Guide to the Human Genome
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Name: ANKRD34A Sequence: fasta or formatted (496aa) NCBI GI: 89941470
Description:

ankyrin repeat domain 34

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         44           2
 C cysteine            1.0          5           1
 D aspartate           4.0         20           2
 E glutamate           6.5         32           4
 F phenylalanine       1.2          6           1
 G glycine            10.7         53           4
 H histidine           2.4         12           1
 I isoleucine          2.0         10           3
 K lysine              3.0         15           2
 L leucine            11.3         56           3
 M methionine          1.4          7           1
 N asparagine          1.6          8           1
 P proline            14.3         71           3
 Q glutamine           3.6         18           1
 R arginine            9.5         47           3
 S serine              8.5         42           2
 T threonine           5.2         26           2
 V valine              3.2         16           1
 W tryptophan          0.4          2           1
 Y tyrosine            1.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 34 
ANKRD34C              0.323   ankyrin repeat domain 34C 
ANKRD34C              0.323   PREDICTED: ankyrin repeat domain 34C 
ANKRD34C              0.323   PREDICTED: ankyrin repeat domain 34C 
ANKRD34C              0.323   PREDICTED: ankyrin repeat domain 34C 
ANKRD34B              0.244   ankyrin repeat domain 34B 
LOC100131244          0.050   PREDICTED: similar to kinase D-interacting substrat...
LOC100131244          0.050   PREDICTED: similar to kinase D-interacting substrat...
LOC100131244          0.050   PREDICTED: similar to kinase D-interacting substrat...
TANC2                 0.046   tetratricopeptide repeat, ankyrin repeat and coiled...
LOC441869             0.043   hypothetical protein LOC441869 
TANC1                 0.042   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.042   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKRD24               0.041   ankyrin repeat domain 24 
PRG4                  0.039   proteoglycan 4 isoform D 
PRG4                  0.039   proteoglycan 4 isoform C 
PRG4                  0.039   proteoglycan 4 isoform B 
PRG4                  0.039   proteoglycan 4 isoform A 
ASB18                 0.039   ankyrin repeat and SOCS box-containing 18 
ANKRD17               0.038   ankyrin repeat domain protein 17 isoform b 
WIPF1                 0.038   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.038   WAS/WASL interacting protein family, member 1 
MLL2                  0.038   myeloid/lymphoid or mixed-lineage leukemia 2 
ANKHD1                0.037   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.037   ANKHD1-EIF4EBP3 protein 
ANKRD17               0.037   ankyrin repeat domain protein 17 isoform a 
ANKRD50               0.036   ankyrin repeat domain 50 
ASZ1                  0.035   ankyrin repeat, SAM and basic leucine zipper domain ...
FEM1B                 0.035   fem-1 homolog b 
NACA                  0.033   nascent polypeptide-associated complex alpha subuni...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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