Search of human proteins with 66528611

Search of human proteins with 66528611

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|66528611 nuclear receptor subfamily 3, group C, member 1
isoform alpha [Homo sapiens]
         (777 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|66528611 nuclear receptor subfamily 3, group C, member 1 isof...  1564   0.0  
gi|66528586 nuclear receptor subfamily 3, group C, member 1 isof...  1564   0.0  
gi|66528563 nuclear receptor subfamily 3, group C, member 1 isof...  1564   0.0  
gi|66528530 nuclear receptor subfamily 3, group C, member 1 isof...  1564   0.0  
gi|4504133 nuclear receptor subfamily 3, group C, member 1 isofo...  1564   0.0  
gi|66528677 nuclear receptor subfamily 3, group C, member 1 isof...  1560   0.0  
gi|66528642 nuclear receptor subfamily 3, group C, member 1 isof...  1464   0.0  
gi|158508572 nuclear receptor subfamily 3, group C, member 2 [Ho...   471   e-132
gi|110611914 progesterone receptor [Homo sapiens]                     430   e-120
gi|58535455 androgen receptor isoform 2 [Homo sapiens]                391   e-108
gi|21322252 androgen receptor isoform 1 [Homo sapiens]                391   e-108
gi|45545429 estrogen-related receptor gamma isoform 2 [Homo sapi...   180   4e-45
gi|45545427 estrogen-related receptor gamma isoform 2 [Homo sapi...   180   4e-45
gi|45545433 estrogen-related receptor gamma isoform 1 [Homo sapi...   180   4e-45
gi|197209821 estrogen-related receptor gamma isoform 2 [Homo sap...   180   4e-45
gi|238550159 estrogen-related receptor beta [Homo sapiens]            173   6e-43
gi|18860920 estrogen-related receptor alpha [Homo sapiens]            167   3e-41
gi|170295804 estrogen receptor alpha isoform 4 [Homo sapiens]         165   2e-40
gi|170295802 estrogen receptor alpha isoform 3 [Homo sapiens]         165   2e-40
gi|170295800 estrogen receptor alpha isoform 2 [Homo sapiens]         165   2e-40
gi|62821794 estrogen receptor alpha isoform 1 [Homo sapiens]          165   2e-40
gi|94538328 estrogen receptor beta isoform 2 [Homo sapiens]           160   3e-39
gi|94538325 estrogen receptor beta isoform 2 [Homo sapiens]           160   3e-39
gi|10835013 estrogen receptor beta isoform 1 [Homo sapiens]           160   4e-39
gi|5453822 nuclear receptor subfamily 4, group A, member 2 [Homo...   120   5e-27
gi|20070199 nuclear receptor subfamily 2, group F, member 6 [Hom...   119   1e-26
gi|27894344 nuclear receptor subfamily 4, group A, member 1 [Hom...   117   3e-26
gi|21361342 nuclear receptor subfamily 4, group A, member 1 [Hom...   117   3e-26
gi|4506755 retinoid X receptor, alpha [Homo sapiens]                  116   7e-26
gi|11415052 retinoid X receptor, beta [Homo sapiens]                  115   2e-25

>gi|66528611 nuclear receptor subfamily 3, group C, member 1 isoform
           alpha [Homo sapiens]
          Length = 777

 Score = 1564 bits (4050), Expect = 0.0
 Identities = 777/777 (100%), Positives = 777/777 (100%)

Query: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
           MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60

Query: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
           LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120

Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
           LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180

Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
           VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240

Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
           SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300

Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
           YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360

Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
           SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420

Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
           CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480

Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
           CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540

Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
           PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600

Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
           MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660

Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
           EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720

Query: 721 LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777
           LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK
Sbjct: 721 LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777


>gi|66528586 nuclear receptor subfamily 3, group C, member 1 isoform
           alpha [Homo sapiens]
          Length = 777

 Score = 1564 bits (4050), Expect = 0.0
 Identities = 777/777 (100%), Positives = 777/777 (100%)

Query: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
           MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60

Query: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
           LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120

Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
           LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180

Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
           VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240

Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
           SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300

Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
           YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360

Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
           SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420

Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
           CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480

Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
           CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540

Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
           PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600

Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
           MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660

Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
           EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720

Query: 721 LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777
           LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK
Sbjct: 721 LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777


>gi|66528563 nuclear receptor subfamily 3, group C, member 1 isoform
           alpha [Homo sapiens]
          Length = 777

 Score = 1564 bits (4050), Expect = 0.0
 Identities = 777/777 (100%), Positives = 777/777 (100%)

Query: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
           MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60

Query: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
           LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120

Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
           LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180

Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
           VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240

Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
           SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300

Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
           YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360

Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
           SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420

Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
           CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480

Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
           CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540

Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
           PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600

Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
           MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660

Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
           EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720

Query: 721 LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777
           LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK
Sbjct: 721 LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777


>gi|66528530 nuclear receptor subfamily 3, group C, member 1 isoform
           alpha [Homo sapiens]
          Length = 777

 Score = 1564 bits (4050), Expect = 0.0
 Identities = 777/777 (100%), Positives = 777/777 (100%)

Query: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
           MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60

Query: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
           LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120

Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
           LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180

Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
           VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240

Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
           SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300

Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
           YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360

Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
           SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420

Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
           CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480

Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
           CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540

Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
           PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600

Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
           MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660

Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
           EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720

Query: 721 LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777
           LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK
Sbjct: 721 LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777


>gi|4504133 nuclear receptor subfamily 3, group C, member 1 isoform
           alpha [Homo sapiens]
          Length = 777

 Score = 1564 bits (4050), Expect = 0.0
 Identities = 777/777 (100%), Positives = 777/777 (100%)

Query: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
           MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60

Query: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
           LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120

Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
           LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180

Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
           VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240

Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
           SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300

Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
           YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360

Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
           SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420

Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
           CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480

Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
           CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540

Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
           PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600

Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
           MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660

Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
           EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720

Query: 721 LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777
           LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK
Sbjct: 721 LLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777


>gi|66528677 nuclear receptor subfamily 3, group C, member 1 isoform
           gamma [Homo sapiens]
          Length = 778

 Score = 1560 bits (4038), Expect = 0.0
 Identities = 777/778 (99%), Positives = 777/778 (99%), Gaps = 1/778 (0%)

Query: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
           MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60

Query: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
           LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120

Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
           LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180

Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
           VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240

Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
           SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300

Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
           YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360

Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
           SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420

Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEG-QHNYLCAGRNDCIIDKIRRKNCPACRYR 479
           CLVCSDEASGCHYGVLTCGSCKVFFKRAVEG QHNYLCAGRNDCIIDKIRRKNCPACRYR
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGRQHNYLCAGRNDCIIDKIRRKNCPACRYR 480

Query: 480 KCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVI 539
           KCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVI
Sbjct: 481 KCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVI 540

Query: 540 EPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYS 599
           EPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYS
Sbjct: 541 EPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYS 600

Query: 600 WMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVS 659
           WMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVS
Sbjct: 601 WMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVS 660

Query: 660 YEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLT 719
           YEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLT
Sbjct: 661 YEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLT 720

Query: 720 KLLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777
           KLLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK
Sbjct: 721 KLLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 778


>gi|66528642 nuclear receptor subfamily 3, group C, member 1 isoform
           beta [Homo sapiens]
          Length = 742

 Score = 1464 bits (3791), Expect = 0.0
 Identities = 728/729 (99%), Positives = 728/729 (99%)

Query: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60
           MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR
Sbjct: 1   MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRR 60

Query: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120
           LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK
Sbjct: 61  LLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLK 120

Query: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180
           LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN
Sbjct: 121 LLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGN 180

Query: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240
           VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN
Sbjct: 181 VKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGN 240

Query: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300
           SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV
Sbjct: 241 SNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTV 300

Query: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360
           YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG
Sbjct: 301 YCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVG 360

Query: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420
           SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL
Sbjct: 361 SENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKL 420

Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
           CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK
Sbjct: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480

Query: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540
           CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE
Sbjct: 481 CLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIE 540

Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
           PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW
Sbjct: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600

Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660
           MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY
Sbjct: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSY 660

Query: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720
           EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK
Sbjct: 661 EEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTK 720

Query: 721 LLDSMHEVV 729
           LLDSMHE V
Sbjct: 721 LLDSMHENV 729


>gi|158508572 nuclear receptor subfamily 3, group C, member 2 [Homo
           sapiens]
          Length = 984

 Score =  471 bits (1212), Expect = e-132
 Identities = 255/518 (49%), Positives = 332/518 (64%), Gaps = 55/518 (10%)

Query: 290 GVIKQEKLGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMN---TASLSQQQD 346
           G+ ++   G+ Y +AS P + I+G             SGGQ +HY +    T SLS+   
Sbjct: 492 GIKQEPDDGSYYPEASIPSSAIVG-----------VNSGGQSFHYRIGAQGTISLSRSAR 540

Query: 347 QKPIFNV--IPPIPVGSENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSS 404
            +   ++   PP+    E+W   +  GD  L+S  +  +P         SS ++R     
Sbjct: 541 DQSFQHLSSFPPVNTLVESW---KSHGD--LSSRRSDGYPVLEYIPENVSSSTLR----- 590

Query: 405 PPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCI 464
               S +  +  P K+CLVC DEASGCHYGV+TCGSCKVFFKRAVEGQHNYLCAGRNDCI
Sbjct: 591 ----SVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYLCAGRNDCI 646

Query: 465 IDKIRRKNCPACRYRKCLQAGMNLEARKTKK--KIKGIQQATTGVSQETSENP------- 515
           IDKIRRKNCPACR +KCLQAGMNL ARK+KK  K+KGI +      Q     P       
Sbjct: 647 IDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGIHEEQPQQQQPPPPPPPPQSPEE 706

Query: 516 GNKTIVPATLPQ---------------LTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIM 560
           G   I PA  P                LTP+ V +LE IEPE++YAGYDSS PD+   ++
Sbjct: 707 GTTYIAPAKEPSVNTALVPQLSTISRALTPSPVMVLENIEPEIVYAGYDSSKPDTAENLL 766

Query: 561 TTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANL 620
           +TLN L G+Q+I  VKWAK +PGF+NL L+DQ+TL+QYSWM L +FAL WRSY+ +++  
Sbjct: 767 STLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQF 826

Query: 621 LCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGL 680
           L FAPDL+ NE++M    MY+ C+ M  +S +  RLQ+++EEY  MK LLLLS++PKDGL
Sbjct: 827 LYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFEEYTIMKVLLLLSTIPKDGL 886

Query: 681 KSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEVVENLLNYCFQTF 740
           KSQ  F+E+R  YIKEL K + K   NS Q+WQRFYQLTKLLDSMH++V +LL +CF TF
Sbjct: 887 KSQAAFEEMRTNYIKELRKMVTKCPNNSGQSWQRFYQLTKLLDSMHDLVSDLLEFCFYTF 946

Query: 741 LDK-TMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777
            +   + +EFP ML EII++Q+PK  +GN K L FH+K
Sbjct: 947 RESHALKVEFPAMLVEIISDQLPKVESGNAKPLYFHRK 984


>gi|110611914 progesterone receptor [Homo sapiens]
          Length = 933

 Score =  430 bits (1105), Expect = e-120
 Identities = 214/390 (54%), Positives = 278/390 (71%), Gaps = 11/390 (2%)

Query: 398 MRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLC 457
           +RPD S    S   +    P K+CL+C DEASGCHYGVLTCGSCKVFFKRA+EGQHNYLC
Sbjct: 545 LRPD-SEASQSPQYSFESLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLC 603

Query: 458 AGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKK--KIKGIQQATT-------GVS 508
           AGRNDCI+DKIRRKNCPACR RKC QAGM L  RK KK  K++ ++           GV 
Sbjct: 604 AGRNDCIVDKIRRKNCPACRLRKCCQAGMVLGGRKFKKFNKVRVVRALDAVALPQPVGVP 663

Query: 509 QETSENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGG 568
            E+       T  P    QL P L++LL  IEP+V+YAG+D++ PD++  ++T+LN LG 
Sbjct: 664 NESQALSQRFTFSPGQDIQLIPPLINLLMSIEPDVIYAGHDNTKPDTSSSLLTSLNQLGE 723

Query: 569 RQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLI 628
           RQ+++ VKW+K++PGFRNLH+DDQ+TL+QYSWM LM F LGWRSY+  S  +L FAPDLI
Sbjct: 724 RQLLSVVKWSKSLPGFRNLHIDDQITLIQYSWMSLMVFGLGWRSYKHVSGQMLYFAPDLI 783

Query: 629 INEQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDE 688
           +NEQRM     Y  C  M  +  E  +LQVS EE+LCMK LLLL+++P +GL+SQ  F+E
Sbjct: 784 LNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEFLCMKVLLLLNTIPLEGLRSQTQFEE 843

Query: 689 IRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEVVENLLNYCFQTFL-DKTMSI 747
           +R +YI+EL KAI  R+     + QRFYQLTKLLD++H++V+ L  YC  TF+  + +S+
Sbjct: 844 MRSSYIRELIKAIGLRQKGVVSSSQRFYQLTKLLDNLHDLVKQLHLYCLNTFIQSRALSV 903

Query: 748 EFPEMLAEIITNQIPKYSNGNIKKLLFHQK 777
           EFPEM++E+I  Q+PK   G +K LLFH+K
Sbjct: 904 EFPEMMSEVIAAQLPKILAGMVKPLLFHKK 933


>gi|58535455 androgen receptor isoform 2 [Homo sapiens]
          Length = 388

 Score =  391 bits (1005), Expect = e-108
 Identities = 192/367 (52%), Positives = 254/367 (69%), Gaps = 10/367 (2%)

Query: 416 PPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPA 475
           PP K CL+C DEASGCHYG LTCGSCKVFFKRA EG+  YLCA RNDC IDK RRKNCP+
Sbjct: 23  PPQKTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPS 82

Query: 476 CRYRKCLQAGMNLEARKTKK------KIKGIQQATTGVSQETSENPGNKTIVPATLPQLT 529
           CR RKC +AGM L ARK KK      + +G   +TT  ++ET++     T+      +  
Sbjct: 83  CRLRKCYEAGMTLGARKLKKLGNLKLQEEGEASSTTSPTEETTQK---LTVSHIEGYECQ 139

Query: 530 PTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 589
           P  +++LE IEP V+ AG+D++ PDS   ++++LN LG RQ++  VKWAKA+PGFRNLH+
Sbjct: 140 PIFLNVLEAIEPGVVCAGHDNNQPDSFAALLSSLNELGERQLVHVVKWAKALPGFRNLHV 199

Query: 590 DDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYV 649
           DDQM ++QYSWM LM FA+GWRS+   ++ +L FAPDL+ NE RM    MY QC  M ++
Sbjct: 200 DDQMAVIQYSWMGLMVFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHL 259

Query: 650 SSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSS 709
           S E   LQ++ +E+LCMK LLL S +P DGLK+Q+ FDE+RM YIKEL + I  +  N +
Sbjct: 260 SQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIACKRKNPT 319

Query: 710 QNWQRFYQLTKLLDSMHEVVENLLNYCFQTFLDKTM-SIEFPEMLAEIITNQIPKYSNGN 768
              +RFYQLTKLLDS+  +   L  + F   +   M S++FPEM+AEII+ Q+PK  +G 
Sbjct: 320 SCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVSVDFPEMMAEIISVQVPKILSGK 379

Query: 769 IKKLLFH 775
           +K + FH
Sbjct: 380 VKPIYFH 386


>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
          Length = 920

 Score =  391 bits (1005), Expect = e-108
 Identities = 192/367 (52%), Positives = 254/367 (69%), Gaps = 10/367 (2%)

Query: 416 PPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPA 475
           PP K CL+C DEASGCHYG LTCGSCKVFFKRA EG+  YLCA RNDC IDK RRKNCP+
Sbjct: 555 PPQKTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPS 614

Query: 476 CRYRKCLQAGMNLEARKTKK------KIKGIQQATTGVSQETSENPGNKTIVPATLPQLT 529
           CR RKC +AGM L ARK KK      + +G   +TT  ++ET++     T+      +  
Sbjct: 615 CRLRKCYEAGMTLGARKLKKLGNLKLQEEGEASSTTSPTEETTQK---LTVSHIEGYECQ 671

Query: 530 PTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 589
           P  +++LE IEP V+ AG+D++ PDS   ++++LN LG RQ++  VKWAKA+PGFRNLH+
Sbjct: 672 PIFLNVLEAIEPGVVCAGHDNNQPDSFAALLSSLNELGERQLVHVVKWAKALPGFRNLHV 731

Query: 590 DDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYV 649
           DDQM ++QYSWM LM FA+GWRS+   ++ +L FAPDL+ NE RM    MY QC  M ++
Sbjct: 732 DDQMAVIQYSWMGLMVFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHL 791

Query: 650 SSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSS 709
           S E   LQ++ +E+LCMK LLL S +P DGLK+Q+ FDE+RM YIKEL + I  +  N +
Sbjct: 792 SQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIIACKRKNPT 851

Query: 710 QNWQRFYQLTKLLDSMHEVVENLLNYCFQTFLDKTM-SIEFPEMLAEIITNQIPKYSNGN 768
              +RFYQLTKLLDS+  +   L  + F   +   M S++FPEM+AEII+ Q+PK  +G 
Sbjct: 852 SCSRRFYQLTKLLDSVQPIARELHQFTFDLLIKSHMVSVDFPEMMAEIISVQVPKILSGK 911

Query: 769 IKKLLFH 775
           +K + FH
Sbjct: 912 VKPIYFH 918


>gi|45545429 estrogen-related receptor gamma isoform 2 [Homo
           sapiens]
          Length = 435

 Score =  180 bits (457), Expect = 4e-45
 Identities = 102/273 (37%), Positives = 150/273 (54%), Gaps = 4/273 (1%)

Query: 402 VSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRN 461
           V  P +         P +LCLVC D ASG HYGV +C +CK FFKR ++G   Y C   N
Sbjct: 86  VEDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATN 145

Query: 462 DCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIV 521
           +C I K RRK+C ACR+ KCL+ GM  E  +  +   G Q+    +  E S     + + 
Sbjct: 146 ECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQ 205

Query: 522 PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAI 581
           PA  P     +VS L V EPE +YA  D +VPDS  + +TTL  L  R+++  + WAK I
Sbjct: 206 PAKKPY--NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHI 263

Query: 582 PGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYD 641
           PGF  L L DQM+LLQ +WM ++   + +RS   S  + L +A D I++E +  L  + D
Sbjct: 264 PGFSTLSLADQMSLLQSAWMEILILGVVYRSL--SFEDELVYADDYIMDEDQSKLAGLLD 321

Query: 642 QCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS 674
               +L +  +   +++  EE++ +K + L +S
Sbjct: 322 LNNAILQLVKKYKSMKLEKEEFVTLKAIALANS 354


>gi|45545427 estrogen-related receptor gamma isoform 2 [Homo
           sapiens]
          Length = 435

 Score =  180 bits (457), Expect = 4e-45
 Identities = 102/273 (37%), Positives = 150/273 (54%), Gaps = 4/273 (1%)

Query: 402 VSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRN 461
           V  P +         P +LCLVC D ASG HYGV +C +CK FFKR ++G   Y C   N
Sbjct: 86  VEDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATN 145

Query: 462 DCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIV 521
           +C I K RRK+C ACR+ KCL+ GM  E  +  +   G Q+    +  E S     + + 
Sbjct: 146 ECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQ 205

Query: 522 PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAI 581
           PA  P     +VS L V EPE +YA  D +VPDS  + +TTL  L  R+++  + WAK I
Sbjct: 206 PAKKPY--NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHI 263

Query: 582 PGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYD 641
           PGF  L L DQM+LLQ +WM ++   + +RS   S  + L +A D I++E +  L  + D
Sbjct: 264 PGFSTLSLADQMSLLQSAWMEILILGVVYRSL--SFEDELVYADDYIMDEDQSKLAGLLD 321

Query: 642 QCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS 674
               +L +  +   +++  EE++ +K + L +S
Sbjct: 322 LNNAILQLVKKYKSMKLEKEEFVTLKAIALANS 354


>gi|45545433 estrogen-related receptor gamma isoform 1 [Homo
           sapiens]
          Length = 458

 Score =  180 bits (457), Expect = 4e-45
 Identities = 102/273 (37%), Positives = 150/273 (54%), Gaps = 4/273 (1%)

Query: 402 VSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRN 461
           V  P +         P +LCLVC D ASG HYGV +C +CK FFKR ++G   Y C   N
Sbjct: 109 VEDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATN 168

Query: 462 DCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIV 521
           +C I K RRK+C ACR+ KCL+ GM  E  +  +   G Q+    +  E S     + + 
Sbjct: 169 ECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQ 228

Query: 522 PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAI 581
           PA  P     +VS L V EPE +YA  D +VPDS  + +TTL  L  R+++  + WAK I
Sbjct: 229 PAKKPY--NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHI 286

Query: 582 PGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYD 641
           PGF  L L DQM+LLQ +WM ++   + +RS   S  + L +A D I++E +  L  + D
Sbjct: 287 PGFSTLSLADQMSLLQSAWMEILILGVVYRSL--SFEDELVYADDYIMDEDQSKLAGLLD 344

Query: 642 QCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS 674
               +L +  +   +++  EE++ +K + L +S
Sbjct: 345 LNNAILQLVKKYKSMKLEKEEFVTLKAIALANS 377


>gi|197209821 estrogen-related receptor gamma isoform 2 [Homo
           sapiens]
          Length = 435

 Score =  180 bits (457), Expect = 4e-45
 Identities = 102/273 (37%), Positives = 150/273 (54%), Gaps = 4/273 (1%)

Query: 402 VSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRN 461
           V  P +         P +LCLVC D ASG HYGV +C +CK FFKR ++G   Y C   N
Sbjct: 86  VEDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATN 145

Query: 462 DCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIV 521
           +C I K RRK+C ACR+ KCL+ GM  E  +  +   G Q+    +  E S     + + 
Sbjct: 146 ECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQ 205

Query: 522 PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAI 581
           PA  P     +VS L V EPE +YA  D +VPDS  + +TTL  L  R+++  + WAK I
Sbjct: 206 PAKKPY--NKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAKHI 263

Query: 582 PGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYD 641
           PGF  L L DQM+LLQ +WM ++   + +RS   S  + L +A D I++E +  L  + D
Sbjct: 264 PGFSTLSLADQMSLLQSAWMEILILGVVYRSL--SFEDELVYADDYIMDEDQSKLAGLLD 321

Query: 642 QCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS 674
               +L +  +   +++  EE++ +K + L +S
Sbjct: 322 LNNAILQLVKKYKSMKLEKEEFVTLKAIALANS 354


>gi|238550159 estrogen-related receptor beta [Homo sapiens]
          Length = 508

 Score =  173 bits (438), Expect = 6e-43
 Identities = 97/258 (37%), Positives = 145/258 (56%), Gaps = 4/258 (1%)

Query: 417 PPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPAC 476
           P +LCLVC D ASG HYGV +C +CK FFKR ++G   Y C   N+C I K RRK+C AC
Sbjct: 99  PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC 158

Query: 477 RYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLL 536
           R+ KCL+ GM  E  +  +   G Q+    +  E+S     +   PA  P     +VS L
Sbjct: 159 RFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKP--LTKIVSYL 216

Query: 537 EVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLL 596
            V EP+ LYA     +P+   + +TTL  L  R+++  + WAK IPGF +L L DQM+LL
Sbjct: 217 LVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSLL 276

Query: 597 QYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRL 656
           Q +WM ++   + +RS      + L +A D I++E+   L  + +  + +L +     +L
Sbjct: 277 QSAWMEILILGIVYRSLPYD--DKLVYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKL 334

Query: 657 QVSYEEYLCMKTLLLLSS 674
           +V  EE++ +K L L +S
Sbjct: 335 KVEKEEFVTLKALALANS 352


>gi|18860920 estrogen-related receptor alpha [Homo sapiens]
          Length = 423

 Score =  167 bits (424), Expect = 3e-41
 Identities = 100/265 (37%), Positives = 141/265 (53%), Gaps = 9/265 (3%)

Query: 417 PPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPAC 476
           P +LCLVC D ASG HYGV +C +CK FFKR ++G   Y C   N+C I K RRK C AC
Sbjct: 75  PKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQAC 134

Query: 477 RYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATL---PQLTP--- 530
           R+ KCL+ GM  E  +  +   G Q+       +    PG     P  +   P+ T    
Sbjct: 135 RFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPV 194

Query: 531 -TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHL 589
             LVS L V+EPE LYA  D + PD     + TL  L  R+++  + WAK+IPGF +L L
Sbjct: 195 NALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSL 254

Query: 590 DDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYV 649
            DQM++LQ  WM ++   +  RS        L FA DL+++E+      + +    +L +
Sbjct: 255 SDQMSVLQSVWMEVLVLGVAQRSLPLQDE--LAFAEDLVLDEEGARAAGLGELGAALLQL 312

Query: 650 SSELHRLQVSYEEYLCMKTLLLLSS 674
              L  L++  EEY+ +K L L +S
Sbjct: 313 VRRLQALRLEREEYVLLKALALANS 337


>gi|170295804 estrogen receptor alpha isoform 4 [Homo sapiens]
          Length = 595

 Score =  165 bits (417), Expect = 2e-40
 Identities = 111/357 (31%), Positives = 173/357 (48%), Gaps = 37/357 (10%)

Query: 403 SSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRND 462
           S+    S    +    + C VC+D ASG HYGV +C  CK FFKR+++G ++Y+C   N 
Sbjct: 167 STNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQ 226

Query: 463 CIIDKIRRKNCPACRYRKCLQAGMN----LEARKTKKKIKGIQQATTGVSQETSENPGNK 518
           C IDK RRK+C ACR RKC + GM      + R+  + +K  +Q   G  +    + G+ 
Sbjct: 227 CTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRGEVGSAGDM 286

Query: 519 TIV---------------PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTL 563
                                L      +VS L   EP +LY+ YD + P S   +M  L
Sbjct: 287 RAANLWPSPLMIKRSKKNSLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLL 346

Query: 564 NMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCF 623
             L  R+++  + WAK +PGF +L L DQ+ LL+ +W+ ++   L WRS        L F
Sbjct: 347 TNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGK--LLF 404

Query: 624 APDLIIN-EQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS----VPKD 678
           AP+L+++  Q   +  M +    +L  SS    + +  EE++C+K+++LL+S        
Sbjct: 405 APNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSS 464

Query: 679 GLKSQE-------LFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEV 728
            LKS E       + D+I  T I  + KA +  +    Q  QR  QL  +L  +  +
Sbjct: 465 TLKSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQ----QQHQRLAQLLLILSHIRHM 517


>gi|170295802 estrogen receptor alpha isoform 3 [Homo sapiens]
          Length = 595

 Score =  165 bits (417), Expect = 2e-40
 Identities = 111/357 (31%), Positives = 173/357 (48%), Gaps = 37/357 (10%)

Query: 403 SSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRND 462
           S+    S    +    + C VC+D ASG HYGV +C  CK FFKR+++G ++Y+C   N 
Sbjct: 167 STNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQ 226

Query: 463 CIIDKIRRKNCPACRYRKCLQAGMN----LEARKTKKKIKGIQQATTGVSQETSENPGNK 518
           C IDK RRK+C ACR RKC + GM      + R+  + +K  +Q   G  +    + G+ 
Sbjct: 227 CTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRGEVGSAGDM 286

Query: 519 TIV---------------PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTL 563
                                L      +VS L   EP +LY+ YD + P S   +M  L
Sbjct: 287 RAANLWPSPLMIKRSKKNSLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLL 346

Query: 564 NMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCF 623
             L  R+++  + WAK +PGF +L L DQ+ LL+ +W+ ++   L WRS        L F
Sbjct: 347 TNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGK--LLF 404

Query: 624 APDLIIN-EQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS----VPKD 678
           AP+L+++  Q   +  M +    +L  SS    + +  EE++C+K+++LL+S        
Sbjct: 405 APNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSS 464

Query: 679 GLKSQE-------LFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEV 728
            LKS E       + D+I  T I  + KA +  +    Q  QR  QL  +L  +  +
Sbjct: 465 TLKSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQ----QQHQRLAQLLLILSHIRHM 517


>gi|170295800 estrogen receptor alpha isoform 2 [Homo sapiens]
          Length = 595

 Score =  165 bits (417), Expect = 2e-40
 Identities = 111/357 (31%), Positives = 173/357 (48%), Gaps = 37/357 (10%)

Query: 403 SSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRND 462
           S+    S    +    + C VC+D ASG HYGV +C  CK FFKR+++G ++Y+C   N 
Sbjct: 167 STNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQ 226

Query: 463 CIIDKIRRKNCPACRYRKCLQAGMN----LEARKTKKKIKGIQQATTGVSQETSENPGNK 518
           C IDK RRK+C ACR RKC + GM      + R+  + +K  +Q   G  +    + G+ 
Sbjct: 227 CTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRGEVGSAGDM 286

Query: 519 TIV---------------PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTL 563
                                L      +VS L   EP +LY+ YD + P S   +M  L
Sbjct: 287 RAANLWPSPLMIKRSKKNSLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLL 346

Query: 564 NMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCF 623
             L  R+++  + WAK +PGF +L L DQ+ LL+ +W+ ++   L WRS        L F
Sbjct: 347 TNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGK--LLF 404

Query: 624 APDLIIN-EQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS----VPKD 678
           AP+L+++  Q   +  M +    +L  SS    + +  EE++C+K+++LL+S        
Sbjct: 405 APNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSS 464

Query: 679 GLKSQE-------LFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEV 728
            LKS E       + D+I  T I  + KA +  +    Q  QR  QL  +L  +  +
Sbjct: 465 TLKSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQ----QQHQRLAQLLLILSHIRHM 517


>gi|62821794 estrogen receptor alpha isoform 1 [Homo sapiens]
          Length = 595

 Score =  165 bits (417), Expect = 2e-40
 Identities = 111/357 (31%), Positives = 173/357 (48%), Gaps = 37/357 (10%)

Query: 403 SSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRND 462
           S+    S    +    + C VC+D ASG HYGV +C  CK FFKR+++G ++Y+C   N 
Sbjct: 167 STNDKGSMAMESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQ 226

Query: 463 CIIDKIRRKNCPACRYRKCLQAGMN----LEARKTKKKIKGIQQATTGVSQETSENPGNK 518
           C IDK RRK+C ACR RKC + GM      + R+  + +K  +Q   G  +    + G+ 
Sbjct: 227 CTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRGEVGSAGDM 286

Query: 519 TIV---------------PATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTL 563
                                L      +VS L   EP +LY+ YD + P S   +M  L
Sbjct: 287 RAANLWPSPLMIKRSKKNSLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLL 346

Query: 564 NMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCF 623
             L  R+++  + WAK +PGF +L L DQ+ LL+ +W+ ++   L WRS        L F
Sbjct: 347 TNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGK--LLF 404

Query: 624 APDLIIN-EQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSS----VPKD 678
           AP+L+++  Q   +  M +    +L  SS    + +  EE++C+K+++LL+S        
Sbjct: 405 APNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSS 464

Query: 679 GLKSQE-------LFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEV 728
            LKS E       + D+I  T I  + KA +  +    Q  QR  QL  +L  +  +
Sbjct: 465 TLKSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQ----QQHQRLAQLLLILSHIRHM 517


>gi|94538328 estrogen receptor beta isoform 2 [Homo sapiens]
          Length = 495

 Score =  160 bits (406), Expect = 3e-39
 Identities = 113/367 (30%), Positives = 183/367 (49%), Gaps = 27/367 (7%)

Query: 410 STATTGPPPK----LCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCII 465
           ++  TGP  K     C VCSD ASG HYGV +C  CK FFKR+++G ++Y+C   N C I
Sbjct: 134 ASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTI 193

Query: 466 DKIRRKNCPACRYRKCLQAGM-NLEARKTKKKIKGIQQATTGVSQETSENPGNKT----- 519
           DK RRK+C ACR RKC + GM    +R+ +   + +++  +   Q        ++     
Sbjct: 194 DKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAP 253

Query: 520 -IVPATLPQLTP--TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVK 576
            +    L  L+P   +++LLE   P VL +    S P +   +M +L  L  ++++  + 
Sbjct: 254 RVRELLLDALSPEQLVLTLLEAEPPHVLIS--RPSAPFTEASMMMSLTKLADKELVHMIS 311

Query: 577 WAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIIN-EQRMT 635
           WAK IPGF  L L DQ+ LL+  WM ++   L WRS        L FAPDL+++ ++   
Sbjct: 312 WAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSI--DHPGKLIFAPDLVLDRDEGKC 369

Query: 636 LPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR----- 690
           +  + +    +L  +S    L++ ++EYLC+K ++LL+S     + + +  D  R     
Sbjct: 370 VEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHL 429

Query: 691 MTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEVVENLLNYCFQTFLDKTMSIE-- 748
           +  + +    ++ + G SSQ  Q+  +L  LL  +  V         QT     M +E  
Sbjct: 430 LNAVTDALVWVIAKSGISSQ--QQSMRLANLLMLLSHVRHARAEKASQTLTSFGMKMETL 487

Query: 749 FPEMLAE 755
            PE   E
Sbjct: 488 LPEATME 494


>gi|94538325 estrogen receptor beta isoform 2 [Homo sapiens]
          Length = 495

 Score =  160 bits (406), Expect = 3e-39
 Identities = 113/367 (30%), Positives = 183/367 (49%), Gaps = 27/367 (7%)

Query: 410 STATTGPPPK----LCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCII 465
           ++  TGP  K     C VCSD ASG HYGV +C  CK FFKR+++G ++Y+C   N C I
Sbjct: 134 ASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTI 193

Query: 466 DKIRRKNCPACRYRKCLQAGM-NLEARKTKKKIKGIQQATTGVSQETSENPGNKT----- 519
           DK RRK+C ACR RKC + GM    +R+ +   + +++  +   Q        ++     
Sbjct: 194 DKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAP 253

Query: 520 -IVPATLPQLTP--TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVK 576
            +    L  L+P   +++LLE   P VL +    S P +   +M +L  L  ++++  + 
Sbjct: 254 RVRELLLDALSPEQLVLTLLEAEPPHVLIS--RPSAPFTEASMMMSLTKLADKELVHMIS 311

Query: 577 WAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIIN-EQRMT 635
           WAK IPGF  L L DQ+ LL+  WM ++   L WRS        L FAPDL+++ ++   
Sbjct: 312 WAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSI--DHPGKLIFAPDLVLDRDEGKC 369

Query: 636 LPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR----- 690
           +  + +    +L  +S    L++ ++EYLC+K ++LL+S     + + +  D  R     
Sbjct: 370 VEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHL 429

Query: 691 MTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEVVENLLNYCFQTFLDKTMSIE-- 748
           +  + +    ++ + G SSQ  Q+  +L  LL  +  V         QT     M +E  
Sbjct: 430 LNAVTDALVWVIAKSGISSQ--QQSMRLANLLMLLSHVRHARAEKASQTLTSFGMKMETL 487

Query: 749 FPEMLAE 755
            PE   E
Sbjct: 488 LPEATME 494


>gi|10835013 estrogen receptor beta isoform 1 [Homo sapiens]
          Length = 530

 Score =  160 bits (405), Expect = 4e-39
 Identities = 110/351 (31%), Positives = 181/351 (51%), Gaps = 32/351 (9%)

Query: 410 STATTGPPPK----LCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCII 465
           ++  TGP  K     C VCSD ASG HYGV +C  CK FFKR+++G ++Y+C   N C I
Sbjct: 134 ASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTI 193

Query: 466 DKIRRKNCPACRYRKCLQAGM-NLEARKTKKKIKGIQQATTGVSQETSENPGNKT----- 519
           DK RRK+C ACR RKC + GM    +R+ +   + +++  +   Q        ++     
Sbjct: 194 DKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHCAGKAKRSGGHAP 253

Query: 520 -IVPATLPQLTP--TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVK 576
            +    L  L+P   +++LLE   P VL +    S P +   +M +L  L  ++++  + 
Sbjct: 254 RVRELLLDALSPEQLVLTLLEAEPPHVLIS--RPSAPFTEASMMMSLTKLADKELVHMIS 311

Query: 577 WAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIIN-EQRMT 635
           WAK IPGF  L L DQ+ LL+  WM ++   L WRS        L FAPDL+++ ++   
Sbjct: 312 WAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSI--DHPGKLIFAPDLVLDRDEGKC 369

Query: 636 LPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR----- 690
           +  + +    +L  +S    L++ ++EYLC+K ++LL+S     + + +  D  R     
Sbjct: 370 VEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHL 429

Query: 691 MTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEV-------VENLLN 734
           +  + +    ++ + G SSQ  Q+  +L  LL  +  V       +E+LLN
Sbjct: 430 LNAVTDALVWVIAKSGISSQ--QQSMRLANLLMLLSHVRHASNKGMEHLLN 478


>gi|5453822 nuclear receptor subfamily 4, group A, member 2 [Homo
           sapiens]
          Length = 598

 Score =  120 bits (301), Expect = 5e-27
 Identities = 104/399 (26%), Positives = 174/399 (43%), Gaps = 34/399 (8%)

Query: 340 SLSQQQDQKPIFNVIPPIPVGSENWNRCQGSGDDN-LTSLGTLNFPGRTVFSNGYSSPSM 398
           S  Q +   P+   + P P GS +    Q     N +    ++ FPG  +   G++S  +
Sbjct: 188 SSCQMRFDGPLHVPMNPEPAGSHHVVDGQTFAVPNPIRKPASMGFPGLQI---GHASQLL 244

Query: 399 RPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCA 458
              V SPPS  S +  G    LC VC D A+  HYGV TC  CK FFKR V+    Y+C 
Sbjct: 245 DTQVPSPPSRGSPSNEG----LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCL 300

Query: 459 GRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTK--KKIKGIQQATTGVSQETSENPG 516
              +C +DK RR  C  CR++KCL  GM  E  +T   K  +G   +     QE S    
Sbjct: 301 ANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSP 360

Query: 517 NKTIVPATL-------PQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGR 569
             +++ A +       P +T    S  +   P+   +G D+      + ++T     G  
Sbjct: 361 PVSLISALVRAHVDSNPAMTSLDYSRFQA-NPDYQMSGDDTQHIQQFYDLLT-----GSM 414

Query: 570 QVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLII 629
           ++I    WA+ IPGF +L   DQ  L + +++ L    L +RS       + C   + ++
Sbjct: 415 EIIRG--WAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFC---NGVV 469

Query: 630 NEQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEI 689
             +   +    +    ++  SS L  + +    + C+  L +++   + GLK  +  +E+
Sbjct: 470 LHRLQCVRGFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMVTE--RHGLKEPKRVEEL 527

Query: 690 RMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEV 728
           +   +  L   +    G  +    R   L+KLL  + E+
Sbjct: 528 QNKIVNCLKDHVTFNNGGLN----RPNYLSKLLGKLPEL 562


>gi|20070199 nuclear receptor subfamily 2, group F, member 6 [Homo
           sapiens]
          Length = 404

 Score =  119 bits (298), Expect = 1e-26
 Identities = 86/285 (30%), Positives = 127/285 (44%), Gaps = 15/285 (5%)

Query: 401 DVSSPPSSSSTATTGPPPKL-----CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNY 455
           D +SPP ++S A  G   +      C+VC D++SG HYGV TC  CK FFKR++    +Y
Sbjct: 31  DSASPPGAASDAEPGDEERPGLQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSY 90

Query: 456 LCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENP 515
            C    DC ID+  R  C  CR +KC + GM  EA +  +    +  A   V+  +   P
Sbjct: 91  TCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQRGRIPHSLPGA---VAASSGSPP 147

Query: 516 GNKTIVPATLPQLTP-----TLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNM--LGG 568
           G+     A+   L P      L++ L   EP    AG   +   +   ++   N+  L  
Sbjct: 148 GSALAAVASGGDLFPGQPVSELIAQLLRAEPYPAAAGRFGAGGGAAGAVLGIDNVCELAA 207

Query: 569 RQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLI 628
           R + + V+WA+  P F  L + DQ+ LL+ SW  L        +    +A LL  A    
Sbjct: 208 RLLFSTVEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAALPLHTAPLLAAAGLHA 267

Query: 629 INEQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLS 673
                       DQ +       +L RLQV   EY C+K + L +
Sbjct: 268 APMAAERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFT 312


>gi|27894344 nuclear receptor subfamily 4, group A, member 1 [Homo
           sapiens]
          Length = 598

 Score =  117 bits (294), Expect = 3e-26
 Identities = 145/513 (28%), Positives = 215/513 (41%), Gaps = 58/513 (11%)

Query: 216 DLLIDENCLLSPLAGEDDSFLLEGNSNE-DCKPLILPDT-KPKIKDNGDLVLSSPSNVTL 273
           DL   E    +P A    S  ++G + E D     LP T +P    +     +S S+ T 
Sbjct: 36  DLASPEAAPAAPTALPSFSTFMDGYTGEFDTFLYQLPGTVQPCSSASSSASSTSSSSATS 95

Query: 274 PQVKTEK-EDF-IELCTPGVIKQEKLGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQM 331
           P   + K EDF +  C PG +     G V    S  G++  G+  SA S    S    Q+
Sbjct: 96  PASASFKFEDFQVYGCYPGPLS----GPVDEALSSSGSDYYGSPCSAPSPSTPSFQPPQL 151

Query: 332 YHYDMNTASLSQQQ---------DQKPIFNVIPPIPVGSENWNRCQGSGDDNLTSLGTLN 382
             +D +    S  Q         +Q P  +  PP P    +++   G       S   L 
Sbjct: 152 SPWDGSFGHFSPSQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGPSPSLAQSPLKL- 209

Query: 383 FPGRTVFSNG----YSSPSMRPDVS--SP----------PSSSSTATTGPP---PKLCLV 423
           FP +     G    YS P+  P ++  SP          P +S+ A +G P      C V
Sbjct: 210 FPSQATHQLGEGESYSMPTAFPGLAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGRCAV 269

Query: 424 CSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQ 483
           C D AS  HYGV TC  CK FFKR V+    Y+C    DC +DK RR  C  CR++KCL 
Sbjct: 270 CGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLA 329

Query: 484 AGMNLEARKTKKKIKGIQ-QATTGVSQETSENPGN--KTIVPATLPQLTPTLVSLLEVIE 540
            GM  E  +T   +KG + +  +   Q    +P N   ++V A L    P+   L     
Sbjct: 330 VGMVKEVVRT-DSLKGRRGRLPSKPKQPPDASPANLLTSLVRAHLDS-GPSTAKLDYSKF 387

Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
            E++   +         +    L+  G  +VI   KWA+ IPGF  L   DQ  LL+ ++
Sbjct: 388 QELVLPHFGKEDAGDVQQFYDLLS--GSLEVIR--KWAEKIPGFAELSPADQDLLLESAF 443

Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPC---MYDQCKHMLYVSSELHRLQ 657
           + L    L +RS  +     L F   L+++     L C     D    +L  S  LH L 
Sbjct: 444 LELFILRLAYRS--KPGEGKLIFCSGLVLHR----LQCARGFGDWIDSILAFSRSLHSLL 497

Query: 658 VSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR 690
           V    + C+  L+L++   + GL+     +E++
Sbjct: 498 VDVPAFACLSALVLITD--RHGLQEPRRVEELQ 528


>gi|21361342 nuclear receptor subfamily 4, group A, member 1 [Homo
           sapiens]
          Length = 598

 Score =  117 bits (294), Expect = 3e-26
 Identities = 145/513 (28%), Positives = 215/513 (41%), Gaps = 58/513 (11%)

Query: 216 DLLIDENCLLSPLAGEDDSFLLEGNSNE-DCKPLILPDT-KPKIKDNGDLVLSSPSNVTL 273
           DL   E    +P A    S  ++G + E D     LP T +P    +     +S S+ T 
Sbjct: 36  DLASPEAAPAAPTALPSFSTFMDGYTGEFDTFLYQLPGTVQPCSSASSSASSTSSSSATS 95

Query: 274 PQVKTEK-EDF-IELCTPGVIKQEKLGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQM 331
           P   + K EDF +  C PG +     G V    S  G++  G+  SA S    S    Q+
Sbjct: 96  PASASFKFEDFQVYGCYPGPLS----GPVDEALSSSGSDYYGSPCSAPSPSTPSFQPPQL 151

Query: 332 YHYDMNTASLSQQQ---------DQKPIFNVIPPIPVGSENWNRCQGSGDDNLTSLGTLN 382
             +D +    S  Q         +Q P  +  PP P    +++   G       S   L 
Sbjct: 152 SPWDGSFGHFSPSQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGPSPSLAQSPLKL- 209

Query: 383 FPGRTVFSNG----YSSPSMRPDVS--SP----------PSSSSTATTGPP---PKLCLV 423
           FP +     G    YS P+  P ++  SP          P +S+ A +G P      C V
Sbjct: 210 FPSQATHQLGEGESYSMPTAFPGLAPTSPHLEGSGILDTPVTSTKARSGAPGGSEGRCAV 269

Query: 424 CSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQ 483
           C D AS  HYGV TC  CK FFKR V+    Y+C    DC +DK RR  C  CR++KCL 
Sbjct: 270 CGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLA 329

Query: 484 AGMNLEARKTKKKIKGIQ-QATTGVSQETSENPGN--KTIVPATLPQLTPTLVSLLEVIE 540
            GM  E  +T   +KG + +  +   Q    +P N   ++V A L    P+   L     
Sbjct: 330 VGMVKEVVRT-DSLKGRRGRLPSKPKQPPDASPANLLTSLVRAHLDS-GPSTAKLDYSKF 387

Query: 541 PEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSW 600
            E++   +         +    L+  G  +VI   KWA+ IPGF  L   DQ  LL+ ++
Sbjct: 388 QELVLPHFGKEDAGDVQQFYDLLS--GSLEVIR--KWAEKIPGFAELSPADQDLLLESAF 443

Query: 601 MFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPC---MYDQCKHMLYVSSELHRLQ 657
           + L    L +RS  +     L F   L+++     L C     D    +L  S  LH L 
Sbjct: 444 LELFILRLAYRS--KPGEGKLIFCSGLVLHR----LQCARGFGDWIDSILAFSRSLHSLL 497

Query: 658 VSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR 690
           V    + C+  L+L++   + GL+     +E++
Sbjct: 498 VDVPAFACLSALVLITD--RHGLQEPRRVEELQ 528


>gi|4506755 retinoid X receptor, alpha [Homo sapiens]
          Length = 462

 Score =  116 bits (291), Expect = 7e-26
 Identities = 105/392 (26%), Positives = 170/392 (43%), Gaps = 43/392 (10%)

Query: 316 MSAISVH-----GVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVGSENWNRCQGS 370
           M+A S+H     G+ + G    H  ++T S        PI  + PP  V S       G 
Sbjct: 28  MAAPSLHPSLGPGIGSPG--QLHSPISTLS-------SPINGMGPPFSVISSP----MGP 74

Query: 371 GDDNLTSLGTLNFP-GRTVFSNGYSSPSMRPDVSSP---------PSSSSTATTGPPPKL 420
              ++ +  TL F  G    S+  +  S   D+  P         P+  S         +
Sbjct: 75  HSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHI 134

Query: 421 CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRK 480
           C +C D +SG HYGV +C  CK FFKR V     Y C    DC+IDK +R  C  CRY+K
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQK 194

Query: 481 CLQAGMNLEA-RKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVI 539
           CL  GM  EA ++ +++ K   +     +   +E+   + I+ A L  + P   + +E  
Sbjct: 195 CLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAEL-AVEPKTETYVEA- 252

Query: 540 EPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYS 599
                  G + S P+     +T +     +Q+   V+WAK IP F  L LDDQ+ LL+  
Sbjct: 253 -----NMGLNPSSPNDP---VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAG 304

Query: 600 WMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMT-LPCMYDQCKHMLYVSSELHRLQV 658
           W  L+  +   RS       LL     +  N      +  ++D+   +  + S++  +Q+
Sbjct: 305 WNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRV--LTELVSKMRDMQM 362

Query: 659 SYEEYLCMKTLLLLSSVPKDGLKSQELFDEIR 690
              E  C++ ++L +   K GL +    + +R
Sbjct: 363 DKTELGCLRAIVLFNPDSK-GLSNPAEVEALR 393


>gi|11415052 retinoid X receptor, beta [Homo sapiens]
          Length = 533

 Score =  115 bits (288), Expect = 2e-25
 Identities = 103/400 (25%), Positives = 164/400 (41%), Gaps = 31/400 (7%)

Query: 354 IPPIPVGSENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTAT 413
           +PP P+GS         G   L       F G        S+ S+    S PP       
Sbjct: 124 MPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPV 183

Query: 414 TG-------PPP-------KLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAG 459
            G       PPP       +LC +C D +SG HYGV +C  CK FFKR +     Y C  
Sbjct: 184 LGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRD 243

Query: 460 RNDCIIDKIRRKNCPACRYRKCLQAGMNLEA-RKTKKKIKGIQQATTGVSQETSENPGNK 518
             DC +DK +R  C  CRY+KCL  GM  EA ++ +++ K       G      E P ++
Sbjct: 244 NKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDR 303

Query: 519 TIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWA 578
            +      +         + +E      G  SS  D     +T +     +Q+   V+WA
Sbjct: 304 ILEAELAVEQKSD-----QGVEGPGGTGGSGSSPNDP----VTNICQAADKQLFTLVEWA 354

Query: 579 KAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMT-LP 637
           K IP F +L LDDQ+ LL+  W  L+  +   RS       LL     +  N      + 
Sbjct: 355 KRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVG 414

Query: 638 CMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKEL 697
            ++D+   +  + S++  +++   E  C++ ++L +   K GL +    + +R      L
Sbjct: 415 AIFDRV--LTELVSKMRDMRMDKTELGCLRAIILFNPDAK-GLSNPSEVEVLREKVYASL 471

Query: 698 GKAIVKREGNSSQNWQRFYQLTKLLDSMHEVVENLLNYCF 737
            +   K++    Q   RF +L   L ++  +    L + F
Sbjct: 472 -ETYCKQKYPEQQG--RFAKLLLRLPALRSIGLKCLEHLF 508


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.131    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,073,219
Number of Sequences: 37866
Number of extensions: 1479647
Number of successful extensions: 4612
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 4263
Number of HSP's gapped (non-prelim): 282
length of query: 777
length of database: 18,247,518
effective HSP length: 110
effective length of query: 667
effective length of database: 14,082,258
effective search space: 9392866086
effective search space used: 9392866086
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.