U2AF2 33871

Name: U2AF2	Sequence: fasta or formatted (475aa)		NCBI GI: 6005926
Description: U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform a		Referenced in: Capping and Splicing
Other entries for this name: alt prot [471aa] U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 27 2 C cysteine 1.3 6 1 D aspartate 6.3 30 2 E glutamate 5.9 28 2 F phenylalanine 4.2 20 2 G glycine 7.2 34 2 H histidine 1.9 9 1 I isoleucine 3.6 17 2 K lysine 5.9 28 4 L leucine 7.4 35 2 M methionine 3.4 16 2 N asparagine 4.0 19 1 P proline 6.9 33 3 Q glutamine 5.5 26 1 R arginine 8.4 40 4 S serine 6.3 30 2 T threonine 5.1 24 2 V valine 8.2 39 3 W tryptophan 0.4 2 1 Y tyrosine 2.5 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 U2 (RNU2) small nuclear RNA auxiliary factor 2 isofor... U2AF2 0.984 U2 (RNU2) small nuclear RNA auxiliary factor 2 isofo... RBM39 0.072 RNA binding motif protein 39 isoform b RBM39 0.068 RNA binding motif protein 39 isoform a RBM23 0.060 RNA binding motif protein 23 isoform 1 UHMK1 0.058 kinase interacting stathmin RBM23 0.052 RNA binding motif protein 23 isoform 2 PUF60 0.051 poly-U binding splicing factor 60KDa isoform b [Homo... SART3 0.050 squamous cell carcinoma antigen recognized by T cells... PUF60 0.049 poly-U binding splicing factor 60KDa isoform c [Hom... PUF60 0.049 poly-U binding splicing factor 60KDa isoform a [Homo... ELAVL3 0.043 ELAV-like protein 3 isoform 1 ELAVL3 0.043 ELAV-like protein 3 isoform 2 CSTF2 0.042 cleavage stimulation factor subunit 2 RBM23 0.041 RNA binding motif protein 23 isoform 3 ELAVL4 0.040 ELAV-like 4 isoform 1 ELAVL4 0.040 ELAV-like 4 isoform 5 ELAVL4 0.040 ELAV-like 4 isoform 4 ELAVL4 0.040 ELAV-like 4 isoform 3 ELAVL4 0.040 ELAV-like 4 isoform 2 ELAVL2 0.040 ELAV (embryonic lethal, abnormal vision, Drosophila... CSTF2T 0.038 cleavage stimulation factor, 3' pre-RNA, subunit 2, ... PABPC4 0.036 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.036 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.036 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... TIA1 0.035 TIA1 protein isoform 2 ZC3H18 0.034 zinc finger CCCH-type containing 18 LUC7L 0.033 LUC7-like isoform b LUC7L 0.033 LUC7-like isoform a LOC100133599 0.032 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.