PSMA8 34800

Name: PSMA8	Sequence: fasta or formatted (256aa)		NCBI GI: 68303561
Description: proteasome alpha 8 subunit isoform 1		Referenced in: Proteasome
Other entries for this name: alt prot [250aa] proteasome alpha 8 subunit isoform 2 alt prot [212aa] proteasome alpha 8 subunit isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 26 1 C cysteine 1.2 3 1 D aspartate 5.1 13 3 E glutamate 8.2 21 2 F phenylalanine 3.5 9 1 G glycine 5.5 14 2 H histidine 1.6 4 1 I isoleucine 7.8 20 2 K lysine 9.4 24 3 L leucine 6.6 17 2 M methionine 1.2 3 1 N asparagine 2.7 7 1 P proline 2.0 5 1 Q glutamine 3.5 9 1 R arginine 6.2 16 2 S serine 6.2 16 1 T threonine 6.2 16 1 V valine 9.4 24 2 W tryptophan 0.4 1 1 Y tyrosine 3.1 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome alpha 8 subunit isoform 1 PSMA8 0.964 proteasome alpha 8 subunit isoform 2 PSMA7 0.815 proteasome alpha 7 subunit PSMA8 0.775 proteasome alpha 8 subunit isoform 3 PSMA4 0.291 proteasome alpha 4 subunit isoform 1 PSMA4 0.291 proteasome alpha 4 subunit isoform 1 PSMA2 0.270 proteasome subunit alpha type 2 PSMA5 0.268 proteasome alpha 5 subunit PSMA1 0.231 proteasome alpha 1 subunit isoform 2 PSMA1 0.231 proteasome alpha 1 subunit isoform 1 PSMA6 0.200 proteasome alpha 6 subunit PSMA3 0.191 proteasome alpha 3 subunit isoform 1 PSMA4 0.189 proteasome alpha 4 subunit isoform 2 PSMA3 0.183 proteasome alpha 3 subunit isoform 2 PSMA1 0.108 proteasome alpha 1 subunit isoform 3 LOC121906 0.042 PREDICTED: similar to hCG30646 LOC121906 0.042 PREDICTED: similar to hCG30646 LOC121906 0.042 PREDICTED: similar to hCG30646 PSMB10 0.028 proteasome beta 10 subunit proprotein PSMB9 0.019 proteasome beta 9 subunit isoform 2 proprotein [Homo... PSMB9 0.019 proteasome beta 9 subunit isoform 1 proprotein CCDC91 0.019 GGA binding partner PSMB1 0.008 proteasome beta 1 subunit INCENP 0.008 inner centromere protein antigens 135/155kDa isofor... GCC2 0.008 GRIP and coiled-coil domain-containing 2 CEP290 0.006 centrosomal protein 290kDa RANGAP1 0.006 Ran GTPase activating protein 1 PARD3 0.006 partitioning-defective protein 3 homolog KIF20B 0.006 M-phase phosphoprotein 1 DDX60L 0.006 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.