Guide to the Human Genome
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Name: LUC7L Sequence: fasta or formatted (325aa) NCBI GI: 8922297
Description:

LUC7-like isoform a

Referenced in:

Capping and Splicing
Xenobiotic Pathways

Other entries for this name:
alt prot [371aa] LUC7-like isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         26           1
 C cysteine            2.2          7           2
 D aspartate           7.4         24           2
 E glutamate          10.8         35           3
 F phenylalanine       2.2          7           2
 G glycine             4.0         13           2
 H histidine           3.7         12           1
 I isoleucine          2.8          9           1
 K lysine              7.4         24           3
 L leucine             9.2         30           2
 M methionine          2.2          7           1
 N asparagine          1.5          5           1
 P proline             0.6          2           1
 Q glutamine           4.3         14           3
 R arginine           17.8         58           5
 S serine              8.6         28           2
 T threonine           3.1         10           1
 V valine              3.1         10           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   LUC7-like isoform a 
LUC7L                 1.000   LUC7-like isoform b 
LUC7L2                0.811   LUC7-like 2 
CROP                  0.292   cisplatin resistance-associated overexpressed protei...
CROP                  0.292   cisplatin resistance-associated overexpressed protei...
RSRC2                 0.094   arginine/serine-rich coiled-coil 2 isoform b 
RSRC2                 0.094   arginine/serine-rich coiled-coil 2 isoform a 
DDX46                 0.081   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
SNRNP70               0.073   U1 small nuclear ribonucleoprotein 70 kDa 
PPIG                  0.073   peptidylprolyl isomerase G 
DHX8                  0.072   DEAH (Asp-Glu-Ala-His) box polypeptide 8 
LOC100133599          0.067   PREDICTED: hypothetical protein 
PRPF38B               0.067   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
RBM25                 0.065   RNA binding motif protein 25 
LOC100133599          0.065   PREDICTED: hypothetical protein 
SON                   0.065   SON DNA-binding protein isoform F 
SON                   0.065   SON DNA-binding protein isoform B 
LOC100286959          0.064   PREDICTED: hypothetical protein XP_002343921 
ZC3H13                0.064   zinc finger CCCH-type containing 13 
SFRS6                 0.062   arginine/serine-rich splicing factor 6 
DDX23                 0.062   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
SFRS11                0.060   splicing factor, arginine/serine-rich 11 
ZRSR2                 0.060   U2 small nuclear RNA auxiliary factor 1-like 2 
PRPF38A               0.060   PRP38 pre-mRNA processing factor 38 (yeast) domain c...
TCHH                  0.060   trichohyalin 
RBM16                 0.060   RNA-binding motif protein 16 
ACIN1                 0.059   apoptotic chromatin condensation inducer 1 
NKTR                  0.059   natural killer-tumor recognition sequence 
CHERP                 0.059   calcium homeostasis endoplasmic reticulum protein [...
SFRS4                 0.057   splicing factor, arginine/serine-rich 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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