Guide to the Human Genome
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Name: ABL2 Sequence: fasta or formatted (1182aa) NCBI GI: 6382062
Description:

arg tyrosine kinase isoform b

Referenced in:

Retroviral Oncogene Homologs
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [1146aa] arg tyrosine kinase isoform a
alt prot [1167aa] arg tyrosine kinase isoform c
alt prot [1064aa] arg tyrosine kinase isoform d
alt prot [542aa] arg tyrosine kinase isoform e
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         98           3
 C cysteine            1.5         18           1
 D aspartate           4.1         48           2
 E glutamate           6.9         82           2
 F phenylalanine       2.9         34           2
 G glycine             8.2         97           6
 H histidine           2.2         26           3
 I isoleucine          2.9         34           1
 K lysine              6.3         75           2
 L leucine             8.5        100           2
 M methionine          1.9         23           1
 N asparagine          3.6         42           2
 P proline             7.9         93           5
 Q glutamine           3.8         45           2
 R arginine            5.2         61           3
 S serine              9.5        112           4
 T threonine           6.3         74           2
 V valine              6.3         74           2
 W tryptophan          1.1         13           1
 Y tyrosine            2.8         33           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arg tyrosine kinase isoform b 
ABL2                  0.955   arg tyrosine kinase isoform c 
ABL2                  0.936   arg tyrosine kinase isoform a 
ABL2                  0.537   arg tyrosine kinase isoform d 
ABL1                  0.447   c-abl oncogene 1, receptor tyrosine kinase isoform b...
ABL1                  0.446   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL2                  0.445   arg tyrosine kinase isoform e 
FYN                   0.146   protein-tyrosine kinase fyn isoform b 
FRK                   0.146   fyn-related kinase 
FYN                   0.145   protein-tyrosine kinase fyn isoform a 
YES1                  0.145   viral oncogene yes-1 homolog 1 
FGR                   0.143   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.143   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.143   proto-oncogene tyrosine-protein kinase FGR 
SRC                   0.141   proto-oncogene tyrosine-protein kinase SRC 
SRC                   0.141   proto-oncogene tyrosine-protein kinase SRC 
LCK                   0.141   lymphocyte-specific protein tyrosine kinase precurs...
LCK                   0.141   lymphocyte-specific protein tyrosine kinase precurs...
HCK                   0.140   hemopoietic cell kinase isoform p61HCK 
LYN                   0.137   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog ...
LYN                   0.136   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is...
BLK                   0.135   B lymphoid tyrosine kinase 
TEC                   0.130   tec protein tyrosine kinase 
BTK                   0.129   Bruton agammaglobulinemia tyrosine kinase 
TXK                   0.126   TXK tyrosine kinase 
CSK                   0.123   c-src tyrosine kinase 
CSK                   0.123   c-src tyrosine kinase 
SRMS                  0.118   src-related kinase lacking C-terminal regulatory tyr...
ITK                   0.118   IL2-inducible T-cell kinase 
FYN                   0.114   protein-tyrosine kinase fyn isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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