BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|62868210 GIY-YIG domain containing 1 isoform 2 [Homo sapiens] (161 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|62868210 GIY-YIG domain containing 1 isoform 2 [Homo sapiens] 350 3e-97 gi|30089945 GIY-YIG domain containing 2 isoform 2 [Homo sapiens] 350 3e-97 gi|62868208 GIY-YIG domain containing 1 isoform 1 [Homo sapiens] 184 4e-47 gi|13129004 GIY-YIG domain containing 2 isoform 1 [Homo sapiens] 184 4e-47 gi|110349756 zygin 2 isoform 2 [Homo sapiens] 31 0.40 gi|110349754 zygin 2 isoform 1 [Homo sapiens] 31 0.40 gi|11545839 protease, serine, 22 [Homo sapiens] 30 0.69 gi|239748932 PREDICTED: hypothetical protein XP_002346861 [Homo ... 30 1.2 gi|239742954 PREDICTED: hypothetical protein XP_002342704 [Homo ... 30 1.2 gi|10190664 twisted gastrulation [Homo sapiens] 30 1.2 gi|169212006 PREDICTED: similar to hCG1816473 [Homo sapiens] 28 2.6 gi|188536004 zinc finger protein 469 [Homo sapiens] 28 2.6 gi|124249392 DNL-type zinc finger [Homo sapiens] 28 3.4 gi|194018748 CD6 molecule [Homo sapiens] 28 4.5 gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens] 28 4.5 gi|14150005 zinc and ring finger protein 1 [Homo sapiens] 28 4.5 gi|7662168 suppression of tumorigenicity 18 [Homo sapiens] 27 5.8 gi|169211572 PREDICTED: similar to hCG1816473 [Homo sapiens] 27 7.6 gi|239754431 PREDICTED: hypothetical protein [Homo sapiens] 27 7.6 gi|169211191 PREDICTED: similar to hCG1816473 [Homo sapiens] 27 7.6 gi|38348414 von Willebrand factor C domain containing 2 [Homo sa... 27 7.6 gi|22027612 TNF receptor-associated factor 2 [Homo sapiens] 27 9.9 gi|239755499 PREDICTED: hypothetical protein [Homo sapiens] 27 9.9 gi|239750031 PREDICTED: hypothetical protein [Homo sapiens] 27 9.9 gi|239744342 PREDICTED: hypothetical protein XP_002343123 [Homo ... 27 9.9 >gi|62868210 GIY-YIG domain containing 1 isoform 2 [Homo sapiens] Length = 161 Score = 350 bits (898), Expect = 3e-97 Identities = 161/161 (100%), Positives = 161/161 (100%) Query: 1 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR 60 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR Sbjct: 1 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR 60 Query: 61 GPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQ 120 GPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQ Sbjct: 61 GPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQ 120 Query: 121 CPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET 161 CPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET Sbjct: 121 CPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET 161 >gi|30089945 GIY-YIG domain containing 2 isoform 2 [Homo sapiens] Length = 161 Score = 350 bits (898), Expect = 3e-97 Identities = 161/161 (100%), Positives = 161/161 (100%) Query: 1 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR 60 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR Sbjct: 1 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR 60 Query: 61 GPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQ 120 GPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQ Sbjct: 61 GPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQ 120 Query: 121 CPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET 161 CPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET Sbjct: 121 CPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET 161 >gi|62868208 GIY-YIG domain containing 1 isoform 1 [Homo sapiens] Length = 275 Score = 184 bits (466), Expect = 4e-47 Identities = 81/83 (97%), Positives = 83/83 (100%) Query: 79 LRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQ 138 ++DEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQ Sbjct: 193 IQDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQ 252 Query: 139 MDTEKEVEDSELEEAHWTDLLET 161 MDTEKEVEDSELEEAHWTDLLET Sbjct: 253 MDTEKEVEDSELEEAHWTDLLET 275 Score = 172 bits (437), Expect = 9e-44 Identities = 81/82 (98%), Positives = 81/82 (98%) Query: 1 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR 60 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR Sbjct: 1 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR 60 Query: 61 GPWEMVLVVHGFPSSVAALRDE 82 GPWEMVLVVHGFPSSVAALR E Sbjct: 61 GPWEMVLVVHGFPSSVAALRFE 82 >gi|13129004 GIY-YIG domain containing 2 isoform 1 [Homo sapiens] Length = 275 Score = 184 bits (466), Expect = 4e-47 Identities = 81/83 (97%), Positives = 83/83 (100%) Query: 79 LRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQ 138 ++DEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQ Sbjct: 193 IQDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQ 252 Query: 139 MDTEKEVEDSELEEAHWTDLLET 161 MDTEKEVEDSELEEAHWTDLLET Sbjct: 253 MDTEKEVEDSELEEAHWTDLLET 275 Score = 172 bits (437), Expect = 9e-44 Identities = 81/82 (98%), Positives = 81/82 (98%) Query: 1 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR 60 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR Sbjct: 1 MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR 60 Query: 61 GPWEMVLVVHGFPSSVAALRDE 82 GPWEMVLVVHGFPSSVAALR E Sbjct: 61 GPWEMVLVVHGFPSSVAALRFE 82 >gi|110349756 zygin 2 isoform 2 [Homo sapiens] Length = 380 Score = 31.2 bits (69), Expect = 0.40 Identities = 27/98 (27%), Positives = 34/98 (34%), Gaps = 15/98 (15%) Query: 72 FPSSVAALRDEEGPLCCPHPGCLLRAHV----------ICLAEE-----FLQEEPGQLLP 116 F +L D+E P PG A C EE F +PG P Sbjct: 13 FQEPARSLLDQENCNASPEPGAEAGAEAGGGADGFPAPACSLEEKLSLCFRPSDPGAEPP 72 Query: 117 LEGQCPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAH 154 P E+SLL GD IW D V + + +H Sbjct: 73 RTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWKSSH 110 >gi|110349754 zygin 2 isoform 1 [Homo sapiens] Length = 353 Score = 31.2 bits (69), Expect = 0.40 Identities = 27/98 (27%), Positives = 34/98 (34%), Gaps = 15/98 (15%) Query: 72 FPSSVAALRDEEGPLCCPHPGCLLRAHV----------ICLAEE-----FLQEEPGQLLP 116 F +L D+E P PG A C EE F +PG P Sbjct: 13 FQEPARSLLDQENCNASPEPGAEAGAEAGGGADGFPAPACSLEEKLSLCFRPSDPGAEPP 72 Query: 117 LEGQCPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAH 154 P E+SLL GD IW D V + + +H Sbjct: 73 RTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWKSSH 110 >gi|11545839 protease, serine, 22 [Homo sapiens] Length = 317 Score = 30.4 bits (67), Expect = 0.69 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 55 WRTSGRGPWEMVLVVHGFPSSV--AALRDEEGPLCCPHPGCLLRAHVICLAEEFLQ-EEP 111 WR +G+GP ++ G+ A L D GPL C G L A +I E + P Sbjct: 213 WRGAGQGPITEDMLCAGYLEGERDACLGDSGGPLMCQVDGAWLLAGIISWGEGCAERNRP 272 Query: 112 GQLLPLEGQCPCCEK 126 G + L EK Sbjct: 273 GVYISLSAHRSWVEK 287 >gi|239748932 PREDICTED: hypothetical protein XP_002346861 [Homo sapiens] Length = 162 Score = 29.6 bits (65), Expect = 1.2 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%) Query: 20 YCLNPRY----RGRVYVGFTVNTARRVQQHNGGRKKGGAWR-TSGRGPWEMVLVVHG 71 +CL P +G VY F A+R+ R +GG R +GRG W L HG Sbjct: 39 HCLQPSSPETAKGAVYASFAA-AAKRMSARGRLRTRGGGERWAAGRGSWLQRLSQHG 94 >gi|239742954 PREDICTED: hypothetical protein XP_002342704 [Homo sapiens] Length = 192 Score = 29.6 bits (65), Expect = 1.2 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%) Query: 20 YCLNPRY----RGRVYVGFTVNTARRVQQHNGGRKKGGAWR-TSGRGPWEMVLVVHG 71 +CL P +G VY F A+R+ R +GG R +GRG W L HG Sbjct: 39 HCLQPSSPETAKGAVYASFAA-AAKRMSARGRLRTRGGGERWAAGRGSWLQRLSQHG 94 >gi|10190664 twisted gastrulation [Homo sapiens] Length = 223 Score = 29.6 bits (65), Expect = 1.2 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Query: 101 CLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIW 135 CL +E Q PG EG C CC++ +L +W Sbjct: 38 CLIQELCQCRPG-----EGNCSCCKECMLCLGALW 67 >gi|169212006 PREDICTED: similar to hCG1816473 [Homo sapiens] Length = 256 Score = 28.5 bits (62), Expect = 2.6 Identities = 28/88 (31%), Positives = 33/88 (37%), Gaps = 18/88 (20%) Query: 52 GGAWRTSGRGPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEP 111 GG W + G W +V V G AL+ GP P P C E P Sbjct: 80 GGTWDLNHAGSWPVVQAVPG--RCGRALQAPGGP---PLPSC-----------HPSWESP 123 Query: 112 GQLLPLEGQCPCCEKSLLWGDLIWLCQM 139 GQ LE CP C + LW LC + Sbjct: 124 GQ-GGLEA-CPTCAQGSLWLPSAGLCSL 149 >gi|188536004 zinc finger protein 469 [Homo sapiens] Length = 3925 Score = 28.5 bits (62), Expect = 2.6 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 1/87 (1%) Query: 34 FTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGFPSSVAALRDEEGPLC-CPHPG 92 F + + Q H+ GR G T+GR +E SS+ A R E L P P Sbjct: 1795 FGASPSHAAQGHSAGRAGGHLHPTAGRPGFEGNEFAPAGASSLTAPRGREAWLVPVPSPA 1854 Query: 93 CLLRAHVICLAEEFLQEEPGQLLPLEG 119 C+ H +++ P + L L G Sbjct: 1855 CVSNTHPSRRSQDPALSPPIRQLQLPG 1881 >gi|124249392 DNL-type zinc finger [Homo sapiens] Length = 178 Score = 28.1 bits (61), Expect = 3.4 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 5/39 (12%) Query: 56 RTSGRGPWEMVLVVHGFPSSVAA--LRDEEGPLCCPHPG 92 R +G G E+VL G P+S AA ++EGP P PG Sbjct: 138 RVAGEGALELVLEAAGAPTSTAAPEAGEDEGP---PSPG 173 >gi|194018748 CD6 molecule [Homo sapiens] Length = 668 Score = 27.7 bits (60), Expect = 4.5 Identities = 24/83 (28%), Positives = 29/83 (34%), Gaps = 16/83 (19%) Query: 17 YLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSG------RGPWEMVLVVH 70 YL C P G+ Y G + +H R GGA R G RG W V Sbjct: 236 YLWDC--PGLPGQHYCGHKEDAGAVCSEHQSWRLTGGADRCEGQVEVHFRGVWNTVCDSE 293 Query: 71 GFPSSVAALRDEEGPLCCPHPGC 93 +PS E + C GC Sbjct: 294 WYPS--------EAKVLCQSLGC 308 >gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens] Length = 979 Score = 27.7 bits (60), Expect = 4.5 Identities = 11/23 (47%), Positives = 17/23 (73%) Query: 131 GDLIWLCQMDTEKEVEDSELEEA 153 G++ WL Q D E+E E+ EL++A Sbjct: 792 GEVDWLQQYDMEREREEQELQQA 814 >gi|14150005 zinc and ring finger protein 1 [Homo sapiens] Length = 227 Score = 27.7 bits (60), Expect = 4.5 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 2/94 (2%) Query: 43 QQHNGGRKKGGAWRTSGRGPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGC--LLRAHVI 100 Q+ GG + G R L +H P ++ + P+C + ++ Sbjct: 104 QETGGGHHRDGMLYLGSRASLADALPLHIAPRWFSSHSGFKCPICSKSVASDEMEMHFIM 163 Query: 101 CLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLI 134 CL++ L L G+C C + LL GD I Sbjct: 164 CLSKPRLSYNDDVLTKDAGECVICLEELLQGDTI 197 >gi|7662168 suppression of tumorigenicity 18 [Homo sapiens] Length = 1047 Score = 27.3 bits (59), Expect = 5.8 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 16/56 (28%) Query: 83 EGPLCCPHPGCLLRAHV--------------ICLAEEF-LQEEPGQL-LPLEGQCP 122 E L CP PGC R HV I AE+ + ++ QL P GQCP Sbjct: 407 ENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPQTGQCP 462 >gi|169211572 PREDICTED: similar to hCG1816473 [Homo sapiens] Length = 256 Score = 26.9 bits (58), Expect = 7.6 Identities = 26/88 (29%), Positives = 31/88 (35%), Gaps = 18/88 (20%) Query: 52 GGAWRTSGRGPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEP 111 GG W + G W +V V G R + P P P C E P Sbjct: 80 GGTWDLNHAGSWPVVQAVPG-----RCGRAPQAPGGPPLPSC-----------HPSWESP 123 Query: 112 GQLLPLEGQCPCCEKSLLWGDLIWLCQM 139 GQ LE CP C + LW LC + Sbjct: 124 GQ-GGLEA-CPTCAQGSLWLPSAGLCSL 149 >gi|239754431 PREDICTED: hypothetical protein [Homo sapiens] Length = 134 Score = 26.9 bits (58), Expect = 7.6 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Query: 20 YCLNPRY----RGRVYVGFTVNTARRVQQHNGGRKKGGAWR-TSGRGPWEMVLV 68 +CL P +G VY F A+R+ R +GG R +GRG W L+ Sbjct: 39 HCLQPSSPETAKGAVYASFAA-AAKRMSARGRLRTRGGGERWAAGRGSWLQRLI 91 >gi|169211191 PREDICTED: similar to hCG1816473 [Homo sapiens] Length = 256 Score = 26.9 bits (58), Expect = 7.6 Identities = 26/88 (29%), Positives = 31/88 (35%), Gaps = 18/88 (20%) Query: 52 GGAWRTSGRGPWEMVLVVHGFPSSVAALRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEP 111 GG W + G W +V V G R + P P P C E P Sbjct: 80 GGTWDLNHAGSWPVVQAVPG-----RCGRAPQAPGGPPLPSC-----------HPSWESP 123 Query: 112 GQLLPLEGQCPCCEKSLLWGDLIWLCQM 139 GQ LE CP C + LW LC + Sbjct: 124 GQ-GGLEA-CPTCAQGSLWLPSAGLCSL 149 >gi|38348414 von Willebrand factor C domain containing 2 [Homo sapiens] Length = 325 Score = 26.9 bits (58), Expect = 7.6 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 6/28 (21%) Query: 73 PSSVAALRDEEGPLC----CP--HPGCL 94 PS+ L EEGPLC CP HP C+ Sbjct: 173 PSACPCLCTEEGPLCAQPECPRLHPRCI 200 >gi|22027612 TNF receptor-associated factor 2 [Homo sapiens] Length = 501 Score = 26.6 bits (57), Expect = 9.9 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 72 FPSSVAALRDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWG 131 FP + A E P CP GC + + +E+ G+ + +CP C+ + G Sbjct: 91 FPDNAARREVESLPAVCPSDGCTWKGTL----KEYESCHEGRCPLMLTECPACKGLVRLG 146 Query: 132 D 132 + Sbjct: 147 E 147 >gi|239755499 PREDICTED: hypothetical protein [Homo sapiens] Length = 516 Score = 26.6 bits (57), Expect = 9.9 Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 4/49 (8%) Query: 88 CPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWL 136 CPH CLL + E L G +LP Q C WGD WL Sbjct: 338 CPHLQCLLCLVGLVQLEPLLDLLLGLVLPHPPQALC----PTWGDPWWL 382 >gi|239750031 PREDICTED: hypothetical protein [Homo sapiens] Length = 356 Score = 26.6 bits (57), Expect = 9.9 Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 4/49 (8%) Query: 88 CPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWL 136 CPH CLL + E L G +LP Q C WGD WL Sbjct: 178 CPHLQCLLCLVGLVQLEPLLDLLLGLVLPHPPQALC----PTWGDPWWL 222 >gi|239744342 PREDICTED: hypothetical protein XP_002343123 [Homo sapiens] Length = 356 Score = 26.6 bits (57), Expect = 9.9 Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 4/49 (8%) Query: 88 CPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWL 136 CPH CLL + E L G +LP Q C WGD WL Sbjct: 178 CPHLQCLLCLVGLVQLEPLLDLLLGLVLPHPPQALC----PTWGDPWWL 222 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.323 0.142 0.481 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,840,455 Number of Sequences: 37866 Number of extensions: 394097 Number of successful extensions: 766 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 753 Number of HSP's gapped (non-prelim): 31 length of query: 161 length of database: 18,247,518 effective HSP length: 94 effective length of query: 67 effective length of database: 14,688,114 effective search space: 984103638 effective search space used: 984103638 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.