Guide to the Human Genome
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Name: UBE2B Sequence: fasta or formatted (152aa) NCBI GI: 4507771
Description:

ubiquitin-conjugating enzyme E2B

Referenced in:

DNases, Recombination, and DNA Repair
Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3          8           2
 C cysteine            0.7          1           1
 D aspartate           5.3          8           1
 E glutamate           7.9         12           2
 F phenylalanine       4.6          7           1
 G glycine             3.9          6           1
 H histidine           0.7          1           1
 I isoleucine          5.3          8           1
 K lysine              3.9          6           1
 L leucine             6.6         10           2
 M methionine          2.6          4           1
 N asparagine          7.2         11           2
 P proline             9.2         14           2
 Q glutamine           5.3          8           1
 R arginine            5.9          9           3
 S serine             10.5         16           2
 T threonine           3.9          6           1
 V valine              5.9          9           1
 W tryptophan          2.0          3           1
 Y tyrosine            3.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2B 
UBE2A                 0.958   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2A                 0.699   ubiquitin-conjugating enzyme E2A isoform 2 
UBE2A                 0.453   ubiquitin-conjugating enzyme E2A isoform 3 
UBE2D1                0.363   ubiquitin-conjugating enzyme E2D 1 
UBE2D4                0.363   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2G2                0.360   ubiquitin-conjugating enzyme E2G 2 isoform 1 
UBE2D2                0.353   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.349   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D3                0.349   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.349   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.349   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.349   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.349   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.349   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.349   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.346   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2N                 0.346   ubiquitin-conjugating enzyme E2N 
UBE2I                 0.346   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.346   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.346   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.346   ubiquitin-conjugating enzyme E2I 
UBE2C                 0.343   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2C                 0.322   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.322   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2E2                0.318   ubiquitin-conjugating enzyme E2E 2 
UBE2E3                0.318   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.318   ubiquitin-conjugating enzyme E2E 3 
UBE2E1                0.315   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2R2                0.311   ubiquitin-conjugating enzyme UBC3B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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