Guide to the Human Genome
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Name: ZNF385B Sequence: fasta or formatted (471aa) NCBI GI: 63029928
Description:

zinc finger protein 385B isoform 1

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [395aa] zinc finger protein 385B isoform 2
alt prot [369aa] zinc finger protein 385B isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         44           5
 C cysteine            2.1         10           1
 D aspartate           3.0         14           1
 E glutamate           3.4         16           3
 F phenylalanine       3.4         16           1
 G glycine             5.3         25           1
 H histidine           2.8         13           1
 I isoleucine          3.6         17           1
 K lysine             10.4         49           3
 L leucine             7.9         37           2
 M methionine          2.3         11           2
 N asparagine          5.1         24           2
 P proline             9.6         45           4
 Q glutamine           4.5         21           1
 R arginine            3.4         16           2
 S serine             13.6         64           4
 T threonine           4.5         21           3
 V valine              4.7         22           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 385B isoform 1 
ZNF385B               0.818   zinc finger protein 385B isoform 2 
ZNF385B               0.776   zinc finger protein 385B isoform 3 
ZNF385D               0.475   zinc finger protein 385D 
ZNF385A               0.332   zinc finger protein 385A isoform a 
ZNF385A               0.328   zinc finger protein 385A isoform c 
ZNF385C               0.281   PREDICTED: zinc finger protein 385C 
ZNF385C               0.281   PREDICTED: zinc finger protein 385C 
ZNF385C               0.281   PREDICTED: zinc finger protein 385C 
ZNF385A               0.160   zinc finger protein 385A isoform b 
ZMAT4                 0.044   zinc finger, matrin type 4 isoform a 
ZMAT3                 0.040   p53 target zinc finger protein isoform 1 
ZMAT3                 0.039   p53 target zinc finger protein isoform 2 
ZFR                   0.031   zinc finger RNA binding protein 
ZNF346                0.028   zinc finger protein 346 
ZMAT4                 0.025   zinc finger, matrin type 4 isoform b 
ZMAT1                 0.023   zinc finger, matrin type 1 isoform 1 
ZFHX2                 0.022   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.022   PREDICTED: zinc finger homeobox 2 
SNRPC                 0.021   small nuclear ribonucleoprotein polypeptide C 
LOC100129566          0.021   PREDICTED: hypothetical protein LOC100129566 
LOC100129566          0.021   PREDICTED: hypothetical protein LOC100129566 
ABL2                  0.020   arg tyrosine kinase isoform c 
ABL2                  0.020   arg tyrosine kinase isoform b 
ABL2                  0.020   arg tyrosine kinase isoform d 
ABL2                  0.020   arg tyrosine kinase isoform a 
ZFHX2                 0.020   PREDICTED: zinc finger homeobox 2 
SALL3                 0.020   sal-like 3 
LOC100129566          0.020   PREDICTED: hypothetical protein LOC100129566 
ZFR2                  0.019   zinc finger RNA binding protein 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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