TGIF1 24643

Name: TGIF1	Sequence: fasta or formatted (401aa)		NCBI GI: 28178843
Description: TG-interacting factor isoform a		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [286aa] TG-interacting factor isoform b alt prot [272aa] TG-interacting factor isoform c alt prot [252aa] TG-interacting factor isoform d alt prot [252aa] TG-interacting factor isoform d alt prot [252aa] TG-interacting factor isoform d alt prot [252aa] TG-interacting factor isoform d alt prot [272aa] TG-interacting factor isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 33 2 C cysteine 2.2 9 1 D aspartate 4.0 16 1 E glutamate 4.2 17 2 F phenylalanine 3.0 12 1 G glycine 7.5 30 4 H histidine 1.7 7 1 I isoleucine 2.5 10 1 K lysine 3.7 15 1 L leucine 9.7 39 2 M methionine 2.0 8 1 N asparagine 3.2 13 1 P proline 11.5 46 5 Q glutamine 4.7 19 2 R arginine 6.7 27 4 S serine 12.2 49 3 T threonine 6.2 25 2 V valine 4.0 16 1 W tryptophan 1.2 5 1 Y tyrosine 1.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TG-interacting factor isoform a TGIF1 0.649 TG-interacting factor isoform b TGIF1 0.648 TG-interacting factor isoform c TGIF1 0.648 TG-interacting factor isoform c TGIF1 0.611 TG-interacting factor isoform d TGIF1 0.611 TG-interacting factor isoform d TGIF1 0.611 TG-interacting factor isoform d TGIF1 0.611 TG-interacting factor isoform d TGIF2 0.215 TGFB-induced factor homeobox 2 TGIF2LX 0.131 TGFB-induced factor homeobox 2-like, X-linked TGIF2LY 0.112 TGFB-induced factor homeobox 2-like, Y-linked MEIS3 0.069 Meis1, myeloid ecotropic viral integration site 1 ho... PKNOX2 0.069 PBX/knotted 1 homeobox 2 PKNOX1 0.065 PBX/knotted 1 homeobox 1 MEIS2 0.062 Meis homeobox 2 isoform h MEIS2 0.062 Meis homeobox 2 isoform d MEIS2 0.062 Meis homeobox 2 isoform b MEIS2 0.062 Meis homeobox 2 isoform f MEIS1 0.062 Meis homeobox 1 MEIS2 0.062 Meis homeobox 2 isoform g MEIS2 0.062 Meis homeobox 2 isoform a MEIS2 0.062 Meis homeobox 2 isoform c IRX4 0.045 iroquois homeobox 4 MKX 0.044 mohawk homeobox MEIS3 0.043 Meis1, myeloid ecotropic viral integration site 1 ho... IRX6 0.043 iroquois homeobox protein 6 IRX3 0.040 iroquois homeobox 3 IRX1 0.040 iroquois homeobox protein 1 PBX4 0.038 pre-B-cell leukemia homeobox 4 IRX5 0.038 iroquois homeobox protein 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.