Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 57863281
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|57863281 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 1 [Homo sapiens]
(421 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57863281 Meis1, myeloid ecotropic viral integration site 1 ho... 892 0.0
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho... 713 0.0
gi|24762246 Meis homeobox 2 isoform b [Homo sapiens] 494 e-140
gi|24762244 Meis homeobox 2 isoform a [Homo sapiens] 493 e-139
gi|24762250 Meis homeobox 2 isoform d [Homo sapiens] 478 e-135
gi|24762241 Meis homeobox 2 isoform c [Homo sapiens] 478 e-135
gi|4505151 Meis homeobox 1 [Homo sapiens] 475 e-134
gi|24762225 Meis homeobox 2 isoform f [Homo sapiens] 475 e-134
gi|27502381 Meis homeobox 2 isoform g [Homo sapiens] 474 e-134
gi|27502383 Meis homeobox 2 isoform h [Homo sapiens] 434 e-122
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens] 200 2e-51
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens] 186 3e-47
gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo ... 61 2e-09
gi|28178845 TG-interacting factor isoform b [Homo sapiens] 61 2e-09
gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo ... 60 5e-09
gi|28178843 TG-interacting factor isoform a [Homo sapiens] 59 1e-08
gi|4507473 TG-interacting factor isoform c [Homo sapiens] 59 1e-08
gi|28178849 TG-interacting factor isoform c [Homo sapiens] 59 1e-08
gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens] 57 3e-08
gi|186910311 SIX homeobox 6 [Homo sapiens] 53 5e-07
gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] 53 6e-07
gi|28178855 TG-interacting factor isoform d [Homo sapiens] 52 8e-07
gi|28178853 TG-interacting factor isoform d [Homo sapiens] 52 8e-07
gi|28178851 TG-interacting factor isoform d [Homo sapiens] 52 8e-07
gi|28178857 TG-interacting factor isoform d [Homo sapiens] 52 8e-07
gi|142976638 sine oculis homeobox homolog 4 [Homo sapiens] 51 2e-06
gi|5174681 SIX homeobox 1 [Homo sapiens] 51 2e-06
gi|219275578 SIX homeobox 2 [Homo sapiens] 51 2e-06
gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens] 50 3e-06
gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens] 48 2e-05
>gi|57863281 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 1 [Homo sapiens]
Length = 421
Score = 892 bits (2305), Expect = 0.0
Identities = 421/421 (100%), Positives = 421/421 (100%)
Query: 1 MARRYDELPHYPGIVDGPAALASFPETVPAVPGPYGPHRPPQPLPPGLDSDGLKREKDEI 60
MARRYDELPHYPGIVDGPAALASFPETVPAVPGPYGPHRPPQPLPPGLDSDGLKREKDEI
Sbjct: 1 MARRYDELPHYPGIVDGPAALASFPETVPAVPGPYGPHRPPQPLPPGLDSDGLKREKDEI 60
Query: 61 YGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQVRSER 120
YGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQVRSER
Sbjct: 61 YGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQVRSER 120
Query: 121 PLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHRYITCLKGKMPIDLVIEDRDG 180
PLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHRYITCLKGKMPIDLVIEDRDG
Sbjct: 121 PLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHRYITCLKGKMPIDLVIEDRDG 180
Query: 181 GCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVHLGTPGPSSGGLASQSGDNSSDQGDGL 240
GCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVHLGTPGPSSGGLASQSGDNSSDQGDGL
Sbjct: 181 GCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVHLGTPGPSSGGLASQSGDNSSDQGDGL 240
Query: 241 DTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSRRSEAPVLPDVCLG 300
DTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSRRSEAPVLPDVCLG
Sbjct: 241 DTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSRRSEAPVLPDVCLG 300
Query: 301 LGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQLAQDTGLTILQVNNWFI 360
LGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQLAQDTGLTILQVNNWFI
Sbjct: 301 LGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQLAQDTGLTILQVNNWFI 360
Query: 361 NARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVRPPGSVGMSLNLEGEWHY 420
NARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVRPPGSVGMSLNLEGEWHY
Sbjct: 361 NARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVRPPGSVGMSLNLEGEWHY 420
Query: 421 L 421
L
Sbjct: 421 L 421
>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 2 [Homo sapiens]
Length = 358
Score = 713 bits (1840), Expect = 0.0
Identities = 358/421 (85%), Positives = 358/421 (85%), Gaps = 63/421 (14%)
Query: 1 MARRYDELPHYPGIVDGPAALASFPETVPAVPGPYGPHRPPQPLPPGLDSDGLKREKDEI 60
MARRYDELPHYPGIVDGPAALASFPETVPAVPGPYGPHRPPQPLPPGLDSDGLKREKDEI
Sbjct: 1 MARRYDELPHYPGIVDGPAALASFPETVPAVPGPYGPHRPPQPLPPGLDSDGLKREKDEI 60
Query: 61 YGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQVRSER 120
YGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQVRSER
Sbjct: 61 YGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQVRSER 120
Query: 121 PLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHRYITCLKGKMPIDLVIEDRDG 180
PLFSSNPELDNLMIQAIQVLRFHLLELE KGKMPIDLVIEDRDG
Sbjct: 121 PLFSSNPELDNLMIQAIQVLRFHLLELE-----------------KGKMPIDLVIEDRDG 163
Query: 181 GCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVHLGTPGPSSGGLASQSGDNSSDQGDGL 240
GCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVHLGTPGPSSGGLASQSGDNSSDQGDGL
Sbjct: 164 GCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVHLGTPGPSSGGLASQSGDNSSDQGDGL 223
Query: 241 DTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSRRSEAPVLPDVCLG 300
DTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLS
Sbjct: 224 DTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLS-------------- 269
Query: 301 LGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQLAQDTGLTILQVNNWFI 360
HPYPSEEQKKQLAQDTGLTILQVNNWFI
Sbjct: 270 --------------------------------HPYPSEEQKKQLAQDTGLTILQVNNWFI 297
Query: 361 NARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVRPPGSVGMSLNLEGEWHY 420
NARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVRPPGSVGMSLNLEGEWHY
Sbjct: 298 NARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVRPPGSVGMSLNLEGEWHY 357
Query: 421 L 421
L
Sbjct: 358 L 358
>gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]
Length = 394
Score = 494 bits (1271), Expect = e-140
Identities = 268/447 (59%), Positives = 311/447 (69%), Gaps = 79/447 (17%)
Query: 1 MARRYDELPHYPGI--VDGPAALASFPETVPAVP-------GP-------YGPHRP-PQP 43
MA+RYDELPHY G+ V PA++ P +P GP YG H P P
Sbjct: 1 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV 60
Query: 44 LPPGLDS---DGLKREKDEIYGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVC 100
+P + S D LKR+KD IYGHPLFPLLALVFEKCELATC+PR+ AG GDVC
Sbjct: 61 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAG------GDVC 114
Query: 101 SSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHR 160
SSDSFNEDIA FAKQVR+E+PLFSSNPELDNLMIQAIQVLRFHLLELEKVH+LCDNFCHR
Sbjct: 115 SSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHR 174
Query: 161 YITCLKGKMPIDLVIEDRDGGCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVH-LGTPG 219
YI+CLKGKMPIDLVI++RDG + D E+ S +L D N RDH+D+ S H GTPG
Sbjct: 175 YISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPG 234
Query: 220 PSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRA 279
PSSGG ASQSGDNSS+QGDGLD SVASP + G+D+D D++++R KKRGIFPKVATNIMRA
Sbjct: 235 PSSGGHASQSGDNSSEQGDGLDNSVASPGT-GDDDDPDKDKKRQKKRGIFPKVATNIMRA 293
Query: 280 WLFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEE 339
WLFQHL+ HPYPSEE
Sbjct: 294 WLFQHLT----------------------------------------------HPYPSEE 307
Query: 340 QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR-TGQGAAFSPEGQPIGGYT-ETQ 397
QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR QGAA+SPEGQP+G + + Q
Sbjct: 308 QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQ 367
Query: 398 PHVAVRPPG---SVGMSLNLEGEWHYL 421
H+ +RP G +GM++ ++G+WHY+
Sbjct: 368 QHMGIRPAGPMSGMGMNMGMDGQWHYM 394
>gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]
Length = 401
Score = 493 bits (1270), Expect = e-139
Identities = 269/454 (59%), Positives = 312/454 (68%), Gaps = 86/454 (18%)
Query: 1 MARRYDELPHYPGI--VDGPAALASFPETVPAVP-------GP-------YGPHRP-PQP 43
MA+RYDELPHY G+ V PA++ P +P GP YG H P P
Sbjct: 1 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV 60
Query: 44 LPPGLDS---DGLKREKDEIYGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVC 100
+P + S D LKR+KD IYGHPLFPLLALVFEKCELATC+PR+ AG GDVC
Sbjct: 61 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAG------GDVC 114
Query: 101 SSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHR 160
SSDSFNEDIA FAKQVR+E+PLFSSNPELDNLMIQAIQVLRFHLLELEKVH+LCDNFCHR
Sbjct: 115 SSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHR 174
Query: 161 YITCLKGKMPIDLVIEDRDGGCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVH-LGTPG 219
YI+CLKGKMPIDLVI++RDG + D E+ S +L D N RDH+D+ S H GTPG
Sbjct: 175 YISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPG 234
Query: 220 PSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRA 279
PSSGG ASQSGDNSS+QGDGLD SVASP + G+D+D D++++R KKRGIFPKVATNIMRA
Sbjct: 235 PSSGGHASQSGDNSSEQGDGLDNSVASPGT-GDDDDPDKDKKRQKKRGIFPKVATNIMRA 293
Query: 280 WLFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEE 339
WLFQHL+ HPYPSEE
Sbjct: 294 WLFQHLT----------------------------------------------HPYPSEE 307
Query: 340 QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTG--------QGAAFSPEGQPIG 391
QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR G QGAA+SPEGQP+G
Sbjct: 308 QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQPMG 367
Query: 392 GYT-ETQPHVAVRPPG---SVGMSLNLEGEWHYL 421
+ + Q H+ +RP G +GM++ ++G+WHY+
Sbjct: 368 SFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM 401
>gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]
Length = 470
Score = 478 bits (1231), Expect = e-135
Identities = 263/433 (60%), Positives = 299/433 (69%), Gaps = 76/433 (17%)
Query: 1 MARRYDELPHYPGI--VDGPAALASFPETVPAVP-------GP-------YGPHRP-PQP 43
MA+RYDELPHY G+ V PA++ P +P GP YG H P P
Sbjct: 1 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV 60
Query: 44 LPPGLDS---DGLKREKDEIYGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVC 100
+P + S D LKR+KD IYGHPLFPLLALVFEKCELATC+PR+ AG GDVC
Sbjct: 61 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAG------GDVC 114
Query: 101 SSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHR 160
SSDSFNEDIA FAKQVR+E+PLFSSNPELDNLMIQAIQVLRFHLLELEKVH+LCDNFCHR
Sbjct: 115 SSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHR 174
Query: 161 YITCLKGKMPIDLVIEDRDGGCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVH-LGTPG 219
YI+CLKGKMPIDLVI++RDG + D E+ S +L D N RDH+D+ S H GTPG
Sbjct: 175 YISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPG 234
Query: 220 PSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRA 279
PSSGG ASQSGDNSS+QGDGLD SVASP + G+D+D D++++R KKRGIFPKVATNIMRA
Sbjct: 235 PSSGGHASQSGDNSSEQGDGLDNSVASPGT-GDDDDPDKDKKRQKKRGIFPKVATNIMRA 293
Query: 280 WLFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEE 339
WLFQHL+ HPYPSEE
Sbjct: 294 WLFQHLT----------------------------------------------HPYPSEE 307
Query: 340 QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR-TGQGAAFSPEGQPIGGYT-ETQ 397
QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR QGAA+SPEGQP+G + + Q
Sbjct: 308 QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQ 367
Query: 398 PHVAVRPPGSVGM 410
H+ +RP G M
Sbjct: 368 QHMGIRPAGLQSM 380
>gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]
Length = 477
Score = 478 bits (1230), Expect = e-135
Identities = 264/440 (60%), Positives = 300/440 (68%), Gaps = 83/440 (18%)
Query: 1 MARRYDELPHYPGI--VDGPAALASFPETVPAVP-------GP-------YGPHRP-PQP 43
MA+RYDELPHY G+ V PA++ P +P GP YG H P P
Sbjct: 1 MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNV 60
Query: 44 LPPGLDS---DGLKREKDEIYGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVC 100
+P + S D LKR+KD IYGHPLFPLLALVFEKCELATC+PR+ AG GDVC
Sbjct: 61 MPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAG------GDVC 114
Query: 101 SSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHR 160
SSDSFNEDIA FAKQVR+E+PLFSSNPELDNLMIQAIQVLRFHLLELEKVH+LCDNFCHR
Sbjct: 115 SSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHR 174
Query: 161 YITCLKGKMPIDLVIEDRDGGCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVH-LGTPG 219
YI+CLKGKMPIDLVI++RDG + D E+ S +L D N RDH+D+ S H GTPG
Sbjct: 175 YISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPG 234
Query: 220 PSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRA 279
PSSGG ASQSGDNSS+QGDGLD SVASP + G+D+D D++++R KKRGIFPKVATNIMRA
Sbjct: 235 PSSGGHASQSGDNSSEQGDGLDNSVASPGT-GDDDDPDKDKKRQKKRGIFPKVATNIMRA 293
Query: 280 WLFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEE 339
WLFQHL+ HPYPSEE
Sbjct: 294 WLFQHLT----------------------------------------------HPYPSEE 307
Query: 340 QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTG--------QGAAFSPEGQPIG 391
QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR G QGAA+SPEGQP+G
Sbjct: 308 QKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQPMG 367
Query: 392 GYT-ETQPHVAVRPPGSVGM 410
+ + Q H+ +RP G M
Sbjct: 368 SFVLDGQQHMGIRPAGLQSM 387
>gi|4505151 Meis homeobox 1 [Homo sapiens]
Length = 390
Score = 475 bits (1222), Expect = e-134
Identities = 259/446 (58%), Positives = 310/446 (69%), Gaps = 81/446 (18%)
Query: 1 MARRYDELPHYPGIVDG---PAALASFPETVPAV-PGPYGPHRPP------------QPL 44
MA+RYD+LPHY G+ DG P+ + P ++ P + H PP +
Sbjct: 1 MAQRYDDLPHYGGM-DGVGIPSTMYGDPHAARSMQPVHHLNHGPPLHSHQYPHTAHTNAM 59
Query: 45 PPGLDS---DGLKREKDEIYGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVCS 101
P + S D LKR+KD IYGHPLFPLLAL+FEKCELATC+PR+ AG GDVCS
Sbjct: 60 APSMGSSVNDALKRDKDAIYGHPLFPLLALIFEKCELATCTPREPGVAG------GDVCS 113
Query: 102 SDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHRY 161
S+SFNEDIA FAKQ+R+E+PLFSSNPELDNLMIQAIQVLRFHLLELEKVH+LCDNFCHRY
Sbjct: 114 SESFNEDIAVFAKQIRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRY 173
Query: 162 ITCLKGKMPIDLVIEDRDGGCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVHL-GTPGP 220
I+CLKGKMPIDLVI+DR+GG + D ED S +L DQ + W RDH+D+ S GTPGP
Sbjct: 174 ISCLKGKMPIDLVIDDREGGSKSDSEDITRSA-NLTDQPS-WNRDHDDTASTRSGGTPGP 231
Query: 221 SSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAW 280
SSGG S SGDNSS+QGDGLD SVASPS+ G+D+D D++++R+KKRGIFPKVATNIMRAW
Sbjct: 232 SSGGHTSHSGDNSSEQGDGLDNSVASPST-GDDDDPDKDKKRHKKRGIFPKVATNIMRAW 290
Query: 281 LFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQ 340
LFQHL+ HPYPSEEQ
Sbjct: 291 LFQHLT----------------------------------------------HPYPSEEQ 304
Query: 341 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR-TGQGAAFSPEGQPIGGYT-ETQP 398
KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR QG ++P+GQP+GG+ + Q
Sbjct: 305 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGTPYNPDGQPMGGFVMDGQQ 364
Query: 399 HVAVRPPG---SVGMSLNLEGEWHYL 421
H+ +R PG +GM++ +EG+WHY+
Sbjct: 365 HMGIRAPGPMSGMGMNMGMEGQWHYM 390
>gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]
Length = 381
Score = 475 bits (1222), Expect = e-134
Identities = 250/397 (62%), Positives = 288/397 (72%), Gaps = 63/397 (15%)
Query: 35 YGPHRP-PQPLPPGLDS---DGLKREKDEIYGHPLFPLLALVFEKCELATCSPRDGAGAG 90
YG H P P +P + S D LKR+KD IYGHPLFPLLALVFEKCELATC+PR+ AG
Sbjct: 38 YGAHAPHPNVMPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAG 97
Query: 91 LGTPPGGDVCSSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKV 150
GDVCSSDSFNEDIA FAKQVR+E+PLFSSNPELDNLMIQAIQVLRFHLLELEKV
Sbjct: 98 ------GDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKV 151
Query: 151 HDLCDNFCHRYITCLKGKMPIDLVIEDRDGGCREDFEDYPASCPSLPDQNNMWIRDHEDS 210
H+LCDNFCHRYI+CLKGKMPIDLVI++RDG + D E+ S +L D N RDH+D+
Sbjct: 152 HELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDA 211
Query: 211 GSVH-LGTPGPSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIF 269
S H GTPGPSSGG ASQSGDNSS+QGDGLD SVASP + G+D+D D++++R KKRGIF
Sbjct: 212 TSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGT-GDDDDPDKDKKRQKKRGIF 270
Query: 270 PKVATNIMRAWLFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCW 329
PKVATNIMRAWLFQHL+
Sbjct: 271 PKVATNIMRAWLFQHLT------------------------------------------- 287
Query: 330 WLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR-TGQGAAFSPEGQ 388
HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR QGAA+SPEGQ
Sbjct: 288 ---HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGAAYSPEGQ 344
Query: 389 PIGGYT-ETQPHVAVRPPG---SVGMSLNLEGEWHYL 421
P+G + + Q H+ +RP G +GM++ ++G+WHY+
Sbjct: 345 PMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM 381
>gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]
Length = 388
Score = 474 bits (1221), Expect = e-134
Identities = 251/404 (62%), Positives = 289/404 (71%), Gaps = 70/404 (17%)
Query: 35 YGPHRP-PQPLPPGLDS---DGLKREKDEIYGHPLFPLLALVFEKCELATCSPRDGAGAG 90
YG H P P +P + S D LKR+KD IYGHPLFPLLALVFEKCELATC+PR+ AG
Sbjct: 38 YGAHAPHPNVMPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAG 97
Query: 91 LGTPPGGDVCSSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKV 150
GDVCSSDSFNEDIA FAKQVR+E+PLFSSNPELDNLMIQAIQVLRFHLLELEKV
Sbjct: 98 ------GDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKV 151
Query: 151 HDLCDNFCHRYITCLKGKMPIDLVIEDRDGGCREDFEDYPASCPSLPDQNNMWIRDHEDS 210
H+LCDNFCHRYI+CLKGKMPIDLVI++RDG + D E+ S +L D N RDH+D+
Sbjct: 152 HELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDA 211
Query: 211 GSVH-LGTPGPSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIF 269
S H GTPGPSSGG ASQSGDNSS+QGDGLD SVASP + G+D+D D++++R KKRGIF
Sbjct: 212 TSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGT-GDDDDPDKDKKRQKKRGIF 270
Query: 270 PKVATNIMRAWLFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCW 329
PKVATNIMRAWLFQHL+
Sbjct: 271 PKVATNIMRAWLFQHLT------------------------------------------- 287
Query: 330 WLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTG--------QGA 381
HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR G QGA
Sbjct: 288 ---HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGA 344
Query: 382 AFSPEGQPIGGYT-ETQPHVAVRPPG---SVGMSLNLEGEWHYL 421
A+SPEGQP+G + + Q H+ +RP G +GM++ ++G+WHY+
Sbjct: 345 AYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM 388
>gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
Length = 306
Score = 434 bits (1117), Expect = e-122
Identities = 227/359 (63%), Positives = 263/359 (73%), Gaps = 59/359 (16%)
Query: 69 LALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQVRSERPLFSSNPE 128
+ALVFEKCELATC+PR+ AG GDVCSSDSFNEDIA FAKQVR+E+PLFSSNPE
Sbjct: 1 MALVFEKCELATCTPREPGVAG------GDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPE 54
Query: 129 LDNLMIQAIQVLRFHLLELEKVHDLCDNFCHRYITCLKGKMPIDLVIEDRDGGCREDFED 188
LDNLMIQAIQVLRFHLLELEKVH+LCDNFCHRYI+CLKGKMPIDLVI++RDG + D E+
Sbjct: 55 LDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEE 114
Query: 189 YPASCPSLPDQNNMWIRDHEDSGSVH-LGTPGPSSGGLASQSGDNSSDQGDGLDTSVASP 247
S +L D N RDH+D+ S H GTPGPSSGG ASQSGDNSS+QGDGLD SVASP
Sbjct: 115 LSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASP 174
Query: 248 SSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSRRSEAPVLPDVCLGLGSPSPG 307
+ G+D+D D++++R KKRGIFPKVATNIMRAWLFQHL+
Sbjct: 175 GT-GDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLT--------------------- 212
Query: 308 PRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 367
HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV
Sbjct: 213 -------------------------HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 247
Query: 368 QPMIDQSNR-TGQGAAFSPEGQPIGGYT-ETQPHVAVRPPG---SVGMSLNLEGEWHYL 421
QPMIDQSNR QGAA+SPEGQP+G + + Q H+ +RP G +GM++ ++G+WHY+
Sbjct: 248 QPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM 306
>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
Length = 472
Score = 200 bits (509), Expect = 2e-51
Identities = 146/400 (36%), Positives = 191/400 (47%), Gaps = 102/400 (25%)
Query: 12 PGIVDGP--AALASFPETVPAV--PGPYGPHRPPQPLPPGLDSDGLKREKDEIYGHPLFP 67
P D P A A P AV P P P P L+ +K +Y HPLFP
Sbjct: 22 PPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAPIDPQAQLEADKRAVYRHPLFP 81
Query: 68 LLALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQVRSE-RPLFSSN 126
LL L+FEKCE AT G + +S SF+ DI F Q E +P FS +
Sbjct: 82 LLTLLFEKCEQAT--------------QGSECITSASFDVDIENFVHQQEQEHKPFFSDD 127
Query: 127 PELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHRYITCLKGKMPIDLVIEDRDGGCREDF 186
PELDNLM++AIQVLR HLLELEKV++LC +FC+RYITCLK KM D ++ + GG
Sbjct: 128 PELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGG----- 182
Query: 187 EDYPASCPSLPDQNNMWIRDHEDSGSVHLGTPG----PSS----GGLASQSGDNSSDQGD 238
Y + PS+ + +++ +S S P P+S G +A + ++ G
Sbjct: 183 -PYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSGG 241
Query: 239 GLDTSVASPSSGGE----------------------DEDLDQERRRNK-KRGIFPKVATN 275
L V +S G+ LD E +++K KRG+ PK ATN
Sbjct: 242 ALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATN 301
Query: 276 IMRAWLFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPY 335
IMR+WLFQH L HPY
Sbjct: 302 IMRSWLFQH----------------------------------------------LMHPY 315
Query: 336 PSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSN 375
P+E++K+Q+A T LT+LQVNNWFINARRRI+QPM+D SN
Sbjct: 316 PTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASN 355
>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
Length = 436
Score = 186 bits (472), Expect = 3e-47
Identities = 129/386 (33%), Positives = 184/386 (47%), Gaps = 82/386 (21%)
Query: 45 PPGLDSDGLKREKDEIYGHPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDS 104
PP + +K IY HPLFPLLAL+FEKCE +T G + +S S
Sbjct: 43 PPVESQTPMDVDKQAIYRHPLFPLLALLFEKCEQST--------------QGSEGTTSAS 88
Query: 105 FNEDIAAFA-KQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHRYIT 163
F+ DI F KQ + +P F +PE DNLM++AIQVLR HLLELEKV++LC +FC RYI
Sbjct: 89 FDVDIENFVRKQEKEGKPFFCEDPETDNLMVKAIQVLRIHLLELEKVNELCKDFCSRYIA 148
Query: 164 CLKGKMPIDLVIEDRDGGCREDFED---YPASCPSLPDQNNMWIRDHEDSGSVHLGTPGP 220
CLK KM + ++ G + A ++ Q + G+V + T
Sbjct: 149 CLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGTISPQGIVVPASALQQGNVAMAT--- 205
Query: 221 SSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRN------------KKRGI 268
+GG Q + QG + +++ + ++ L + ++ KRG+
Sbjct: 206 VAGGTVYQPVTVVTPQGQVVTQTLSPGTIRIQNSQLQLQLNQDLSILHQDDGSSKNKRGV 265
Query: 269 FPKVATNIMRAWLFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSC 328
PK ATN+MR+WLFQH+
Sbjct: 266 LPKHATNVMRSWLFQHIG------------------------------------------ 283
Query: 329 WWLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQS-NRTGQGAAFSPEG 387
HPYP+E++KKQ+A T LT+LQVNNWFINARRRI+QPM+D S + T + + +
Sbjct: 284 ----HPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKTAQN 339
Query: 388 QPIGGY--TETQPHVAVRPPGSVGMS 411
+P+ + VA PP + MS
Sbjct: 340 RPVQRFWPDSIASGVAQPPPSELTMS 365
>gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo
sapiens]
Length = 241
Score = 61.2 bits (147), Expect = 2e-09
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 46/155 (29%)
Query: 219 GPSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMR 278
GP+ + + Q DTS+ S ++ L + K++G P + I+R
Sbjct: 7 GPAETQSPVEKDSPAKTQSPAQDTSIMSRNNADTGRVLALPEHKKKRKGNLPAESVKILR 66
Query: 279 AWLFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSE 338
W+++H + YPSE
Sbjct: 67 DWMYKHRFKA----------------------------------------------YPSE 80
Query: 339 EQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQ 373
E+K+ L++ T L++LQ++NWFINARRRI+ M+ Q
Sbjct: 81 EEKQMLSEKTNLSLLQISNWFINARRRILPDMLQQ 115
>gi|28178845 TG-interacting factor isoform b [Homo sapiens]
Length = 286
Score = 60.8 bits (146), Expect = 2e-09
Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 55/183 (30%)
Query: 221 SSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAW 280
SS G+ + SG + D+ D +D + SS G + ++RG PK + I+R W
Sbjct: 17 SSQGIVAASGSETEDE-DSMDIPLDLSSSAGSG--------KRRRRGNLPKESVQILRDW 67
Query: 281 LFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQ 340
L++H + YPSE++
Sbjct: 68 LYEHR----------------------------------------------YNAYPSEQE 81
Query: 341 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHV 400
K L+Q T L+ LQV NWFINARRR++ M+ + + S G I + + +
Sbjct: 82 KALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVM 141
Query: 401 AVR 403
++
Sbjct: 142 GIK 144
>gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo
sapiens]
Length = 185
Score = 59.7 bits (143), Expect = 5e-09
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 46/155 (29%)
Query: 219 GPSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMR 278
GP+ + + Q DTS+ S ++ L + K++G P + I+R
Sbjct: 7 GPAETQSPVEKDSPAKTQSPAQDTSIMSRNNADTGRVLALPEHKKKRKGNLPAESVKILR 66
Query: 279 AWLFQHLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSE 338
W+++H + YPSE
Sbjct: 67 DWMYKHRFKA----------------------------------------------YPSE 80
Query: 339 EQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQ 373
E+K+ L++ T L++L+++NWFINARRRI+ M+ Q
Sbjct: 81 EEKQMLSEKTNLSLLRISNWFINARRRILPDMLQQ 115
>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
Length = 401
Score = 58.5 bits (140), Expect = 1e-08
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 55/180 (30%)
Query: 224 GLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQ 283
G+ + SG + D+ D +D + SS G + ++RG PK + I+R WL++
Sbjct: 135 GIVAASGSETEDE-DSMDIPLDLSSSAGSG--------KRRRRGNLPKESVQILRDWLYE 185
Query: 284 HLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQ 343
H + YPSE++K
Sbjct: 186 HR----------------------------------------------YNAYPSEQEKAL 199
Query: 344 LAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVR 403
L+Q T L+ LQV NWFINARRR++ M+ + + S G I + + + ++
Sbjct: 200 LSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIK 259
>gi|4507473 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 58.5 bits (140), Expect = 1e-08
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 55/180 (30%)
Query: 224 GLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQ 283
G+ + SG + D+ D +D + SS G + ++RG PK + I+R WL++
Sbjct: 6 GIVAASGSETEDE-DSMDIPLDLSSSAGSG--------KRRRRGNLPKESVQILRDWLYE 56
Query: 284 HLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQ 343
H + YPSE++K
Sbjct: 57 HR----------------------------------------------YNAYPSEQEKAL 70
Query: 344 LAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVR 403
L+Q T L+ LQV NWFINARRR++ M+ + + S G I + + + ++
Sbjct: 71 LSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIK 130
>gi|28178849 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 58.5 bits (140), Expect = 1e-08
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 55/180 (30%)
Query: 224 GLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQ 283
G+ + SG + D+ D +D + SS G + ++RG PK + I+R WL++
Sbjct: 6 GIVAASGSETEDE-DSMDIPLDLSSSAGSG--------KRRRRGNLPKESVQILRDWLYE 56
Query: 284 HLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQ 343
H + YPSE++K
Sbjct: 57 HR----------------------------------------------YNAYPSEQEKAL 70
Query: 344 LAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVR 403
L+Q T L+ LQV NWFINARRR++ M+ + + S G I + + + ++
Sbjct: 71 LSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIK 130
>gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]
Length = 237
Score = 57.0 bits (136), Expect = 3e-08
Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 46/142 (32%)
Query: 246 SPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSRRSEAPVLPDVCLGLGSPS 305
S S GEDE L + K+RG PK + I+R WL+ H
Sbjct: 2 SDSDLGEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHR-------------------- 41
Query: 306 PGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 365
+ YPSE++K L+ T L++LQ+ NWFINARRR
Sbjct: 42 --------------------------YNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
Query: 366 IVQPMIDQSNRTGQGAAFSPEG 387
++ M+ + + S G
Sbjct: 76 LLPDMLRKDGKDPNQFTISRRG 97
>gi|186910311 SIX homeobox 6 [Homo sapiens]
Length = 246
Score = 53.1 bits (126), Expect = 5e-07
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 13/68 (19%)
Query: 329 WWLQHPYPSEEQKKQLAQDTGLTILQVNNWFIN---------ARRRIVQPMIDQSNRTGQ 379
W+LQ PYP+ +K++LAQ TGLT QV NWF N A+ R+ Q ++ Q G
Sbjct: 146 WYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQQQVLSQ----GS 201
Query: 380 GAAFSPEG 387
G A EG
Sbjct: 202 GRALRAEG 209
>gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
Length = 332
Score = 52.8 bits (125), Expect = 6e-07
Identities = 36/88 (40%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 329 WWLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQ 388
W+LQ PYP+ +K++LAQ TGLT QV NWF N R+R NR Q A P G
Sbjct: 224 WYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQR--DRAAAAKNRL-QHQAIGPSGM 280
Query: 389 --------PIGGYTETQPHVAVRPPGSV 408
P G E+ P A P SV
Sbjct: 281 RSLAEPGCPTHGSAES-PSTAASPTTSV 307
>gi|28178855 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 52.4 bits (124), Expect = 8e-07
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 329 WWLQH---PYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSP 385
W +H YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + S
Sbjct: 33 WLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISR 92
Query: 386 EGQPIGGYTETQPHVAVR 403
G I + + + ++
Sbjct: 93 RGAKISETSSVESVMGIK 110
>gi|28178853 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 52.4 bits (124), Expect = 8e-07
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 329 WWLQH---PYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSP 385
W +H YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + S
Sbjct: 33 WLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISR 92
Query: 386 EGQPIGGYTETQPHVAVR 403
G I + + + ++
Sbjct: 93 RGAKISETSSVESVMGIK 110
>gi|28178851 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 52.4 bits (124), Expect = 8e-07
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 329 WWLQH---PYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSP 385
W +H YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + S
Sbjct: 33 WLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISR 92
Query: 386 EGQPIGGYTETQPHVAVR 403
G I + + + ++
Sbjct: 93 RGAKISETSSVESVMGIK 110
>gi|28178857 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 52.4 bits (124), Expect = 8e-07
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 329 WWLQH---PYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSP 385
W +H YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + S
Sbjct: 33 WLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISR 92
Query: 386 EGQPIGGYTETQPHVAVR 403
G I + + + ++
Sbjct: 93 RGAKISETSSVESVMGIK 110
>gi|142976638 sine oculis homeobox homolog 4 [Homo sapiens]
Length = 781
Score = 51.2 bits (121), Expect = 2e-06
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 332 QHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQPIG 391
Q+ YPS +K+ LA+ TGL++ QV+NWF N R+R P QS G S E +
Sbjct: 244 QNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNP-STEDESSK 302
Query: 392 GYTETQPH-VAVRPPGSVGMSLNLEGEWHYL 421
G+ + PH ++ G +SL+ E Y+
Sbjct: 303 GHEDLSPHPLSSSSDGITNLSLSSHMEPVYM 333
>gi|5174681 SIX homeobox 1 [Homo sapiens]
Length = 284
Score = 50.8 bits (120), Expect = 2e-06
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 329 WWLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 365
W+ +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 142 WYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 178
>gi|219275578 SIX homeobox 2 [Homo sapiens]
Length = 291
Score = 50.8 bits (120), Expect = 2e-06
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 329 WWLQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 365
W+ +PYPS +K++LA+ TGLT QV+NWF N R+R
Sbjct: 142 WYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQR 178
>gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens]
Length = 430
Score = 50.4 bits (119), Expect = 3e-06
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 331 LQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQPI 390
L +PYPSEE K++LA+ G+T+ QV+NWF N R R + + A +
Sbjct: 267 LSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVTQ 326
Query: 391 GGYTETQPHVAVRPPGSVGM--SLNLEG 416
GG++ T + PP S G S NL G
Sbjct: 327 GGHSRTS---SPTPPSSAGSGGSFNLSG 351
>gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
Length = 374
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 331 LQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPM 370
L +PYPSEE K++LA+ GLTI QV+NWF N R R + M
Sbjct: 233 LNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNM 272
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.138 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,264,402
Number of Sequences: 37866
Number of extensions: 1342645
Number of successful extensions: 7898
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 7162
Number of HSP's gapped (non-prelim): 767
length of query: 421
length of database: 18,247,518
effective HSP length: 105
effective length of query: 316
effective length of database: 14,271,588
effective search space: 4509821808
effective search space used: 4509821808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.