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Search of human proteins with 61175224
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61175224 adenosine deaminase-like isoform 2 [Homo sapiens]
(267 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61175224 adenosine deaminase-like isoform 2 [Homo sapiens] 528 e-150
gi|226693318 adenosine deaminase-like isoform 1 [Homo sapiens] 442 e-124
gi|47078295 adenosine deaminase [Homo sapiens] 59 6e-09
gi|29029550 cat eye syndrome critical region protein 1 isoform a... 37 0.014
gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens] 32 0.44
gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens] 32 0.44
gi|41281907 StAR-related lipid transfer (START) domain containin... 32 0.44
gi|16445031 StAR-related lipid transfer (START) domain containin... 32 0.44
gi|41281898 StAR-related lipid transfer (START) domain containin... 32 0.44
gi|119943086 Tax1 (human T-cell leukemia virus type I) binding p... 32 0.44
gi|21361682 Tax1 (human T-cell leukemia virus type I) binding pr... 32 0.44
gi|148792970 TAF4b RNA polymerase II, TATA box binding protein (... 32 0.58
gi|34996489 pleckstrin homology domain interacting protein [Homo... 32 0.76
gi|62912476 lethal giant larvae homolog 1 [Homo sapiens] 32 0.76
gi|224451082 cytospin A [Homo sapiens] 30 2.9
gi|224451080 cytospin A [Homo sapiens] 30 2.9
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 29 3.8
gi|21450759 adenylate kinase domain containing 1 isoform 2 [Homo... 29 3.8
gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens] 29 3.8
gi|237858670 hypothetical protein LOC123207 isoform e [Homo sapi... 29 4.9
gi|54633315 deoxynucleotidyltransferase, terminal, interacting p... 28 6.4
gi|4758462 glypican 3 [Homo sapiens] 28 6.4
>gi|61175224 adenosine deaminase-like isoform 2 [Homo sapiens]
Length = 267
Score = 528 bits (1360), Expect = e-150
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MIEAEEQQPCKTDFYSELPKVELHAHLNGSISSHTMKKLIAQKPDLKIHDQMTVIDKGKK 60
MIEAEEQQPCKTDFYSELPKVELHAHLNGSISSHTMKKLIAQKPDLKIHDQMTVIDKGKK
Sbjct: 1 MIEAEEQQPCKTDFYSELPKVELHAHLNGSISSHTMKKLIAQKPDLKIHDQMTVIDKGKK 60
Query: 61 RTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFADDGVKYLELRSTPRRENATGMTKKT 120
RTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFADDGVKYLELRSTPRRENATGMTKKT
Sbjct: 61 RTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFADDGVKYLELRSTPRRENATGMTKKT 120
Query: 121 YVESILEGIKQSKQENLDIDVRYLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLS 180
YVESILEGIKQSKQENLDIDVRYLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLS
Sbjct: 121 YVESILEGIKQSKQENLDIDVRYLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLS 180
Query: 181 GDPTVGQAKDFLEPLLEAKKAGLKLALHLSEIPNQKKETQILLDLLPDRIGHGTFLNSGE 240
GDPTVGQAKDFLEPLLEAKKAGLKLALHLSEIPNQKKETQILLDLLPDRIGHGTFLNSGE
Sbjct: 181 GDPTVGQAKDFLEPLLEAKKAGLKLALHLSEIPNQKKETQILLDLLPDRIGHGTFLNSGE 240
Query: 241 GGSLDLVDFVRQHRIPLGKAWSFRSSR 267
GGSLDLVDFVRQHRIPLGKAWSFRSSR
Sbjct: 241 GGSLDLVDFVRQHRIPLGKAWSFRSSR 267
>gi|226693318 adenosine deaminase-like isoform 1 [Homo sapiens]
Length = 328
Score = 442 bits (1137), Expect = e-124
Identities = 230/257 (89%), Positives = 230/257 (89%), Gaps = 27/257 (10%)
Query: 1 MIEAEEQQPCKTDFYSELPKVELHAHLNGSISSHTMKKLIAQKPDLKIHDQMTVIDKGKK 60
MIEAEEQQPCKTDFYSELPKVELHAHLNGSISSHTMKKLIAQKPDLKIHDQMTVIDKGKK
Sbjct: 1 MIEAEEQQPCKTDFYSELPKVELHAHLNGSISSHTMKKLIAQKPDLKIHDQMTVIDKGKK 60
Query: 61 RTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFADDGVKYLELRSTPRRENATGMTKKT 120
RTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFADDGVKYLELRSTPRRENATGMTKKT
Sbjct: 61 RTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFADDGVKYLELRSTPRRENATGMTKKT 120
Query: 121 YVESILEGIKQSKQENLDIDVRYLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLS 180
YVESILEGIKQSKQENLDIDVRYLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLS
Sbjct: 121 YVESILEGIKQSKQENLDIDVRYLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLS 180
Query: 181 GDPTVGQAKDFLEPLLEAKKAGLKLALHLSEIPNQKKETQILLDLLPDRIGHGTFLNSGE 240
GDPT IPNQKKETQILLDLLPDRIGHGTFLNSGE
Sbjct: 181 GDPT---------------------------IPNQKKETQILLDLLPDRIGHGTFLNSGE 213
Query: 241 GGSLDLVDFVRQHRIPL 257
GGSLDLVDFVRQHRIPL
Sbjct: 214 GGSLDLVDFVRQHRIPL 230
>gi|47078295 adenosine deaminase [Homo sapiens]
Length = 363
Score = 58.5 bits (140), Expect = 6e-09
Identities = 54/235 (22%), Positives = 107/235 (45%), Gaps = 25/235 (10%)
Query: 19 PKVELHAHLNGSISSHTM----KKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQ-TI 73
PKVELH HL+GSI T+ ++ P + VI K TL + F +
Sbjct: 10 PKVELHVHLDGSIKPETILYYGRRRGIALPANTAEGLLNVIGMDKPLTLPDFLAKFDYYM 69
Query: 74 HQLTSSPEDILMVTKDVIKEFADDGVKYLELRSTPR------------RENATGMTKKTY 121
+ E I + + ++ A +GV Y+E+R +P + +T
Sbjct: 70 PAIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEV 129
Query: 122 VESILEGIKQSKQENLDIDVRYLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLSG 181
V + +G+++ +++ + R ++ R P + + V+L +++ + TV+ +DL+G
Sbjct: 130 VALVGQGLQEGERD-FGVKARSILCC-MRHQPNWSPKVVELCKKY---QQQTVVAIDLAG 184
Query: 182 DPTVGQAK---DFLEPLLEAKKAGLKLALHLSEIPNQKKETQILLDLLPDRIGHG 233
D T+ + ++ EA K+G+ +H E+ + + + + L +R+GHG
Sbjct: 185 DETIPGSSLLPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDILKTERLGHG 239
>gi|29029550 cat eye syndrome critical region protein 1 isoform a
precursor [Homo sapiens]
Length = 511
Score = 37.4 bits (85), Expect = 0.014
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 33/217 (15%)
Query: 39 LIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDVI----KEF 94
L+ Q P++ +Q V K F+TI S V +D + +EF
Sbjct: 188 LVTQHPEVIYTNQNVVWSK------------FETIFFTISGLIHYAPVFRDYVFRSMQEF 235
Query: 95 ADDGVKYLELRS-------TPRRENATGMTKKTYVESILEGIKQSKQENLDIDVRYLIAV 147
+D V Y+E+R+ + + KTY E + + ++ E + I + Y +
Sbjct: 236 YEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQE-VAQKFVETHPEFIGIKIIY--SD 292
Query: 148 DRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLSGDPTVGQA-KDFLEPLLEAKKAGLKLA 206
R V E++++A + V G DL G G + D+ E L+ K G+KL
Sbjct: 293 HRSKDVAVIAESIRMAMGLRIKFPTVVAGFDLVGHEDTGHSLHDYKEALMIPAKDGVKLP 352
Query: 207 LHLSEIPNQKKETQI---LLDLL---PDRIGHGTFLN 237
+ T I +LD L RIGHG L+
Sbjct: 353 YFFHAGETDWQGTSIDRNILDALMLNTTRIGHGFALS 389
>gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens]
Length = 284
Score = 32.3 bits (72), Expect = 0.44
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 37 KKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDVIKE--- 93
+KL+ + DL+ ++ + +G+ R LEE ++ + + ED +D +E
Sbjct: 167 RKLVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIK 226
Query: 94 FADDGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQENLDI 139
D +K E R+ + T + K ++ + E + +K+ENL +
Sbjct: 227 VLSDKLKEAETRAEFAERSVTKLEKS--IDDLEEKVAHAKEENLSM 270
>gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]
Length = 284
Score = 32.3 bits (72), Expect = 0.44
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 37 KKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDVIKE--- 93
+KL+ + DL+ ++ + +G+ R LEE ++ + + ED +D +E
Sbjct: 167 RKLVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIK 226
Query: 94 FADDGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQENLDI 139
D +K E R+ + T + K ++ + E + +K+ENL +
Sbjct: 227 VLSDKLKEAETRAEFAERSVTKLEKS--IDDLEEKVAHAKEENLSM 270
>gi|41281907 StAR-related lipid transfer (START) domain containing
13 isoform beta [Homo sapiens]
Length = 1105
Score = 32.3 bits (72), Expect = 0.44
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 37 KKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFAD 96
KK KPD K ++ +G + EC ++F+ H+L + + + A+
Sbjct: 827 KKYATGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVE--------AE 878
Query: 97 DGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQE 135
V LE T E +G T TY+ +++G+++ +E
Sbjct: 879 IHVPTLEELGTQLEE--SGATFHTYLNHLIQGLQKEAKE 915
>gi|16445031 StAR-related lipid transfer (START) domain containing
13 isoform gamma [Homo sapiens]
Length = 995
Score = 32.3 bits (72), Expect = 0.44
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 37 KKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFAD 96
KK KPD K ++ +G + EC ++F+ H+L + + + A+
Sbjct: 717 KKYATGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVE--------AE 768
Query: 97 DGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQE 135
V LE T E +G T TY+ +++G+++ +E
Sbjct: 769 IHVPTLEELGTQLEE--SGATFHTYLNHLIQGLQKEAKE 805
>gi|41281898 StAR-related lipid transfer (START) domain containing
13 isoform alpha [Homo sapiens]
Length = 1113
Score = 32.3 bits (72), Expect = 0.44
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 37 KKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFAD 96
KK KPD K ++ +G + EC ++F+ H+L + + + A+
Sbjct: 835 KKYATGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVE--------AE 886
Query: 97 DGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQE 135
V LE T E +G T TY+ +++G+++ +E
Sbjct: 887 IHVPTLEELGTQLEE--SGATFHTYLNHLIQGLQKEAKE 923
>gi|119943086 Tax1 (human T-cell leukemia virus type I) binding
protein 1 isoform b [Homo sapiens]
Length = 747
Score = 32.3 bits (72), Expect = 0.44
Identities = 29/155 (18%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 38 KLIA--QKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFA 95
KLIA +K ++ +Q+ +++ E C Q+ LT + + M ++ K F+
Sbjct: 166 KLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTEVTQSLKMENEEFKKRFS 225
Query: 96 DDGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQENLDIDVRYLIAVDRRGGPLV 155
D K +L + K+T ++S+ + +K+++ E ++ + D + V
Sbjct: 226 DATSKAHQLEEDIVSVTHKAIEKETELDSLKDKLKKAQHEREQLECQLKTEKDEKELYKV 285
Query: 156 AKETVKLAEEFFLSTEGTVLGLDLSGDPTVGQAKD 190
+ ++ +S T+ LD + + + K+
Sbjct: 286 HLKNTEIENTKLMSEVQTLKNLDGNKESVITHFKE 320
>gi|21361682 Tax1 (human T-cell leukemia virus type I) binding
protein 1 isoform a [Homo sapiens]
Length = 789
Score = 32.3 bits (72), Expect = 0.44
Identities = 29/155 (18%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 38 KLIA--QKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFA 95
KLIA +K ++ +Q+ +++ E C Q+ LT + + M ++ K F+
Sbjct: 166 KLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTEVTQSLKMENEEFKKRFS 225
Query: 96 DDGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQENLDIDVRYLIAVDRRGGPLV 155
D K +L + K+T ++S+ + +K+++ E ++ + D + V
Sbjct: 226 DATSKAHQLEEDIVSVTHKAIEKETELDSLKDKLKKAQHEREQLECQLKTEKDEKELYKV 285
Query: 156 AKETVKLAEEFFLSTEGTVLGLDLSGDPTVGQAKD 190
+ ++ +S T+ LD + + + K+
Sbjct: 286 HLKNTEIENTKLMSEVQTLKNLDGNKESVITHFKE 320
>gi|148792970 TAF4b RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 105kDa [Homo sapiens]
Length = 862
Score = 32.0 bits (71), Expect = 0.58
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 36 MKKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFA 95
+K+L+ Q+P Q+T I T+++C Q ++ + + + ++K+
Sbjct: 527 VKQLVVQQPSGGNEKQVTTISHSSTLTIQKCGQKTMPVNTIIPTSQ---FPPASILKQIT 583
Query: 96 DDGVKYLELRSTPRREN 112
G K L L+++P ++N
Sbjct: 584 LPGNKILSLQASPTQKN 600
>gi|34996489 pleckstrin homology domain interacting protein [Homo
sapiens]
Length = 1821
Score = 31.6 bits (70), Expect = 0.76
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Query: 27 LNGSISSHTMKKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMV 86
L+ H L K L+ H + T+ + KKR SSPE +
Sbjct: 1410 LSAFFEEHISSVLSDYKSALRFHKRNTITKRRKKRNRSSSVSS-----SAASSPERKKRI 1464
Query: 87 TKDVIKEFADDGVKYLELRSTPRRENATGMTKKTYVESIL 126
K +K + RS P R NA + KT S++
Sbjct: 1465 LKPQLKSESSTSAFSTPTRSIPPRHNAAQINGKTESSSVV 1504
>gi|62912476 lethal giant larvae homolog 1 [Homo sapiens]
Length = 1064
Score = 31.6 bits (70), Expect = 0.76
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 180 SGDPTVGQAK----DFLEPLLEAKKAGLKLALHLSEIPNQKKETQILLDLLPDRIG 231
S DP +G K + ++ A AG L L LS++P ++ + ++DLL DR G
Sbjct: 510 SDDPRLGVQKVALCKYTAQMVVAGTAGQVLVLELSDVPVEQAVSVAIIDLLQDREG 565
>gi|224451082 cytospin A [Homo sapiens]
Length = 1117
Score = 29.6 bits (65), Expect = 2.9
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 21 VELHAHLNGSISSHTMKKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSP 80
V+LH +L S +T+KKL QK HD I +R EE + Q +
Sbjct: 703 VKLHDNLIISDLENTVKKLQDQK-----HDMEREIKTLHRRLREESAEW----RQFQADL 753
Query: 81 EDILMVTKDVIKEFADDGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQENLDID 140
+ +++ D IK A + + L+ R +E +TK+ LE IK KQE
Sbjct: 754 QTAVVIAND-IKSEAQEEIGDLKRRLHEAQEKNEKLTKE------LEEIKSRKQEEERGR 806
Query: 141 V-RYLIAVDR 149
V Y+ AV+R
Sbjct: 807 VYNYMNAVER 816
>gi|224451080 cytospin A [Homo sapiens]
Length = 1117
Score = 29.6 bits (65), Expect = 2.9
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 21 VELHAHLNGSISSHTMKKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSP 80
V+LH +L S +T+KKL QK HD I +R EE + Q +
Sbjct: 703 VKLHDNLIISDLENTVKKLQDQK-----HDMEREIKTLHRRLREESAEW----RQFQADL 753
Query: 81 EDILMVTKDVIKEFADDGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQENLDID 140
+ +++ D IK A + + L+ R +E +TK+ LE IK KQE
Sbjct: 754 QTAVVIAND-IKSEAQEEIGDLKRRLHEAQEKNEKLTKE------LEEIKSRKQEEERGR 806
Query: 141 V-RYLIAVDR 149
V Y+ AV+R
Sbjct: 807 VYNYMNAVER 816
>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
sapiens]
Length = 1911
Score = 29.3 bits (64), Expect = 3.8
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 31 ISSHTMKKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDV 90
I +H KK AQK ++ + ++ + E + + +H L PED L +++
Sbjct: 181 IENHRKKKKEAQKDGKGEEEEEEEEQEEEEAFIAEMQMVAEILHHLVQRPEDYLENVENI 240
Query: 91 IKEFADDGVKYLE 103
+K + + ++ LE
Sbjct: 241 VKLYKETILQTLE 253
>gi|21450759 adenylate kinase domain containing 1 isoform 2 [Homo
sapiens]
Length = 421
Score = 29.3 bits (64), Expect = 3.8
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 31 ISSHTMKKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDV 90
I +H KK AQK ++ + ++ + E + + +H L PED L +++
Sbjct: 181 IENHRKKKKEAQKDGKGEEEEEEEEQEEEEAFIAEMQMVAEILHHLVQRPEDYLENVENI 240
Query: 91 IKEFADDGVKYLE 103
+K + + ++ LE
Sbjct: 241 VKLYKETILQTLE 253
>gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]
Length = 898
Score = 29.3 bits (64), Expect = 3.8
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 17 ELPKVELHAHLNGSISSHTMKKLIAQKPD-LKIHDQMTVIDKGKKRTLEECFQMFQTIHQ 75
E+ EL A L ++ ++K + +K D L++H + KRT +E +T+
Sbjct: 446 EIKSNELDAKLR--VTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRT 503
Query: 76 LTSSPEDILMVTKDVIKEFADDGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQ- 134
ED + T+D + KY E+ + + E + K + + E +++ KQ
Sbjct: 504 KVKCLEDERLRTEDELS-------KYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQE 556
Query: 135 -ENLDIDVRYL 144
ENL +V L
Sbjct: 557 IENLKEEVESL 567
>gi|237858670 hypothetical protein LOC123207 isoform e [Homo
sapiens]
Length = 149
Score = 28.9 bits (63), Expect = 4.9
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 104 LRSTPRRENATG-----MTKKTYVESILEGIKQSKQENLDIDVRYLIAVDRRGGPLVAKE 158
LR+TP + M KK + +G QSK+ + +AVD +G +A
Sbjct: 11 LRATPNTRGSARLLCAEMPKKAGATT--KGKSQSKEPERPLPPLGPVAVDPKGCVTIAIH 68
Query: 159 TVKLAEEFFLST-EGTVLGLDLSGDPTVGQAKD----FLEPLLEAKKAGLKLALHLSEIP 213
+++ ++ + + ++ P+ G+A +L +LE +K+ + L IP
Sbjct: 69 AKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKLCYSIP 128
Query: 214 NQKKETQILLDLLPDRIGH 232
Q +ETQ + +PD H
Sbjct: 129 QQLEETQEGVSGIPDTPCH 147
>gi|54633315 deoxynucleotidyltransferase, terminal, interacting
protein 2 [Homo sapiens]
Length = 756
Score = 28.5 bits (62), Expect = 6.4
Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 46 LKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDV--IKEFADDGVKYL- 102
L +H+Q V + K T + C + + + +T ++I + + + E D ++ L
Sbjct: 278 LTVHEQANV--ESLKETKQNCKDLDEDANGITDEGKEINEKSSQLKNLSELQDTSLQQLV 335
Query: 103 -ELRSTPRRENATGMTKKTYVESILEGIKQS 132
+ STP+ +NA + E++++ + Q+
Sbjct: 336 SQRHSTPQNKNAVSVHSNLNSEAVMKSLTQT 366
>gi|4758462 glypican 3 [Homo sapiens]
Length = 580
Score = 28.5 bits (62), Expect = 6.4
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 134 QENLDIDVR----YLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLSGDPTVGQAK 189
QE +I VR Y A+ + P + + + EFF +LG D++ D V +
Sbjct: 112 QEAFEIVVRHAKNYTNAMFKNNYPSLTPQAFEFVGEFFTDVSLYILGSDINVDDMVNELF 171
Query: 190 DFLEPLL 196
D L P++
Sbjct: 172 DSLFPVI 178
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,790,995
Number of Sequences: 37866
Number of extensions: 411858
Number of successful extensions: 1114
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1101
Number of HSP's gapped (non-prelim): 23
length of query: 267
length of database: 18,247,518
effective HSP length: 100
effective length of query: 167
effective length of database: 14,460,918
effective search space: 2414973306
effective search space used: 2414973306
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.