Guide to the Human Genome
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Name: UBE2K Sequence: fasta or formatted (200aa) NCBI GI: 4885417
Description:

ubiquitin-conjugating enzyme E2K isoform 1

Referenced in:

Additional Brain Proteins
Ring Finger Proteins
Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [157aa] ubiquitin-conjugating enzyme E2K isoform 2
alt prot [149aa] ubiquitin-conjugating enzyme E2K isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         21           3
 C cysteine            1.0          2           1
 D aspartate           5.0         10           2
 E glutamate           8.0         16           2
 F phenylalanine       3.0          6           1
 G glycine             3.5          7           2
 H histidine           1.0          2           1
 I isoleucine          6.5         13           1
 K lysine              7.0         14           2
 L leucine             9.0         18           3
 M methionine          2.0          4           1
 N asparagine          5.0         10           1
 P proline             6.5         13           2
 Q glutamine           4.5          9           1
 R arginine            4.0          8           1
 S serine              5.5         11           2
 T threonine           6.0         12           1
 V valine              7.0         14           2
 W tryptophan          2.0          4           1
 Y tyrosine            3.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2K                 0.703   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2K                 0.653   ubiquitin-conjugating enzyme E2K isoform 3 
UBE2N                 0.289   ubiquitin-conjugating enzyme E2N 
UBE2D4                0.257   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D2                0.252   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.249   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D1                0.249   ubiquitin-conjugating enzyme E2D 1 
UBE2D3                0.247   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.247   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.247   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.247   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.247   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.247   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.247   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D2                0.239   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2T                 0.236   ubiquitin-conjugating enzyme E2T 
UBE2D3                0.236   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2NL                0.231   ubiquitin-conjugating enzyme E2N-like 
UBE2E2                0.220   ubiquitin-conjugating enzyme E2E 2 
UBE2E1                0.220   ubiquitin-conjugating enzyme E2E 1 isoform 2 
UBE2E1                0.220   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2E3                0.220   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.220   ubiquitin-conjugating enzyme E2E 3 
UBE2S                 0.191   ubiquitin-conjugating enzyme E2S 
UBE2H                 0.180   ubiquitin-conjugating enzyme E2H isoform 1 
UBE2B                 0.180   ubiquitin-conjugating enzyme E2B 
UBE2A                 0.180   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2C                 0.178   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2C                 0.178   ubiquitin-conjugating enzyme E2C isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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