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Search of human proteins with 66528642
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|66528642 nuclear receptor subfamily 3, group C, member 1
isoform beta [Homo sapiens]
(742 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|66528642 nuclear receptor subfamily 3, group C, member 1 isof... 1495 0.0
gi|66528611 nuclear receptor subfamily 3, group C, member 1 isof... 1464 0.0
gi|66528586 nuclear receptor subfamily 3, group C, member 1 isof... 1464 0.0
gi|66528563 nuclear receptor subfamily 3, group C, member 1 isof... 1464 0.0
gi|66528530 nuclear receptor subfamily 3, group C, member 1 isof... 1464 0.0
gi|4504133 nuclear receptor subfamily 3, group C, member 1 isofo... 1464 0.0
gi|66528677 nuclear receptor subfamily 3, group C, member 1 isof... 1460 0.0
gi|158508572 nuclear receptor subfamily 3, group C, member 2 [Ho... 420 e-117
gi|110611914 progesterone receptor [Homo sapiens] 382 e-106
gi|58535455 androgen receptor isoform 2 [Homo sapiens] 354 2e-97
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 354 2e-97
gi|45545429 estrogen-related receptor gamma isoform 2 [Homo sapi... 180 4e-45
gi|45545427 estrogen-related receptor gamma isoform 2 [Homo sapi... 180 4e-45
gi|45545433 estrogen-related receptor gamma isoform 1 [Homo sapi... 180 4e-45
gi|197209821 estrogen-related receptor gamma isoform 2 [Homo sap... 180 4e-45
gi|238550159 estrogen-related receptor beta [Homo sapiens] 173 6e-43
gi|18860920 estrogen-related receptor alpha [Homo sapiens] 167 2e-41
gi|170295804 estrogen receptor alpha isoform 4 [Homo sapiens] 164 2e-40
gi|170295802 estrogen receptor alpha isoform 3 [Homo sapiens] 164 2e-40
gi|170295800 estrogen receptor alpha isoform 2 [Homo sapiens] 164 2e-40
gi|62821794 estrogen receptor alpha isoform 1 [Homo sapiens] 164 2e-40
gi|94538328 estrogen receptor beta isoform 2 [Homo sapiens] 161 2e-39
gi|94538325 estrogen receptor beta isoform 2 [Homo sapiens] 161 2e-39
gi|10835013 estrogen receptor beta isoform 1 [Homo sapiens] 160 5e-39
gi|5453822 nuclear receptor subfamily 4, group A, member 2 [Homo... 120 6e-27
gi|20070199 nuclear receptor subfamily 2, group F, member 6 [Hom... 119 1e-26
gi|27894344 nuclear receptor subfamily 4, group A, member 1 [Hom... 117 3e-26
gi|21361342 nuclear receptor subfamily 4, group A, member 1 [Hom... 117 3e-26
gi|4506755 retinoid X receptor, alpha [Homo sapiens] 116 7e-26
gi|11415052 retinoid X receptor, beta [Homo sapiens] 115 2e-25
>gi|66528642 nuclear receptor subfamily 3, group C, member 1 isoform
beta [Homo sapiens]
Length = 742
Score = 1495 bits (3871), Expect = 0.0
Identities = 742/742 (100%), Positives = 742/742 (100%)
Query: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
Query: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
Query: 721 LLDSMHENVMWLKPESTSHTLI 742
LLDSMHENVMWLKPESTSHTLI
Sbjct: 721 LLDSMHENVMWLKPESTSHTLI 742
>gi|66528611 nuclear receptor subfamily 3, group C, member 1 isoform
alpha [Homo sapiens]
Length = 777
Score = 1464 bits (3791), Expect = 0.0
Identities = 728/729 (99%), Positives = 728/729 (99%)
Query: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
Query: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
Query: 721 LLDSMHENV 729
LLDSMHE V
Sbjct: 721 LLDSMHEVV 729
>gi|66528586 nuclear receptor subfamily 3, group C, member 1 isoform
alpha [Homo sapiens]
Length = 777
Score = 1464 bits (3791), Expect = 0.0
Identities = 728/729 (99%), Positives = 728/729 (99%)
Query: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
Query: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
Query: 721 LLDSMHENV 729
LLDSMHE V
Sbjct: 721 LLDSMHEVV 729
>gi|66528563 nuclear receptor subfamily 3, group C, member 1 isoform
alpha [Homo sapiens]
Length = 777
Score = 1464 bits (3791), Expect = 0.0
Identities = 728/729 (99%), Positives = 728/729 (99%)
Query: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
Query: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
Query: 721 LLDSMHENV 729
LLDSMHE V
Sbjct: 721 LLDSMHEVV 729
>gi|66528530 nuclear receptor subfamily 3, group C, member 1 isoform
alpha [Homo sapiens]
Length = 777
Score = 1464 bits (3791), Expect = 0.0
Identities = 728/729 (99%), Positives = 728/729 (99%)
Query: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
Query: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
Query: 721 LLDSMHENV 729
LLDSMHE V
Sbjct: 721 LLDSMHEVV 729
>gi|4504133 nuclear receptor subfamily 3, group C, member 1 isoform
alpha [Homo sapiens]
Length = 777
Score = 1464 bits (3791), Expect = 0.0
Identities = 728/729 (99%), Positives = 728/729 (99%)
Query: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
Query: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
Query: 721 LLDSMHENV 729
LLDSMHE V
Sbjct: 721 LLDSMHEVV 729
>gi|66528677 nuclear receptor subfamily 3, group C, member 1 isoform
gamma [Homo sapiens]
Length = 778
Score = 1460 bits (3779), Expect = 0.0
Identities = 728/730 (99%), Positives = 728/730 (99%), Gaps = 1/730 (0%)
Query: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1 MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
Query: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61 LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEG-QHNYLCAGRNDCIIDKIRRKNCPACRYR 479
CLVCSDEASGCHYGVLTCGSCKVFFKRAVEG QHNYLCAGRNDCIIDKIRRKNCPACRYR
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGRQHNYLCAGRNDCIIDKIRRKNCPACRYR 480
Query: 480 KCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVI 539
KCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVI
Sbjct: 481 KCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVI 540
Query: 540 EPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYS 599
EPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYS
Sbjct: 541 EPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYS 600
Query: 600 WMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVS 659
WMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVS
Sbjct: 601 WMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVS 660
Query: 660 YEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLT 719
YEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLT
Sbjct: 661 YEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLT 720
Query: 720 KLLDSMHENV 729
KLLDSMHE V
Sbjct: 721 KLLDSMHEVV 730
>gi|158508572 nuclear receptor subfamily 3, group C, member 2 [Homo
sapiens]
Length = 984
Score = 420 bits (1080), Expect = e-117
Identities = 231/469 (49%), Positives = 297/469 (63%), Gaps = 54/469 (11%)
Query: 290 GVIKQEKLGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMN---TASLSQQQD 346
G+ ++ G+ Y +AS P + I+G SGGQ +HY + T SLS+
Sbjct: 492 GIKQEPDDGSYYPEASIPSSAIVG-----------VNSGGQSFHYRIGAQGTISLSRSAR 540
Query: 347 QKPIFNV--IPPIPVGSENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSS 404
+ ++ PP+ E+W + GD L+S + +P SS ++R
Sbjct: 541 DQSFQHLSSFPPVNTLVESW---KSHGD--LSSRRSDGYPVLEYIPENVSSSTLR----- 590
Query: 405 PPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCI 464
S + + P K+CLVC DEASGCHYGV+TCGSCKVFFKRAVEGQHNYLCAGRNDCI
Sbjct: 591 ----SVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYLCAGRNDCI 646
Query: 465 IDKIRRKNCPACRYRKCLQAGMNLEARKTKK--KIKGIQQATTGVSQETSENP------- 515
IDKIRRKNCPACR +KCLQAGMNL ARK+KK K+KGI + Q P
Sbjct: 647 IDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGIHEEQPQQQQPPPPPPPPQSPEE 706
Query: 516 GNKTIVPATLPQ---------------LTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIM 560
G I PA P LTP+ V +LE IEPE++YAGYDSS PD+ ++
Sbjct: 707 GTTYIAPAKEPSVNTALVPQLSTISRALTPSPVMVLENIEPEIVYAGYDSSKPDTAENLL 766
Query: 561 TTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANL 620
+TLN L G+Q+I VKWAK +PGF+NL L+DQ+TL+QYSWM L +FAL WRSY+ +++
Sbjct: 767 STLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQF 826
Query: 621 LCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGL 680
L FAPDL+ NE++M MY+ C+ M +S + RLQ+++EEY MK LLLLS++PKDGL
Sbjct: 827 LYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFEEYTIMKVLLLLSTIPKDGL 886
Query: 681 KSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHENV 729
KSQ F+E+R YIKEL K + K NS Q+WQRFYQLTKLLDSMH+ V
Sbjct: 887 KSQAAFEEMRTNYIKELRKMVTKCPNNSGQSWQRFYQLTKLLDSMHDLV 935
>gi|110611914 progesterone receptor [Homo sapiens]
Length = 933
Score = 382 bits (981), Expect = e-106
Identities = 192/344 (55%), Positives = 244/344 (70%), Gaps = 10/344 (2%)
Query: 398 MRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLC 457
+RPD S S + P K+CL+C DEASGCHYGVLTCGSCKVFFKRA+EGQHNYLC
Sbjct: 545 LRPD-SEASQSPQYSFESLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLC 603
Query: 458 AGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKK--KIKGIQQATT-------GVS 508
AGRNDCI+DKIRRKNCPACR RKC QAGM L RK KK K++ ++ GV
Sbjct: 604 AGRNDCIVDKIRRKNCPACRLRKCCQAGMVLGGRKFKKFNKVRVVRALDAVALPQPVGVP 663
Query: 509 QETSENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGG 568
E+ T P QL P L++LL IEP+V+YAG+D++ PD++ ++T+LN LG
Sbjct: 664 NESQALSQRFTFSPGQDIQLIPPLINLLMSIEPDVIYAGHDNTKPDTSSSLLTSLNQLGE 723
Query: 569 RQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLI 628
RQ+++ VKW+K++PGFRNLH+DDQ+TL+QYSWM LM F LGWRSY+ S +L FAPDLI
Sbjct: 724 RQLLSVVKWSKSLPGFRNLHIDDQITLIQYSWMSLMVFGLGWRSYKHVSGQMLYFAPDLI 783
Query: 629 INEQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDE 688
+NEQRM Y C M + E +LQVS EE+LCMK LLLL+++P +GL+SQ F+E
Sbjct: 784 LNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEFLCMKVLLLLNTIPLEGLRSQTQFEE 843
Query: 689 IRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHENVMWL 732
+R +YI+EL KAI R+ + QRFYQLTKLLD++H+ V L
Sbjct: 844 MRSSYIRELIKAIGLRQKGVVSSSQRFYQLTKLLDNLHDLVKQL 887
>gi|58535455 androgen receptor isoform 2 [Homo sapiens]
Length = 388
Score = 354 bits (908), Expect = 2e-97
Identities = 173/316 (54%), Positives = 224/316 (70%), Gaps = 9/316 (2%)
Query: 416 PPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPA 475
PP K CL+C DEASGCHYG LTCGSCKVFFKRA EG+ YLCA RNDC IDK RRKNCP+
Sbjct: 23 PPQKTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPS 82
Query: 476 CRYRKCLQAGMNLEARKTKK------KIKGIQQATTGVSQETSENPGNKTIVPATLPQLT 529
CR RKC +AGM L ARK KK + +G +TT ++ET++ T+ +
Sbjct: 83 CRLRKCYEAGMTLGARKLKKLGNLKLQEEGEASSTTSPTEETTQK---LTVSHIEGYECQ 139
Query: 530 PTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 589
P +++LE IEP V+ AG+D++ PDS ++++LN LG RQ++ VKWAKA+PGFRNLH+
Sbjct: 140 PIFLNVLEAIEPGVVCAGHDNNQPDSFAALLSSLNELGERQLVHVVKWAKALPGFRNLHV 199
Query: 590 DDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYV 649
DDQM ++QYSWM LM FA+GWRS+ ++ +L FAPDL+ NE RM MY QC M ++
Sbjct: 200 DDQMAVIQYSWMGLMVFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHL 259
Query: 650 SSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSS 709
S E LQ++ +E+LCMK LLL S +P DGLK+Q+ FDE+RM YIKEL + I + N +
Sbjct: 260 SQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIACKRKNPT 319
Query: 710 QNWQRFYQLTKLLDSM 725
+RFYQLTKLLDS+
Sbjct: 320 SCSRRFYQLTKLLDSV 335
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 354 bits (908), Expect = 2e-97
Identities = 173/316 (54%), Positives = 224/316 (70%), Gaps = 9/316 (2%)
Query: 416 PPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPA 475
PP K CL+C DEASGCHYG LTCGSCKVFFKRA EG+ YLCA RNDC IDK RRKNCP+
Sbjct: 555 PPQKTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPS 614
Query: 476 CRYRKCLQAGMNLEARKTKK------KIKGIQQATTGVSQETSENPGNKTIVPATLPQLT 529
CR RKC +AGM L ARK KK + +G +TT ++ET++ T+ +
Sbjct: 615 CRLRKCYEAGMTLGARKLKKLGNLKLQEEGEASSTTSPTEETTQK---LTVSHIEGYECQ 671
Query: 530 PTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 589
P +++LE IEP V+ AG+D++ PDS ++++LN LG RQ++ VKWAKA+PGFRNLH+
Sbjct: 672 PIFLNVLEAIEPGVVCAGHDNNQPDSFAALLSSLNELGERQLVHVVKWAKALPGFRNLHV 731
Query: 590 DDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYV 649
DDQM ++QYSWM LM FA+GWRS+ ++ +L FAPDL+ NE RM MY QC M ++
Sbjct: 732 DDQMAVIQYSWMGLMVFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHL 791
Query: 650 SSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSS 709
S E LQ++ +E+LCMK LLL S +P DGLK+Q+ FDE+RM YIKEL + I + N +
Sbjct: 792 SQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIACKRKNPT 851
Query: 710 QNWQRFYQLTKLLDSM 725
+RFYQLTKLLDS+
Sbjct: 852 SCSRRFYQLTKLLDSV 867
>gi|45545429 estrogen-related receptor gamma isoform 2 [Homo
sapiens]
Length = 435
Score = 180 bits (457), Expect = 4e-45
Identities = 102/273 (37%), Positives = 150/273 (54%), Gaps = 4/273 (1%)
Query: 402 VSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRN 461
V P + P +LCLVC D ASG HYGV +C +CK FFKR ++G Y C N
Sbjct: 86 VEDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATN 145
Query: 462 DCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIV 521
+C I K RRK+C ACR+ KCL+ GM E + + G Q+ + E S + +
Sbjct: 146 ECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQ 205
Query: 522 PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAI 581
PA P +VS L V EPE +YA D +VPDS + +TTL L R+++ + WAK I
Sbjct: 206 PAKKPY--NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHI 263
Query: 582 PGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYD 641
PGF L L DQM+LLQ +WM ++ + +RS S + L +A D I++E + L + D
Sbjct: 264 PGFSTLSLADQMSLLQSAWMEILILGVVYRSL--SFEDELVYADDYIMDEDQSKLAGLLD 321
Query: 642 QCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS 674
+L + + +++ EE++ +K + L +S
Sbjct: 322 LNNAILQLVKKYKSMKLEKEEFVTLKAIALANS 354
>gi|45545427 estrogen-related receptor gamma isoform 2 [Homo
sapiens]
Length = 435
Score = 180 bits (457), Expect = 4e-45
Identities = 102/273 (37%), Positives = 150/273 (54%), Gaps = 4/273 (1%)
Query: 402 VSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRN 461
V P + P +LCLVC D ASG HYGV +C +CK FFKR ++G Y C N
Sbjct: 86 VEDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATN 145
Query: 462 DCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIV 521
+C I K RRK+C ACR+ KCL+ GM E + + G Q+ + E S + +
Sbjct: 146 ECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQ 205
Query: 522 PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAI 581
PA P +VS L V EPE +YA D +VPDS + +TTL L R+++ + WAK I
Sbjct: 206 PAKKPY--NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHI 263
Query: 582 PGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYD 641
PGF L L DQM+LLQ +WM ++ + +RS S + L +A D I++E + L + D
Sbjct: 264 PGFSTLSLADQMSLLQSAWMEILILGVVYRSL--SFEDELVYADDYIMDEDQSKLAGLLD 321
Query: 642 QCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS 674
+L + + +++ EE++ +K + L +S
Sbjct: 322 LNNAILQLVKKYKSMKLEKEEFVTLKAIALANS 354
>gi|45545433 estrogen-related receptor gamma isoform 1 [Homo
sapiens]
Length = 458
Score = 180 bits (457), Expect = 4e-45
Identities = 102/273 (37%), Positives = 150/273 (54%), Gaps = 4/273 (1%)
Query: 402 VSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRN 461
V P + P +LCLVC D ASG HYGV +C +CK FFKR ++G Y C N
Sbjct: 109 VEDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATN 168
Query: 462 DCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIV 521
+C I K RRK+C ACR+ KCL+ GM E + + G Q+ + E S + +
Sbjct: 169 ECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQ 228
Query: 522 PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAI 581
PA P +VS L V EPE +YA D +VPDS + +TTL L R+++ + WAK I
Sbjct: 229 PAKKPY--NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHI 286
Query: 582 PGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYD 641
PGF L L DQM+LLQ +WM ++ + +RS S + L +A D I++E + L + D
Sbjct: 287 PGFSTLSLADQMSLLQSAWMEILILGVVYRSL--SFEDELVYADDYIMDEDQSKLAGLLD 344
Query: 642 QCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS 674
+L + + +++ EE++ +K + L +S
Sbjct: 345 LNNAILQLVKKYKSMKLEKEEFVTLKAIALANS 377
>gi|197209821 estrogen-related receptor gamma isoform 2 [Homo
sapiens]
Length = 435
Score = 180 bits (457), Expect = 4e-45
Identities = 102/273 (37%), Positives = 150/273 (54%), Gaps = 4/273 (1%)
Query: 402 VSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRN 461
V P + P +LCLVC D ASG HYGV +C +CK FFKR ++G Y C N
Sbjct: 86 VEDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATN 145
Query: 462 DCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIV 521
+C I K RRK+C ACR+ KCL+ GM E + + G Q+ + E S + +
Sbjct: 146 ECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQ 205
Query: 522 PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAI 581
PA P +VS L V EPE +YA D +VPDS + +TTL L R+++ + WAK I
Sbjct: 206 PAKKPY--NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHI 263
Query: 582 PGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYD 641
PGF L L DQM+LLQ +WM ++ + +RS S + L +A D I++E + L + D
Sbjct: 264 PGFSTLSLADQMSLLQSAWMEILILGVVYRSL--SFEDELVYADDYIMDEDQSKLAGLLD 321
Query: 642 QCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS 674
+L + + +++ EE++ +K + L +S
Sbjct: 322 LNNAILQLVKKYKSMKLEKEEFVTLKAIALANS 354
>gi|238550159 estrogen-related receptor beta [Homo sapiens]
Length = 508
Score = 173 bits (438), Expect = 6e-43
Identities = 97/258 (37%), Positives = 145/258 (56%), Gaps = 4/258 (1%)
Query: 417 PPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPAC 476
P +LCLVC D ASG HYGV +C +CK FFKR ++G Y C N+C I K RRK+C AC
Sbjct: 99 PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158
Query: 477 RYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLL 536
R+ KCL+ GM E + + G Q+ + E+S + PA P +VS L
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKP--LTKIVSYL 216
Query: 537 EVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLL 596
V EP+ LYA +P+ + +TTL L R+++ + WAK IPGF +L L DQM+LL
Sbjct: 217 LVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSLL 276
Query: 597 QYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRL 656
Q +WM ++ + +RS + L +A D I++E+ L + + + +L + +L
Sbjct: 277 QSAWMEILILGIVYRSLPYD--DKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKL 334
Query: 657 QVSYEEYLCMKTLLLLSS 674
+V EE++ +K L L +S
Sbjct: 335 KVEKEEFVTLKALALANS 352
>gi|18860920 estrogen-related receptor alpha [Homo sapiens]
Length = 423
Score = 167 bits (424), Expect = 2e-41
Identities = 100/265 (37%), Positives = 141/265 (53%), Gaps = 9/265 (3%)
Query: 417 PPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPAC 476
P +LCLVC D ASG HYGV +C +CK FFKR ++G Y C N+C I K RRK C AC
Sbjct: 75 PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134
Query: 477 RYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATL---PQLTP--- 530
R+ KCL+ GM E + + G Q+ + PG P + P+ T
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPV 194
Query: 531 -TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 589
LVS L V+EPE LYA D + PD + TL L R+++ + WAK+IPGF +L L
Sbjct: 195 NALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSL 254
Query: 590 DDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYV 649
DQM++LQ WM ++ + RS L FA DL+++E+ + + +L +
Sbjct: 255 SDQMSVLQSVWMEVLVLGVAQRSLPLQDE--LAFAEDLVLDEEGARAAGLGELGAALLQL 312
Query: 650 SSELHRLQVSYEEYLCMKTLLLLSS 674
L L++ EEY+ +K L L +S
Sbjct: 313 VRRLQALRLEREEYVLLKALALANS 337
>gi|170295804 estrogen receptor alpha isoform 4 [Homo sapiens]
Length = 595
Score = 164 bits (416), Expect = 2e-40
Identities = 111/351 (31%), Positives = 171/351 (48%), Gaps = 37/351 (10%)
Query: 403 SSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRND 462
S+ S + + C VC+D ASG HYGV +C CK FFKR+++G ++Y+C N
Sbjct: 167 STNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQ 226
Query: 463 CIIDKIRRKNCPACRYRKCLQAGMN----LEARKTKKKIKGIQQATTGVSQETSENPGNK 518
C IDK RRK+C ACR RKC + GM + R+ + +K +Q G + + G+
Sbjct: 227 CTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRGEVGSAGDM 286
Query: 519 TIV---------------PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTL 563
L +VS L EP +LY+ YD + P S +M L
Sbjct: 287 RAANLWPSPLMIKRSKKNSLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLL 346
Query: 564 NMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCF 623
L R+++ + WAK +PGF +L L DQ+ LL+ +W+ ++ L WRS L F
Sbjct: 347 TNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGK--LLF 404
Query: 624 APDLIIN-EQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS----VPKD 678
AP+L+++ Q + M + +L SS + + EE++C+K+++LL+S
Sbjct: 405 APNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSS 464
Query: 679 GLKSQE-------LFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLL 722
LKS E + D+I T I + KA + + Q QR QL +L
Sbjct: 465 TLKSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQ----QQHQRLAQLLLIL 511
>gi|170295802 estrogen receptor alpha isoform 3 [Homo sapiens]
Length = 595
Score = 164 bits (416), Expect = 2e-40
Identities = 111/351 (31%), Positives = 171/351 (48%), Gaps = 37/351 (10%)
Query: 403 SSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRND 462
S+ S + + C VC+D ASG HYGV +C CK FFKR+++G ++Y+C N
Sbjct: 167 STNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQ 226
Query: 463 CIIDKIRRKNCPACRYRKCLQAGMN----LEARKTKKKIKGIQQATTGVSQETSENPGNK 518
C IDK RRK+C ACR RKC + GM + R+ + +K +Q G + + G+
Sbjct: 227 CTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRGEVGSAGDM 286
Query: 519 TIV---------------PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTL 563
L +VS L EP +LY+ YD + P S +M L
Sbjct: 287 RAANLWPSPLMIKRSKKNSLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLL 346
Query: 564 NMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCF 623
L R+++ + WAK +PGF +L L DQ+ LL+ +W+ ++ L WRS L F
Sbjct: 347 TNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGK--LLF 404
Query: 624 APDLIIN-EQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS----VPKD 678
AP+L+++ Q + M + +L SS + + EE++C+K+++LL+S
Sbjct: 405 APNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSS 464
Query: 679 GLKSQE-------LFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLL 722
LKS E + D+I T I + KA + + Q QR QL +L
Sbjct: 465 TLKSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQ----QQHQRLAQLLLIL 511
>gi|170295800 estrogen receptor alpha isoform 2 [Homo sapiens]
Length = 595
Score = 164 bits (416), Expect = 2e-40
Identities = 111/351 (31%), Positives = 171/351 (48%), Gaps = 37/351 (10%)
Query: 403 SSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRND 462
S+ S + + C VC+D ASG HYGV +C CK FFKR+++G ++Y+C N
Sbjct: 167 STNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQ 226
Query: 463 CIIDKIRRKNCPACRYRKCLQAGMN----LEARKTKKKIKGIQQATTGVSQETSENPGNK 518
C IDK RRK+C ACR RKC + GM + R+ + +K +Q G + + G+
Sbjct: 227 CTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRGEVGSAGDM 286
Query: 519 TIV---------------PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTL 563
L +VS L EP +LY+ YD + P S +M L
Sbjct: 287 RAANLWPSPLMIKRSKKNSLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLL 346
Query: 564 NMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCF 623
L R+++ + WAK +PGF +L L DQ+ LL+ +W+ ++ L WRS L F
Sbjct: 347 TNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGK--LLF 404
Query: 624 APDLIIN-EQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS----VPKD 678
AP+L+++ Q + M + +L SS + + EE++C+K+++LL+S
Sbjct: 405 APNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSS 464
Query: 679 GLKSQE-------LFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLL 722
LKS E + D+I T I + KA + + Q QR QL +L
Sbjct: 465 TLKSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQ----QQHQRLAQLLLIL 511
>gi|62821794 estrogen receptor alpha isoform 1 [Homo sapiens]
Length = 595
Score = 164 bits (416), Expect = 2e-40
Identities = 111/351 (31%), Positives = 171/351 (48%), Gaps = 37/351 (10%)
Query: 403 SSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRND 462
S+ S + + C VC+D ASG HYGV +C CK FFKR+++G ++Y+C N
Sbjct: 167 STNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQ 226
Query: 463 CIIDKIRRKNCPACRYRKCLQAGMN----LEARKTKKKIKGIQQATTGVSQETSENPGNK 518
C IDK RRK+C ACR RKC + GM + R+ + +K +Q G + + G+
Sbjct: 227 CTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRGEVGSAGDM 286
Query: 519 TIV---------------PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTL 563
L +VS L EP +LY+ YD + P S +M L
Sbjct: 287 RAANLWPSPLMIKRSKKNSLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLL 346
Query: 564 NMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCF 623
L R+++ + WAK +PGF +L L DQ+ LL+ +W+ ++ L WRS L F
Sbjct: 347 TNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGK--LLF 404
Query: 624 APDLIIN-EQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS----VPKD 678
AP+L+++ Q + M + +L SS + + EE++C+K+++LL+S
Sbjct: 405 APNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSS 464
Query: 679 GLKSQE-------LFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLL 722
LKS E + D+I T I + KA + + Q QR QL +L
Sbjct: 465 TLKSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQ----QQHQRLAQLLLIL 511
>gi|94538328 estrogen receptor beta isoform 2 [Homo sapiens]
Length = 495
Score = 161 bits (408), Expect = 2e-39
Identities = 110/351 (31%), Positives = 181/351 (51%), Gaps = 26/351 (7%)
Query: 410 STATTGPPPK----LCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCII 465
++ TGP K C VCSD ASG HYGV +C CK FFKR+++G ++Y+C N C I
Sbjct: 134 ASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTI 193
Query: 466 DKIRRKNCPACRYRKCLQAGM-NLEARKTKKKIKGIQQATTGVSQETSENPGNKT----- 519
DK RRK+C ACR RKC + GM +R+ + + +++ + Q ++
Sbjct: 194 DKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAP 253
Query: 520 -IVPATLPQLTP--TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVK 576
+ L L+P +++LLE P VL + S P + +M +L L ++++ +
Sbjct: 254 RVRELLLDALSPEQLVLTLLEAEPPHVLIS--RPSAPFTEASMMMSLTKLADKELVHMIS 311
Query: 577 WAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIIN-EQRMT 635
WAK IPGF L L DQ+ LL+ WM ++ L WRS L FAPDL+++ ++
Sbjct: 312 WAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSI--DHPGKLIFAPDLVLDRDEGKC 369
Query: 636 LPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR----- 690
+ + + +L +S L++ ++EYLC+K ++LL+S + + + D R
Sbjct: 370 VEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHL 429
Query: 691 MTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHENVMWLKPESTSHTL 741
+ + + ++ + G SSQ Q+ +L LL + +V + E S TL
Sbjct: 430 LNAVTDALVWVIAKSGISSQ--QQSMRLANLL-MLLSHVRHARAEKASQTL 477
>gi|94538325 estrogen receptor beta isoform 2 [Homo sapiens]
Length = 495
Score = 161 bits (408), Expect = 2e-39
Identities = 110/351 (31%), Positives = 181/351 (51%), Gaps = 26/351 (7%)
Query: 410 STATTGPPPK----LCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCII 465
++ TGP K C VCSD ASG HYGV +C CK FFKR+++G ++Y+C N C I
Sbjct: 134 ASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTI 193
Query: 466 DKIRRKNCPACRYRKCLQAGM-NLEARKTKKKIKGIQQATTGVSQETSENPGNKT----- 519
DK RRK+C ACR RKC + GM +R+ + + +++ + Q ++
Sbjct: 194 DKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAP 253
Query: 520 -IVPATLPQLTP--TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVK 576
+ L L+P +++LLE P VL + S P + +M +L L ++++ +
Sbjct: 254 RVRELLLDALSPEQLVLTLLEAEPPHVLIS--RPSAPFTEASMMMSLTKLADKELVHMIS 311
Query: 577 WAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIIN-EQRMT 635
WAK IPGF L L DQ+ LL+ WM ++ L WRS L FAPDL+++ ++
Sbjct: 312 WAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSI--DHPGKLIFAPDLVLDRDEGKC 369
Query: 636 LPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR----- 690
+ + + +L +S L++ ++EYLC+K ++LL+S + + + D R
Sbjct: 370 VEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHL 429
Query: 691 MTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHENVMWLKPESTSHTL 741
+ + + ++ + G SSQ Q+ +L LL + +V + E S TL
Sbjct: 430 LNAVTDALVWVIAKSGISSQ--QQSMRLANLL-MLLSHVRHARAEKASQTL 477
>gi|10835013 estrogen receptor beta isoform 1 [Homo sapiens]
Length = 530
Score = 160 bits (404), Expect = 5e-39
Identities = 95/279 (34%), Positives = 152/279 (54%), Gaps = 18/279 (6%)
Query: 410 STATTGPPPK----LCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCII 465
++ TGP K C VCSD ASG HYGV +C CK FFKR+++G ++Y+C N C I
Sbjct: 134 ASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTI 193
Query: 466 DKIRRKNCPACRYRKCLQAGM-NLEARKTKKKIKGIQQATTGVSQETSENPGNKT----- 519
DK RRK+C ACR RKC + GM +R+ + + +++ + Q ++
Sbjct: 194 DKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAP 253
Query: 520 -IVPATLPQLTP--TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVK 576
+ L L+P +++LLE P VL + S P + +M +L L ++++ +
Sbjct: 254 RVRELLLDALSPEQLVLTLLEAEPPHVLIS--RPSAPFTEASMMMSLTKLADKELVHMIS 311
Query: 577 WAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIIN-EQRMT 635
WAK IPGF L L DQ+ LL+ WM ++ L WRS L FAPDL+++ ++
Sbjct: 312 WAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSI--DHPGKLIFAPDLVLDRDEGKC 369
Query: 636 LPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS 674
+ + + +L +S L++ ++EYLC+K ++LL+S
Sbjct: 370 VEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNS 408
>gi|5453822 nuclear receptor subfamily 4, group A, member 2 [Homo
sapiens]
Length = 598
Score = 120 bits (300), Expect = 6e-27
Identities = 104/398 (26%), Positives = 173/398 (43%), Gaps = 34/398 (8%)
Query: 340 SLSQQQDQKPIFNVIPPIPVGSENWNRCQGSGDDN-LTSLGTLNFPGRTVFSNGYSSPSM 398
S Q + P+ + P P GS + Q N + ++ FPG + G++S +
Sbjct: 188 SSCQMRFDGPLHVPMNPEPAGSHHVVDGQTFAVPNPIRKPASMGFPGLQI---GHASQLL 244
Query: 399 RPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCA 458
V SPPS S + G LC VC D A+ HYGV TC CK FFKR V+ Y+C
Sbjct: 245 DTQVPSPPSRGSPSNEG----LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCL 300
Query: 459 GRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTK--KKIKGIQQATTGVSQETSENPG 516
+C +DK RR C CR++KCL GM E +T K +G + QE S
Sbjct: 301 ANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSP 360
Query: 517 NKTIVPATL-------PQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGR 569
+++ A + P +T S + P+ +G D+ + ++T G
Sbjct: 361 PVSLISALVRAHVDSNPAMTSLDYSRFQA-NPDYQMSGDDTQHIQQFYDLLT-----GSM 414
Query: 570 QVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLII 629
++I WA+ IPGF +L DQ L + +++ L L +RS + C + ++
Sbjct: 415 EIIRG--WAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFC---NGVV 469
Query: 630 NEQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEI 689
+ + + ++ SS L + + + C+ L +++ + GLK + +E+
Sbjct: 470 LHRLQCVRGFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMVTE--RHGLKEPKRVEEL 527
Query: 690 RMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHE 727
+ + L + G + R L+KLL + E
Sbjct: 528 QNKIVNCLKDHVTFNNGGLN----RPNYLSKLLGKLPE 561
>gi|20070199 nuclear receptor subfamily 2, group F, member 6 [Homo
sapiens]
Length = 404
Score = 119 bits (298), Expect = 1e-26
Identities = 86/285 (30%), Positives = 127/285 (44%), Gaps = 15/285 (5%)
Query: 401 DVSSPPSSSSTATTGPPPKL-----CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNY 455
D +SPP ++S A G + C+VC D++SG HYGV TC CK FFKR++ +Y
Sbjct: 31 DSASPPGAASDAEPGDEERPGLQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSY 90
Query: 456 LCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENP 515
C DC ID+ R C CR +KC + GM EA + + + A V+ + P
Sbjct: 91 TCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQRGRIPHSLPGA---VAASSGSPP 147
Query: 516 GNKTIVPATLPQLTP-----TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNM--LGG 568
G+ A+ L P L++ L EP AG + + ++ N+ L
Sbjct: 148 GSALAAVASGGDLFPGQPVSELIAQLLRAEPYPAAAGRFGAGGGAAGAVLGIDNVCELAA 207
Query: 569 RQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLI 628
R + + V+WA+ P F L + DQ+ LL+ SW L + +A LL A
Sbjct: 208 RLLFSTVEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAALPLHTAPLLAAAGLHA 267
Query: 629 INEQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLS 673
DQ + +L RLQV EY C+K + L +
Sbjct: 268 APMAAERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFT 312
>gi|27894344 nuclear receptor subfamily 4, group A, member 1 [Homo
sapiens]
Length = 598
Score = 117 bits (294), Expect = 3e-26
Identities = 145/513 (28%), Positives = 215/513 (41%), Gaps = 58/513 (11%)
Query: 216 DLLIDENCLLSPLAGEDDSFLLEGNSNE-DCKPLILPDT-KPKIKDNGDLVLSSPSNVTL 273
DL E +P A S ++G + E D LP T +P + +S S+ T
Sbjct: 36 DLASPEAAPAAPTALPSFSTFMDGYTGEFDTFLYQLPGTVQPCSSASSSASSTSSSSATS 95
Query: 274 PQVKTEK-EDF-IELCTPGVIKQEKLGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQM 331
P + K EDF + C PG + G V S G++ G+ SA S S Q+
Sbjct: 96 PASASFKFEDFQVYGCYPGPLS----GPVDEALSSSGSDYYGSPCSAPSPSTPSFQPPQL 151
Query: 332 YHYDMNTASLSQQQ---------DQKPIFNVIPPIPVGSENWNRCQGSGDDNLTSLGTLN 382
+D + S Q +Q P + PP P +++ G S L
Sbjct: 152 SPWDGSFGHFSPSQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGPSPSLAQSPLKL- 209
Query: 383 FPGRTVFSNG----YSSPSMRPDVS--SP----------PSSSSTATTGPP---PKLCLV 423
FP + G YS P+ P ++ SP P +S+ A +G P C V
Sbjct: 210 FPSQATHQLGEGESYSMPTAFPGLAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGRCAV 269
Query: 424 CSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQ 483
C D AS HYGV TC CK FFKR V+ Y+C DC +DK RR C CR++KCL
Sbjct: 270 CGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLA 329
Query: 484 AGMNLEARKTKKKIKGIQ-QATTGVSQETSENPGN--KTIVPATLPQLTPTLVSLLEVIE 540
GM E +T +KG + + + Q +P N ++V A L P+ L
Sbjct: 330 VGMVKEVVRT-DSLKGRRGRLPSKPKQPPDASPANLLTSLVRAHLDS-GPSTAKLDYSKF 387
Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
E++ + + L+ G +VI KWA+ IPGF L DQ LL+ ++
Sbjct: 388 QELVLPHFGKEDAGDVQQFYDLLS--GSLEVIR--KWAEKIPGFAELSPADQDLLLESAF 443
Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPC---MYDQCKHMLYVSSELHRLQ 657
+ L L +RS + L F L+++ L C D +L S LH L
Sbjct: 444 LELFILRLAYRS--KPGEGKLIFCSGLVLHR----LQCARGFGDWIDSILAFSRSLHSLL 497
Query: 658 VSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR 690
V + C+ L+L++ + GL+ +E++
Sbjct: 498 VDVPAFACLSALVLITD--RHGLQEPRRVEELQ 528
>gi|21361342 nuclear receptor subfamily 4, group A, member 1 [Homo
sapiens]
Length = 598
Score = 117 bits (294), Expect = 3e-26
Identities = 145/513 (28%), Positives = 215/513 (41%), Gaps = 58/513 (11%)
Query: 216 DLLIDENCLLSPLAGEDDSFLLEGNSNE-DCKPLILPDT-KPKIKDNGDLVLSSPSNVTL 273
DL E +P A S ++G + E D LP T +P + +S S+ T
Sbjct: 36 DLASPEAAPAAPTALPSFSTFMDGYTGEFDTFLYQLPGTVQPCSSASSSASSTSSSSATS 95
Query: 274 PQVKTEK-EDF-IELCTPGVIKQEKLGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQM 331
P + K EDF + C PG + G V S G++ G+ SA S S Q+
Sbjct: 96 PASASFKFEDFQVYGCYPGPLS----GPVDEALSSSGSDYYGSPCSAPSPSTPSFQPPQL 151
Query: 332 YHYDMNTASLSQQQ---------DQKPIFNVIPPIPVGSENWNRCQGSGDDNLTSLGTLN 382
+D + S Q +Q P + PP P +++ G S L
Sbjct: 152 SPWDGSFGHFSPSQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGPSPSLAQSPLKL- 209
Query: 383 FPGRTVFSNG----YSSPSMRPDVS--SP----------PSSSSTATTGPP---PKLCLV 423
FP + G YS P+ P ++ SP P +S+ A +G P C V
Sbjct: 210 FPSQATHQLGEGESYSMPTAFPGLAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGRCAV 269
Query: 424 CSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQ 483
C D AS HYGV TC CK FFKR V+ Y+C DC +DK RR C CR++KCL
Sbjct: 270 CGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLA 329
Query: 484 AGMNLEARKTKKKIKGIQ-QATTGVSQETSENPGN--KTIVPATLPQLTPTLVSLLEVIE 540
GM E +T +KG + + + Q +P N ++V A L P+ L
Sbjct: 330 VGMVKEVVRT-DSLKGRRGRLPSKPKQPPDASPANLLTSLVRAHLDS-GPSTAKLDYSKF 387
Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
E++ + + L+ G +VI KWA+ IPGF L DQ LL+ ++
Sbjct: 388 QELVLPHFGKEDAGDVQQFYDLLS--GSLEVIR--KWAEKIPGFAELSPADQDLLLESAF 443
Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPC---MYDQCKHMLYVSSELHRLQ 657
+ L L +RS + L F L+++ L C D +L S LH L
Sbjct: 444 LELFILRLAYRS--KPGEGKLIFCSGLVLHR----LQCARGFGDWIDSILAFSRSLHSLL 497
Query: 658 VSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR 690
V + C+ L+L++ + GL+ +E++
Sbjct: 498 VDVPAFACLSALVLITD--RHGLQEPRRVEELQ 528
>gi|4506755 retinoid X receptor, alpha [Homo sapiens]
Length = 462
Score = 116 bits (291), Expect = 7e-26
Identities = 105/392 (26%), Positives = 170/392 (43%), Gaps = 43/392 (10%)
Query: 316 MSAISVH-----GVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVGSENWNRCQGS 370
M+A S+H G+ + G H ++T S PI + PP V S G
Sbjct: 28 MAAPSLHPSLGPGIGSPG--QLHSPISTLS-------SPINGMGPPFSVISSP----MGP 74
Query: 371 GDDNLTSLGTLNFP-GRTVFSNGYSSPSMRPDVSSP---------PSSSSTATTGPPPKL 420
++ + TL F G S+ + S D+ P P+ S +
Sbjct: 75 HSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHI 134
Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
C +C D +SG HYGV +C CK FFKR V Y C DC+IDK +R C CRY+K
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQK 194
Query: 481 CLQAGMNLEA-RKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVI 539
CL GM EA ++ +++ K + + +E+ + I+ A L + P + +E
Sbjct: 195 CLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAEL-AVEPKTETYVEA- 252
Query: 540 EPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYS 599
G + S P+ +T + +Q+ V+WAK IP F L LDDQ+ LL+
Sbjct: 253 -----NMGLNPSSPNDP---VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAG 304
Query: 600 WMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMT-LPCMYDQCKHMLYVSSELHRLQV 658
W L+ + RS LL + N + ++D+ + + S++ +Q+
Sbjct: 305 WNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRV--LTELVSKMRDMQM 362
Query: 659 SYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR 690
E C++ ++L + K GL + + +R
Sbjct: 363 DKTELGCLRAIVLFNPDSK-GLSNPAEVEALR 393
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 115 bits (287), Expect = 2e-25
Identities = 94/353 (26%), Positives = 147/353 (41%), Gaps = 28/353 (7%)
Query: 354 IPPIPVGSENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTAT 413
+PP P+GS G L F G S+ S+ S PP
Sbjct: 124 MPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPV 183
Query: 414 TG-------PPP-------KLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAG 459
G PPP +LC +C D +SG HYGV +C CK FFKR + Y C
Sbjct: 184 LGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRD 243
Query: 460 RNDCIIDKIRRKNCPACRYRKCLQAGMNLEA-RKTKKKIKGIQQATTGVSQETSENPGNK 518
DC +DK +R C CRY+KCL GM EA ++ +++ K G E P ++
Sbjct: 244 NKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDR 303
Query: 519 TIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWA 578
+ + + +E G SS D +T + +Q+ V+WA
Sbjct: 304 ILEAELAVEQKSD-----QGVEGPGGTGGSGSSPNDP----VTNICQAADKQLFTLVEWA 354
Query: 579 KAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMT-LP 637
K IP F +L LDDQ+ LL+ W L+ + RS LL + N +
Sbjct: 355 KRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVG 414
Query: 638 CMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR 690
++D+ + + S++ +++ E C++ ++L + K GL + + +R
Sbjct: 415 AIFDRV--LTELVSKMRDMRMDKTELGCLRAIILFNPDAK-GLSNPSEVEVLR 464
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,268,136
Number of Sequences: 37866
Number of extensions: 1444767
Number of successful extensions: 4485
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 4139
Number of HSP's gapped (non-prelim): 283
length of query: 742
length of database: 18,247,518
effective HSP length: 110
effective length of query: 632
effective length of database: 14,082,258
effective search space: 8899987056
effective search space used: 8899987056
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.