Guide to the Human Genome
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Name: ELAVL3 Sequence: fasta or formatted (367aa) NCBI GI: 49355761
Description:

ELAV-like protein 3 isoform 1

Referenced in:

RNA-binding Proteins

Other entries for this name:
alt prot [360aa] ELAV-like protein 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         31           2
 C cysteine            0.8          3           1
 D aspartate           4.4         16           2
 E glutamate           3.5         13           2
 F phenylalanine       4.4         16           1
 G glycine            10.6         39           3
 H histidine           1.1          4           2
 I isoleucine          5.7         21           2
 K lysine              6.0         22           1
 L leucine             9.5         35           2
 M methionine          2.5          9           1
 N asparagine          5.4         20           2
 P proline             4.4         16           1
 Q glutamine           5.2         19           1
 R arginine            4.4         16           2
 S serine              7.9         29           2
 T threonine           6.0         22           2
 V valine              6.0         22           1
 W tryptophan          0.5          2           1
 Y tyrosine            3.3         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ELAV-like protein 3 isoform 1 
ELAVL3                0.973   ELAV-like protein 3 isoform 2 
ELAVL4                0.794   ELAV-like 4 isoform 5 
ELAVL4                0.794   ELAV-like 4 isoform 4 
ELAVL4                0.792   ELAV-like 4 isoform 1 
ELAVL4                0.792   ELAV-like 4 isoform 2 
ELAVL4                0.792   ELAV-like 4 isoform 3 
ELAVL2                0.782   ELAV (embryonic lethal, abnormal vision, Drosophila...
ELAVL1                0.622   ELAV-like 1 
PABPC1L               0.127   poly(A)-binding protein, cytoplasmic 1-like 
PABPC4                0.122   poly A binding protein, cytoplasmic 4 isoform 3 [Ho...
PABPC4                0.122   poly A binding protein, cytoplasmic 4 isoform 2 [Homo...
PABPC4                0.122   poly A binding protein, cytoplasmic 4 isoform 1 [Ho...
PABPC1                0.121   poly(A) binding protein, cytoplasmic 1 
RBMS1                 0.121   RNA binding motif, single stranded interacting protei...
RBMS1                 0.121   RNA binding motif, single stranded interacting protei...
RBMS3                 0.114   RNA binding motif, single stranded interacting prote...
RBMS3                 0.114   RNA binding motif, single stranded interacting prote...
RBMS3                 0.114   RNA binding motif, single stranded interacting prote...
RBMS2                 0.112   RNA binding motif, single stranded interacting protei...
TIAL1                 0.105   TIA-1 related protein isoform 1 
TIA1                  0.104   TIA1 protein isoform 1 
TIAL1                 0.098   TIA-1 related protein isoform 2 
TIA1                  0.098   TIA1 protein isoform 2 
PABPC4L               0.094   poly(A) binding protein, cytoplasmic 4-like 
PABPC1L2B             0.092   poly(A) binding protein, cytoplasmic 1-like 2B [Hom...
PABPC1L2A             0.092   poly(A) binding protein, cytoplasmic 1-like 2A [Homo...
BRUNOL5               0.088   bruno-like 5, RNA binding protein isoform 1 
SF3B4                 0.087   splicing factor 3b, subunit 4 
BRUNOL4               0.085   bruno-like 4, RNA binding protein isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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