PSMA8 34802

Name: PSMA8	Sequence: fasta or formatted (212aa)		NCBI GI: 68303565
Description: proteasome alpha 8 subunit isoform 3		Referenced in: Proteasome
Other entries for this name: alt prot [256aa] proteasome alpha 8 subunit isoform 1 alt prot [250aa] proteasome alpha 8 subunit isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 22 1 C cysteine 0.5 1 1 D aspartate 4.7 10 3 E glutamate 9.0 19 2 F phenylalanine 3.3 7 1 G glycine 5.7 12 2 H histidine 1.4 3 1 I isoleucine 7.5 16 2 K lysine 9.4 20 3 L leucine 6.1 13 2 M methionine 0.9 2 1 N asparagine 2.8 6 1 P proline 2.4 5 1 Q glutamine 3.8 8 1 R arginine 6.6 14 2 S serine 7.1 15 1 T threonine 6.1 13 1 V valine 8.0 17 2 W tryptophan 0.5 1 1 Y tyrosine 3.8 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome alpha 8 subunit isoform 3 PSMA8 0.951 proteasome alpha 8 subunit isoform 2 PSMA8 0.946 proteasome alpha 8 subunit isoform 1 PSMA7 0.790 proteasome alpha 7 subunit PSMA4 0.290 proteasome alpha 4 subunit isoform 1 PSMA4 0.290 proteasome alpha 4 subunit isoform 1 PSMA5 0.246 proteasome alpha 5 subunit PSMA4 0.236 proteasome alpha 4 subunit isoform 2 PSMA2 0.231 proteasome subunit alpha type 2 PSMA1 0.228 proteasome alpha 1 subunit isoform 2 PSMA1 0.228 proteasome alpha 1 subunit isoform 1 PSMA6 0.174 proteasome alpha 6 subunit PSMA3 0.145 proteasome alpha 3 subunit isoform 1 PSMA3 0.135 proteasome alpha 3 subunit isoform 2 PSMA1 0.083 proteasome alpha 1 subunit isoform 3 LOC121906 0.047 PREDICTED: similar to hCG30646 LOC121906 0.047 PREDICTED: similar to hCG30646 LOC121906 0.047 PREDICTED: similar to hCG30646 CCDC91 0.023 GGA binding partner PSMB10 0.021 proteasome beta 10 subunit proprotein PSMB1 0.018 proteasome beta 1 subunit PSMB9 0.010 proteasome beta 9 subunit isoform 2 proprotein [Homo... PSMB9 0.010 proteasome beta 9 subunit isoform 1 proprotein INCENP 0.010 inner centromere protein antigens 135/155kDa isofor... GCC2 0.010 GRIP and coiled-coil domain-containing 2 ANXA6 0.010 annexin VI isoform 2 ANXA6 0.010 annexin VI isoform 1 CEP290 0.008 centrosomal protein 290kDa RANGAP1 0.008 Ran GTPase activating protein 1 DLG5 0.008 discs large homolog 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.