Guide to the Human Genome
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Name: ZNF346 Sequence: fasta or formatted (294aa) NCBI GI: 6912440
Description:

zinc finger protein 346

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         24           2
 C cysteine            3.7         11           2
 D aspartate           4.4         13           1
 E glutamate           5.8         17           2
 F phenylalanine       2.4          7           1
 G glycine             5.4         16           2
 H histidine           4.1         12           1
 I isoleucine          3.1          9           1
 K lysine             10.5         31           2
 L leucine             7.1         21           2
 M methionine          2.7          8           1
 N asparagine          3.4         10           1
 P proline             5.1         15           1
 Q glutamine           8.2         24           2
 R arginine            4.4         13           2
 S serine              7.5         22           3
 T threonine           5.1         15           2
 V valine              5.4         16           2
 W tryptophan          0.3          1           1
 Y tyrosine            3.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 346 
ZMAT4                 0.254   zinc finger, matrin type 4 isoform a 
ZMAT4                 0.155   zinc finger, matrin type 4 isoform b 
ZMAT1                 0.130   zinc finger, matrin type 1 isoform 1 
ZMAT3                 0.071   p53 target zinc finger protein isoform 1 
ZMAT3                 0.071   p53 target zinc finger protein isoform 2 
ZNF385D               0.052   zinc finger protein 385D 
ZNF385B               0.043   zinc finger protein 385B isoform 3 
ZNF385B               0.043   zinc finger protein 385B isoform 2 
ZNF385B               0.043   zinc finger protein 385B isoform 1 
ZNF385A               0.029   zinc finger protein 385A isoform b 
ZNF385A               0.029   zinc finger protein 385A isoform a 
ZNF385A               0.029   zinc finger protein 385A isoform c 
ZFR                   0.024   zinc finger RNA binding protein 
GZF1                  0.024   GDNF-inducible zinc finger protein 1 
ZFX                   0.024   zinc finger protein, X-linked 
ZNF407                0.022   zinc finger protein 407 isoform 3 
ZNF407                0.022   zinc finger protein 407 isoform 2 
ZFHX2                 0.022   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.022   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.022   PREDICTED: zinc finger homeobox 2 
ZNF407                0.022   zinc finger protein 407 isoform 1 
ZFR2                  0.022   zinc finger RNA binding protein 2 isoform 1 
ZNF318                0.022   zinc finger protein 318 
DNAJC21               0.022   DnaJ homology subfamily A member 5 isoform 1 
DNAJC21               0.022   DnaJ homology subfamily A member 5 isoform 2 
ZFY                   0.021   zinc finger protein, Y-linked isoform 1 
ZFY                   0.021   zinc finger protein, Y-linked isoform 3 
ZFY                   0.021   zinc finger protein, Y-linked isoform 2 
ZFHX4                 0.021   zinc finger homeodomain 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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