q Y G + +++
Sbjct: 654 GRGRGRGFG------GANHGGYMNAGAGYGSYGYGGNSATAGYSQFYSNGGHSGNASGGG 707
Query: 123 GRSSQSSSQQFSGI-GRSGQQPQPLMSQQFAQPPGATNMIGYMG--------QTAYQYPP 173
G SS S G + P P QP G Y Q +Y P
Sbjct: 708 GGGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQSP 767
Query: 174 PPPPPPPSRK 183
PP K
Sbjct: 768 YSNYGPPQGK 777
>gi|24234750 interleukin enhancer binding factor 3 isoform a [Homo
sapiens]
Length = 894
Score = 39.3 bits (90), Expect = 0.002
Identities = 48/172 (27%), Positives = 64/172 (37%), Gaps = 32/172 (18%)
Query: 9 GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKD---GGRRDSASYRDRSETDRA 65
GGGGGG GG S Y + +N Y + G K G ++ S +S +
Sbjct: 701 GGGGGGGGGSSGYGSYYQGDN----YNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQ 756
Query: 66 GYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGT---------YGA 116
N S Y + G Q G Y +GQG+Y ++SY + G G+ Y
Sbjct: 757 QSYNQSPYSNYGPPQGKQKG-YNHGQGSYSY----SNSYNSPGGGGGSDYNYESKFNYSG 811
Query: 117 SSTTSTGRSSQSSSQQF-----------SGIGRSGQQPQPLMSQQFAQPPGA 157
S S G S S + SG G S Q Q SQ PG+
Sbjct: 812 SGGRSGGNSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGYSQSNYNSPGS 863
Score = 35.4 bits (80), Expect = 0.028
Identities = 45/184 (24%), Positives = 62/184 (33%), Gaps = 55/184 (29%)
Query: 8 GGGGGGGKGGRSRYRTTSSANNP--------------------NLMYQDECDRRL----- 42
GGGGGGG G Y + N+P YQ ++
Sbjct: 703 GGGGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQS 762
Query: 43 --------RGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPN----SAFGAQAGQYTYG 90
+G + G SY + + G GS Y + S G ++G +YG
Sbjct: 763 PYSNYGPPQGKQKGYNHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYG 822
Query: 91 QGT----------YGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSG 140
G YG + G SSY ++ G Y S+ S G S Q +SG S
Sbjct: 823 SGGASYNPGSHGGYGGGSGGGSSYQGKQ---GGYSQSNYNSPG-----SGQNYSGPPSSY 874
Query: 141 QQPQ 144
Q Q
Sbjct: 875 QSSQ 878
Score = 30.8 bits (68), Expect = 0.68
Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 12/136 (8%)
Query: 7 RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRD-RSETDRA 65
RG G GG GR R R AN+ M GG +A Y S +
Sbjct: 640 RGRGRGGSIRGRGRGRGFGGANHGGYM---NAGAGYGSYGYGGNSATAGYSQFYSNGGHS 696
Query: 66 GYANGSGYGSPNSAFGAQAGQYTYGQG-TYGAAAYGTSSYTAQEYGA---GTYGASSTTS 121
G A+G G G G +G +Y QG Y + + Q +G +YG+ +
Sbjct: 697 GNASGGGGGGG----GGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSH 752
Query: 122 TGRSSQSSSQQFSGIG 137
G+ + +S G
Sbjct: 753 QGQQQSYNQSPYSNYG 768
Score = 29.6 bits (65), Expect = 1.5
Identities = 35/130 (26%), Positives = 44/130 (33%), Gaps = 18/130 (13%)
Query: 66 GYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTA---QEYGAGTYGASSTTST 122
G G G+G GA G Y YG+ YG +S TA Q Y G + +++
Sbjct: 650 GRGRGRGFG------GANHGGYMNAGAGYGSYGYGGNSATAGYSQFYSNGGHSGNASGGG 703
Query: 123 GRSSQSSSQQFSGI-GRSGQQPQPLMSQQFAQPPGATNMIGYMG--------QTAYQYPP 173
G SS S G + P P QP G Y Q +Y P
Sbjct: 704 GGGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQSP 763
Query: 174 PPPPPPPSRK 183
PP K
Sbjct: 764 YSNYGPPQGK 773
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.128 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,823,423
Number of Sequences: 37866
Number of extensions: 590272
Number of successful extensions: 13149
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 361
Number of HSP's that attempted gapping in prelim test: 6791
Number of HSP's gapped (non-prelim): 4172
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.