Guide to the Human Genome
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Name: PGR Sequence: fasta or formatted (933aa) NCBI GI: 110611914
Description:

progesterone receptor

Referenced in:

Organs and Hormones
Nuclear Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0        103           4
 C cysteine            2.6         24           2
 D aspartate           4.2         39           2
 E glutamate           5.5         51           4
 F phenylalanine       3.1         29           2
 G glycine             7.8         73           3
 H histidine           1.4         13           1
 I isoleucine          2.9         27           1
 K lysine              4.4         41           2
 L leucine            11.3        105           4
 M methionine          1.8         17           2
 N asparagine          1.8         17           1
 P proline            11.0        103           4
 Q glutamine           5.0         47           2
 R arginine            4.5         42           2
 S serine             10.2         95           4
 T threonine           3.0         28           2
 V valine              5.4         50           2
 W tryptophan          0.6          6           1
 Y tyrosine            2.5         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   progesterone receptor 
AR                    0.229   androgen receptor isoform 1 
NR3C2                 0.226   nuclear receptor subfamily 3, group C, member 2 [Ho...
AR                    0.225   androgen receptor isoform 2 
NR3C1                 0.219   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.219   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.219   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.219   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.219   nuclear receptor subfamily 3, group C, member 1 isofo...
NR3C1                 0.216   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.193   nuclear receptor subfamily 3, group C, member 1 isof...
ESRRB                 0.083   estrogen-related receptor beta 
ESR1                  0.083   estrogen receptor alpha isoform 4 
ESR1                  0.083   estrogen receptor alpha isoform 3 
ESR1                  0.083   estrogen receptor alpha isoform 2 
ESR1                  0.083   estrogen receptor alpha isoform 1 
ESRRG                 0.081   estrogen-related receptor gamma isoform 2 
ESRRG                 0.081   estrogen-related receptor gamma isoform 2 
ESRRG                 0.081   estrogen-related receptor gamma isoform 1 
ESRRG                 0.081   estrogen-related receptor gamma isoform 2 
ESRRA                 0.079   estrogen-related receptor alpha 
ESR2                  0.078   estrogen receptor beta isoform 2 
ESR2                  0.078   estrogen receptor beta isoform 2 
ESR2                  0.078   estrogen receptor beta isoform 1 
RXRG                  0.051   retinoid X receptor, gamma isoform a 
RXRA                  0.051   retinoid X receptor, alpha 
RXRB                  0.051   retinoid X receptor, beta 
HNF4G                 0.050   hepatocyte nuclear factor 4, gamma 
NR2F6                 0.049   nuclear receptor subfamily 2, group F, member 6 [Hom...
NR4A3                 0.046   nuclear receptor subfamily 4, group A, member 3 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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