TPM1 34426

Name: TPM1	Sequence: fasta or formatted (284aa)		NCBI GI: 63252906
Description: tropomyosin 1 alpha chain isoform 7		Referenced in: Muscle
Other entries for this name: alt prot [284aa] tropomyosin 1 alpha chain isoform 5 alt prot [284aa] tropomyosin 1 alpha chain isoform 3 alt prot [284aa] tropomyosin 1 alpha chain isoform 1 alt prot [284aa] tropomyosin 1 alpha chain isoform 4 alt prot [284aa] tropomyosin 1 alpha chain isoform 2 alt prot [245aa] tropomyosin 1 alpha chain isoform 6
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.7 39 3 C cysteine 0.0 0 0 D aspartate 8.1 23 2 E glutamate 19.7 56 3 F phenylalanine 0.4 1 1 G glycine 0.7 2 1 H histidine 1.4 4 1 I isoleucine 4.2 12 2 K lysine 10.9 31 3 L leucine 11.6 33 2 M methionine 3.5 10 1 N asparagine 1.8 5 2 P proline 0.0 0 0 Q glutamine 5.6 16 1 R arginine 7.0 20 2 S serine 4.6 13 1 T threonine 1.8 5 1 V valine 3.9 11 1 W tryptophan 0.0 0 0 Y tyrosine 1.1 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tropomyosin 1 alpha chain isoform 7 TPM1 0.942 tropomyosin 1 alpha chain isoform 2 TPM1 0.903 tropomyosin 1 alpha chain isoform 4 TPM1 0.845 tropomyosin 1 alpha chain isoform 3 TPM1 0.813 tropomyosin 1 alpha chain isoform 5 TPM2 0.779 tropomyosin 2 (beta) isoform 2 TPM1 0.753 tropomyosin 1 alpha chain isoform 1 TPM4 0.748 tropomyosin 4 isoform 1 TPM3 0.704 tropomyosin 3 isoform 1 TPM2 0.696 tropomyosin 2 (beta) isoform 1 TPM3 0.606 tropomyosin 3 isoform 2 TPM4 0.581 tropomyosin 4 isoform 2 TPM3 0.577 tropomyosin 3 isoform 4 TPM3 0.567 tropomyosin 3 isoform 3 TPM1 0.563 tropomyosin 1 alpha chain isoform 6 TPM3 0.537 tropomyosin 3 isoform 5 TPM2 0.529 tropomyosin 2 (beta) isoform 3 MYH9 0.125 myosin, heavy polypeptide 9, non-muscle LOC645202 0.119 PREDICTED: hypothetical protein LOC645202 LOC400352 0.113 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.113 PREDICTED: similar to Putative golgin subfamily A m... LOC440243 0.113 PREDICTED: Putative golgin subfamily A member 6-lik... MYH11 0.111 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.111 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.111 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.111 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... LOC727832 0.107 golgi autoantigen, golgin subfamily a-like MYH10 0.107 myosin, heavy polypeptide 10, non-muscle PLEC1 0.103 plectin 1 isoform 11 PLEC1 0.103 plectin 1 isoform 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.