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Name: UBE2C Sequence: fasta or formatted (179aa) NCBI GI: 5902146
Description:

ubiquitin-conjugating enzyme E2C isoform 1

Referenced in:

Cyclins and Related Functions
Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [161aa] ubiquitin-conjugating enzyme E2C isoform 2
alt prot [150aa] ubiquitin-conjugating enzyme E2C isoform 3
alt prot [140aa] ubiquitin-conjugating enzyme E2C isoform 4
alt prot [140aa] ubiquitin-conjugating enzyme E2C isoform 4
alt prot [50aa] ubiquitin-conjugating enzyme E2C isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         17           3
 C cysteine            1.1          2           1
 D aspartate           4.5          8           1
 E glutamate           5.6         10           1
 F phenylalanine       2.8          5           1
 G glycine             7.3         13           2
 H histidine           1.7          3           1
 I isoleucine          3.9          7           1
 K lysine              6.7         12           2
 L leucine            10.1         18           2
 M methionine          2.2          4           2
 N asparagine          4.5          8           1
 P proline             7.3         13           1
 Q glutamine           4.5          8           2
 R arginine            3.4          6           1
 S serine              7.8         14           1
 T threonine           6.7         12           1
 V valine              4.5          8           1
 W tryptophan          1.7          3           1
 Y tyrosine            4.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2C                 0.784   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.784   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.778   ubiquitin-conjugating enzyme E2C isoform 3 
UBE2C                 0.567   ubiquitin-conjugating enzyme E2C isoform 2 
UBE2B                 0.289   ubiquitin-conjugating enzyme E2B 
UBE2A                 0.287   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2N                 0.249   ubiquitin-conjugating enzyme E2N 
UBE2D1                0.243   ubiquitin-conjugating enzyme E2D 1 
UBE2D4                0.237   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D3                0.228   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.228   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.228   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.228   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.228   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.228   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.228   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.228   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D2                0.228   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2E3                0.222   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.222   ubiquitin-conjugating enzyme E2E 3 
UBE2D3                0.222   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2E2                0.216   ubiquitin-conjugating enzyme E2E 2 
UBE2T                 0.216   ubiquitin-conjugating enzyme E2T 
UBE2E1                0.213   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2R2                0.211   ubiquitin-conjugating enzyme UBC3B 
UBE2G1                0.205   ubiquitin-conjugating enzyme E2G 1 
UBE2K                 0.196   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2NL                0.196   ubiquitin-conjugating enzyme E2N-like 
UBE2D2                0.193   ubiquitin-conjugating enzyme E2D 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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