TGIF1 24649

Name: TGIF1	Sequence: fasta or formatted (252aa)		NCBI GI: 28178857
Description: TG-interacting factor isoform d		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [401aa] TG-interacting factor isoform a alt prot [286aa] TG-interacting factor isoform b alt prot [272aa] TG-interacting factor isoform c alt mRNA [252aa] TG-interacting factor isoform d alt mRNA [252aa] TG-interacting factor isoform d alt mRNA [252aa] TG-interacting factor isoform d alt prot [272aa] TG-interacting factor isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 16 2 C cysteine 2.0 5 1 D aspartate 5.2 13 1 E glutamate 4.4 11 2 F phenylalanine 3.6 9 1 G glycine 5.6 14 1 H histidine 1.6 4 1 I isoleucine 3.6 9 1 K lysine 5.2 13 1 L leucine 10.3 26 2 M methionine 2.4 6 1 N asparagine 4.8 12 1 P proline 8.7 22 3 Q glutamine 5.6 14 2 R arginine 6.0 15 4 S serine 10.3 26 3 T threonine 7.5 19 2 V valine 4.8 12 1 W tryptophan 0.8 2 1 Y tyrosine 1.6 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TG-interacting factor isoform d TGIF1 1.000 TG-interacting factor isoform a TGIF1 1.000 TG-interacting factor isoform c TGIF1 1.000 TG-interacting factor isoform d TGIF1 1.000 TG-interacting factor isoform d TGIF1 1.000 TG-interacting factor isoform d TGIF1 1.000 TG-interacting factor isoform c TGIF1 1.000 TG-interacting factor isoform b TGIF2 0.352 TGFB-induced factor homeobox 2 TGIF2LX 0.212 TGFB-induced factor homeobox 2-like, X-linked TGIF2LY 0.181 TGFB-induced factor homeobox 2-like, Y-linked PKNOX2 0.113 PBX/knotted 1 homeobox 2 PKNOX1 0.103 PBX/knotted 1 homeobox 1 MEIS1 0.101 Meis homeobox 1 MEIS3 0.101 Meis1, myeloid ecotropic viral integration site 1 ho... MEIS2 0.099 Meis homeobox 2 isoform h MEIS2 0.099 Meis homeobox 2 isoform d MEIS2 0.099 Meis homeobox 2 isoform b MEIS2 0.099 Meis homeobox 2 isoform f MEIS2 0.097 Meis homeobox 2 isoform g MEIS2 0.097 Meis homeobox 2 isoform a MEIS2 0.097 Meis homeobox 2 isoform c IRX4 0.074 iroquois homeobox 4 MKX 0.072 mohawk homeobox IRX6 0.070 iroquois homeobox protein 6 IRX3 0.066 iroquois homeobox 3 IRX1 0.066 iroquois homeobox protein 1 PBX4 0.062 pre-B-cell leukemia homeobox 4 IRX5 0.062 iroquois homeobox protein 5 IRX2 0.062 iroquois homeobox 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.