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Search of human proteins with 5730041
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5730041 suppressor of G2 allele of SKP1 isoform b [Homo
sapiens]
(333 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5730041 suppressor of G2 allele of SKP1 isoform b [Homo sapiens] 674 0.0
gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo sap... 655 0.0
gi|7656952 calcyclin binding protein isoform 1 [Homo sapiens] 55 9e-08
gi|60218913 calcyclin binding protein isoform 2 [Homo sapiens] 55 9e-08
gi|170784869 tetratricopeptide repeat domain 13 isoform b [Homo ... 54 1e-07
gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo ... 54 1e-07
gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... 52 6e-07
gi|4506921 small glutamine-rich tetratricopeptide [Homo sapiens] 50 3e-06
gi|24308141 small glutamine-rich tetratricopeptide repeat (TPR)-... 50 3e-06
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 49 5e-06
gi|221316570 cysteine and histidine-rich domain-containing prote... 48 1e-05
gi|221316566 cysteine and histidine-rich domain-containing prote... 48 1e-05
gi|156627581 tetratricopeptide repeat domain 4 [Homo sapiens] 46 5e-05
gi|4503729 FK506 binding protein 52 [Homo sapiens] 44 3e-04
gi|21450645 tetratricopeptide repeat domain 16 [Homo sapiens] 43 4e-04
gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 42 6e-04
gi|6912438 integrin beta 1 binding protein 2 [Homo sapiens] 41 0.002
gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens] 40 0.004
gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens] 39 0.005
gi|56181387 STIP1 homology and U-box containing protein 1 [Homo ... 39 0.006
gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Hom... 39 0.006
gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Hom... 39 0.006
gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Hom... 39 0.006
gi|57529246 ubiquitin thioesterase 19 [Homo sapiens] 39 0.008
gi|22095349 WD and tetratricopeptide repeats 1 [Homo sapiens] 38 0.014
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens] 38 0.014
gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 38 0.014
gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 38 0.014
gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Hom... 38 0.014
gi|189571679 NudC domain containing 1 isoform 2 [Homo sapiens] 37 0.019
>gi|5730041 suppressor of G2 allele of SKP1 isoform b [Homo sapiens]
Length = 333
Score = 674 bits (1738), Expect = 0.0
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGN 60
MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGN
Sbjct: 1 MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGN 60
Query: 61 YCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLDSADANFSVWIK 120
YCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLDSADANFSVWIK
Sbjct: 61 YCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLDSADANFSVWIK 120
Query: 121 RCQEAQNGSESEVWTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKL 180
RCQEAQNGSESEVWTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKL
Sbjct: 121 RCQEAQNGSESEVWTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKL 180
Query: 181 PSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVAD 240
PSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVAD
Sbjct: 181 PSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVAD 240
Query: 241 VKNLYPSSSPYTRNWDKLVGEIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSF 300
VKNLYPSSSPYTRNWDKLVGEIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSF
Sbjct: 241 VKNLYPSSSPYTRNWDKLVGEIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSF 300
Query: 301 MESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY 333
MESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY
Sbjct: 301 MESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY 333
>gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo
sapiens]
Length = 365
Score = 655 bits (1691), Expect = 0.0
Identities = 332/365 (90%), Positives = 332/365 (90%), Gaps = 32/365 (8%)
Query: 1 MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGN 60
MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGN
Sbjct: 1 MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGN 60
Query: 61 YCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLD----------- 109
YCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLD
Sbjct: 61 YCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLDIETGFHRVGQA 120
Query: 110 ---------------------SADANFSVWIKRCQEAQNGSESEVWTHQSKIKYDWYQTE 148
ADANFSVWIKRCQEAQNGSESEVWTHQSKIKYDWYQTE
Sbjct: 121 GLQLLTSSDPPALDSQSAGITGADANFSVWIKRCQEAQNGSESEVWTHQSKIKYDWYQTE 180
Query: 149 SQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLST 208
SQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLST
Sbjct: 181 SQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLST 240
Query: 209 KIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDKLVGEIKEEEKN 268
KIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDKLVGEIKEEEKN
Sbjct: 241 KIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDKLVGEIKEEEKN 300
Query: 269 EKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDM 328
EKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDM
Sbjct: 301 EKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDM 360
Query: 329 EWKKY 333
EWKKY
Sbjct: 361 EWKKY 365
>gi|7656952 calcyclin binding protein isoform 1 [Homo sapiens]
Length = 228
Score = 55.1 bits (131), Expect = 9e-08
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 38/170 (22%)
Query: 142 YDWYQTESQVVITLMIKNVQK---NDVNVEFSEKELSALVKLPSGEDYNLKL-ELLHPII 197
Y W Q++ V I + + V + +V V F+E+ LVK +G+ Y++ + LL PI
Sbjct: 78 YGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPIS 137
Query: 198 PEQSTFKV-LSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWD 256
E S+ KV T + + KK E RW+ L
Sbjct: 138 VEGSSKKVKTDTVLILCRKKVENTRWDYL------------------------------T 167
Query: 257 KLVGEIKEEEK---NEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMES 303
++ E KE+EK + + + L + ++IY DG D++KR +NK+++ES
Sbjct: 168 QVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVES 217
>gi|60218913 calcyclin binding protein isoform 2 [Homo sapiens]
Length = 185
Score = 55.1 bits (131), Expect = 9e-08
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 38/170 (22%)
Query: 142 YDWYQTESQVVITLMIKNVQK---NDVNVEFSEKELSALVKLPSGEDYNLKL-ELLHPII 197
Y W Q++ V I + + V + +V V F+E+ LVK +G+ Y++ + LL PI
Sbjct: 35 YGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPIS 94
Query: 198 PEQSTFKV-LSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWD 256
E S+ KV T + + KK E RW+ L
Sbjct: 95 VEGSSKKVKTDTVLILCRKKVENTRWDYL------------------------------T 124
Query: 257 KLVGEIKEEEK---NEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMES 303
++ E KE+EK + + + L + ++IY DG D++KR +NK+++ES
Sbjct: 125 QVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVES 174
>gi|170784869 tetratricopeptide repeat domain 13 isoform b [Homo
sapiens]
Length = 807
Score = 54.3 bits (129), Expect = 1e-07
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 30 ALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICE 89
A+ +LTKA++ +P A+ Y R + + +Y A D ++SLELN N AML KG+
Sbjct: 182 AVNDLTKAIQLQPS-ARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 240
Query: 90 YHEKNYAAALETFTEG--QKLDSADA 113
+H A+E+F E QK+D DA
Sbjct: 241 FHRGLLKEAIESFKEALKQKVDFIDA 266
Score = 40.0 bits (92), Expect = 0.003
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 30 ALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICE 89
A+E +AL+QK D Y + LGN+ A +K+L LN N+ + +G+
Sbjct: 249 AIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMML 308
Query: 90 YHEKNYAAALETFTEGQKLD 109
YH + AL+ F +L+
Sbjct: 309 YHHGSLQEALKNFKRCLQLE 328
>gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo
sapiens]
Length = 860
Score = 54.3 bits (129), Expect = 1e-07
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 30 ALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICE 89
A+ +LTKA++ +P A+ Y R + + +Y A D ++SLELN N AML KG+
Sbjct: 235 AVNDLTKAIQLQPS-ARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTF 293
Query: 90 YHEKNYAAALETFTEG--QKLDSADA 113
+H A+E+F E QK+D DA
Sbjct: 294 FHRGLLKEAIESFKEALKQKVDFIDA 319
Score = 40.0 bits (92), Expect = 0.003
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 30 ALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICE 89
A+E +AL+QK D Y + LGN+ A +K+L LN N+ + +G+
Sbjct: 302 AIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMML 361
Query: 90 YHEKNYAAALETFTEGQKLD 109
YH + AL+ F +L+
Sbjct: 362 YHHGSLQEALKNFKRCLQLE 381
Score = 37.4 bits (85), Expect = 0.019
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 25 EDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLR 84
++ + AL EL++ + +PD + + QRA LG AV D K+++L P ++
Sbjct: 196 KNAELALFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRH 254
Query: 85 KGICEYHEKNYAAALETFTEGQKLD 109
+G + ++YA A E F + +L+
Sbjct: 255 RGTLYFISEDYATAHEDFQQSLELN 279
>gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
protein) [Homo sapiens]
Length = 543
Score = 52.4 bits (124), Expect = 6e-07
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 26 DPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRK 85
D A++ T+A+++ P DA+ Y RA C+ L + +A+ D ++ ++L P RK
Sbjct: 375 DYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRK 434
Query: 86 GICEYHEKNYAAALETFTEGQKLDSADANFSVWIKRCQEAQ-NGSES-EVWTHQSKIKYD 143
K+Y A++ + + LDS+ + +RC AQ N +S E ++ +
Sbjct: 435 AAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYNRHDSPEDVKRRAMADPE 494
Query: 144 WYQTESQVVITLMIKNVQKN 163
Q S + L+++ +QK+
Sbjct: 495 VQQIMSDPAMRLILEQMQKD 514
Score = 32.0 bits (71), Expect = 0.79
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 30 ALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICE 89
AL+ ++A++ P + Y R+ + G+Y A D K+++L P+ RK
Sbjct: 23 ALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82
Query: 90 YHEKNYAAALETFTEGQK 107
+ A T+ EG K
Sbjct: 83 EFLNRFEEAKRTYEEGLK 100
>gi|4506921 small glutamine-rich tetratricopeptide [Homo sapiens]
Length = 313
Score = 50.1 bits (118), Expect = 3e-06
Identities = 30/113 (26%), Positives = 58/113 (51%)
Query: 8 TATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVAD 67
+A ++R ++ + E+ +AA+ KA+E P +A Y+C RA + LGNY AV D
Sbjct: 88 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQD 147
Query: 68 AKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLDSADANFSVWIK 120
++++ ++P S A R G+ + A+ + + +LD + + +K
Sbjct: 148 CERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLK 200
>gi|24308141 small glutamine-rich tetratricopeptide repeat
(TPR)-containing, beta [Homo sapiens]
Length = 304
Score = 50.1 bits (118), Expect = 3e-06
Identities = 27/101 (26%), Positives = 54/101 (53%)
Query: 24 DEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAML 83
+E+ AA++ T+A+E P++A YYC RA LG+Y A+ D +K++ ++ S A
Sbjct: 98 EENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYG 157
Query: 84 RKGICEYHEKNYAAALETFTEGQKLDSADANFSVWIKRCQE 124
R G+ + A+ ++ + LD + ++ +K ++
Sbjct: 158 RMGLALTALNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQ 198
Score = 28.9 bits (63), Expect = 6.7
Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Query: 9 ATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADA 68
A SQ + F+ + D + L+ ++ + A H+ NY AV
Sbjct: 53 AVSQPLTEMFTSSFCKND----VLPLSNSVPEDVGKADQLKDEGNNHMKEENYAAAVDCY 108
Query: 69 KKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLDSADANFSVWIKRCQEAQNG 128
+++EL+PNN+ + + +Y A++ + +DS + + A N
Sbjct: 109 TQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNK 168
Query: 129 SESEVWTHQSKIKYD 143
E V ++Q + D
Sbjct: 169 FEEAVTSYQKALDLD 183
>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
[Homo sapiens]
Length = 494
Score = 49.3 bits (116), Expect = 5e-06
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 25 EDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLR 84
+D A TKA++ P +A YY RA ++LG + A+ DA++S+ L+ + LR
Sbjct: 42 KDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLR 101
Query: 85 KGICEYHEKNYAAALETFTEGQKLDSADA 113
+G C N AA +F +LD +A
Sbjct: 102 EGKCHLSLGNAMAACRSFQRALELDHKNA 130
Score = 38.1 bits (87), Expect = 0.011
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 34 LTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEK 93
+ +ALE P ++ +A C +LG Y A + A L ++ N+ A+ +G+C Y+E
Sbjct: 165 MDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYED 224
Query: 94 NYAAALETFTEGQKL 108
A++ F + ++
Sbjct: 225 CIEKAVQFFVQALRM 239
>gi|221316570 cysteine and histidine-rich domain-containing protein
1 isoform b [Homo sapiens]
Length = 313
Score = 48.1 bits (113), Expect = 1e-05
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 87 ICEYHEKNYAAALETFTEGQKLDSA----DANFSVWIKRCQEAQNGSES--EVWTHQSKI 140
+C YH + + F EG K S ++F+ ++ AQ G +WT +
Sbjct: 156 VCVYH-----SGVPIFHEGMKYWSCCRRKTSDFNTFL-----AQEGCTKGKHMWTKKDAG 205
Query: 141 K------YDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLH 194
K +DW+QT +V I++ KN VE + L+ + ++++ ++L
Sbjct: 206 KKVVPCRHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWG 265
Query: 195 PIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 226
I ++S + +TKIEI ++K E ++W LE
Sbjct: 266 VIDVKRSYVTMTATKIEITMRKAEPMQWASLE 297
>gi|221316566 cysteine and histidine-rich domain-containing protein
1 isoform a [Homo sapiens]
Length = 332
Score = 48.1 bits (113), Expect = 1e-05
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 87 ICEYHEKNYAAALETFTEGQKLDSA----DANFSVWIKRCQEAQNGSES--EVWTHQSKI 140
+C YH + + F EG K S ++F+ ++ AQ G +WT +
Sbjct: 175 VCVYH-----SGVPIFHEGMKYWSCCRRKTSDFNTFL-----AQEGCTKGKHMWTKKDAG 224
Query: 141 K------YDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLH 194
K +DW+QT +V I++ KN VE + L+ + ++++ ++L
Sbjct: 225 KKVVPCRHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWG 284
Query: 195 PIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 226
I ++S + +TKIEI ++K E ++W LE
Sbjct: 285 VIDVKRSYVTMTATKIEITMRKAEPMQWASLE 316
>gi|156627581 tetratricopeptide repeat domain 4 [Homo sapiens]
Length = 387
Score = 45.8 bits (107), Expect = 5e-05
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 19 SDALIDEDPQAALEELTKALEQK---PD-DAQYYCQRAYCHILLGNYCVAVADAKKSLEL 74
+D ++D + A+ T+ L++K PD +A Y RA LGN+ A+ D + +L
Sbjct: 87 NDYFKEKDYKKAVISYTEGLKKKCADPDLNAVLYTNRAAAQYYLGNFRSALNDVTAARKL 146
Query: 75 NPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLDSADANFSVWIKRCQEAQNGSESEVW 134
P + A++R +C K++A A+ EG ++D+ + + + + + +V
Sbjct: 147 KPCHLKAIIRGALCHLELKHFAEAVNWCDEGLQIDAKEKKLLEMRAKADKLKRIEQRDVR 206
Query: 135 THQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKL 180
K K + Q E+ ++ + +N++ ++ E + L +L
Sbjct: 207 KANLKEKKERNQNEA-LLQAIKARNIRLSEAACEDEDSASEGLGEL 251
>gi|4503729 FK506 binding protein 52 [Homo sapiens]
Length = 459
Score = 43.5 bits (101), Expect = 3e-04
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 29 AALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGIC 88
AA+E KALE ++ + +R H+ + ++ +A AD +K L+L PNN A + +C
Sbjct: 337 AAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 396
Query: 89 EY--------HEKNYAAALETFTEGQKLDSADAN 114
+ +K YA E E + A+A+
Sbjct: 397 QQRIRRQLAREKKLYANMFERLAEEENKAKAEAS 430
Score = 33.5 bits (75), Expect = 0.27
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 52 AYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLDSA 111
A CH+ L + A+ K+LEL+ NN + R+G ++ A F + +L
Sbjct: 326 AMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPN 385
Query: 112 DANFSVWIKRCQE 124
+ + CQ+
Sbjct: 386 NKAAKTQLAVCQQ 398
>gi|21450645 tetratricopeptide repeat domain 16 [Homo sapiens]
Length = 873
Score = 42.7 bits (99), Expect = 4e-04
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 37/198 (18%)
Query: 17 SFSDALIDEDPQAALEE----LTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSL 72
+++D + Q A +E L KAL + + Y R C LGN A AD +++L
Sbjct: 333 TYNDFAVHCYRQGAYQEGVLLLNKALRDEQQEKGLYINRGDCFFQLGNLAFAEADYQQAL 392
Query: 73 ELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKLDSADANFSVWIKRCQEAQNGSESE 132
L+P + A R G+ + EK F E ++ K+ Q+A+N +
Sbjct: 393 ALSPQDEGANTRMGLLQ--EK------MGFCEQRR------------KQFQKAENHFSTA 432
Query: 133 VWTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLEL 192
+ + K +Y Y+ +S+ +++N+ F ++ A V L + + L L L
Sbjct: 433 IRHNPQKAQYYLYRAKSR----QLLQNI--------FGARQDVATVLLLNPKQPKLSL-L 479
Query: 193 LHPIIPEQSTFKVLSTKI 210
+ + P S +VLST+I
Sbjct: 480 MTNLFPGMSVEEVLSTQI 497
>gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 2
[Homo sapiens]
Length = 438
Score = 42.4 bits (98), Expect = 6e-04
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 42 PDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALET 101
P +A YY RA ++LG + A+ DA++S+ L+ + LR+G C N AA +
Sbjct: 3 PKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRS 62
Query: 102 FTEGQKLDSADA 113
F +LD +A
Sbjct: 63 FQRALELDHKNA 74
Score = 38.1 bits (87), Expect = 0.011
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 34 LTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEK 93
+ +ALE P ++ +A C +LG Y A + A L ++ N+ A+ +G+C Y+E
Sbjct: 109 MDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYED 168
Query: 94 NYAAALETFTEGQKL 108
A++ F + ++
Sbjct: 169 CIEKAVQFFVQALRM 183
>gi|6912438 integrin beta 1 binding protein 2 [Homo sapiens]
Length = 347
Score = 40.8 bits (94), Expect = 0.002
Identities = 24/86 (27%), Positives = 46/86 (53%)
Query: 141 KYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQ 200
++DW+QT+S VV+T+ + V+ S+ EL + + +++L I EQ
Sbjct: 219 RHDWHQTDSLVVVTVYGQIPLPAFNWVKASQTELHVHIVFDGNRVFQAQMKLWGVINVEQ 278
Query: 201 STFKVLSTKIEIKLKKPEAVRWEKLE 226
S+ ++ +++EI L K + W +LE
Sbjct: 279 SSVFLMPSRVEISLVKADPGSWAQLE 304
>gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens]
Length = 519
Score = 39.7 bits (91), Expect = 0.004
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 35 TKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLR--KGICEYHE 92
T+AL+ P D + + R++CH LG A+ADA+ +L L P + R K +
Sbjct: 329 TQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRPGWPRGLFRLGKALMGLQR 388
Query: 93 KNYAAAL--ETFTEGQKLDSADANFSVWIKRCQEAQNG 128
AAA+ ET G + D+A S + + Q G
Sbjct: 389 FREAAAVFQETLRGGSQPDAARELRSCLLHLTLQGQRG 426
>gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens]
Length = 349
Score = 39.3 bits (90), Expect = 0.005
Identities = 24/73 (32%), Positives = 32/73 (43%)
Query: 27 PQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKG 86
PQ A + + LE++P + +R LGN A AD KK L ++P N A G
Sbjct: 268 PQLAAQSCDRVLEREPGHLKALYRRGVAQAALGNLEKATADLKKVLAIDPKNRAAQEELG 327
Query: 87 ICEYHEKNYAAAL 99
KN A L
Sbjct: 328 KVVIQGKNQDAGL 340
Score = 28.9 bits (63), Expect = 6.7
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 42 PDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICE 89
P+ + A C +LLG +A + LE P + A+ R+G+ +
Sbjct: 249 PERTVLHANLAACQLLLGQPQLAAQSCDRVLEREPGHLKALYRRGVAQ 296
>gi|56181387 STIP1 homology and U-box containing protein 1 [Homo
sapiens]
Length = 303
Score = 38.9 bits (89), Expect = 0.006
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 36 KALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNY 95
+A+ + P A YY RA C++ + + A+AD +++LEL+ + A G C+ ++Y
Sbjct: 51 RAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESY 110
Query: 96 AAALETFTEGQKL 108
A+ L
Sbjct: 111 DEAIANLQRAYSL 123
>gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Homo
sapiens]
Length = 381
Score = 38.9 bits (89), Expect = 0.006
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 142 YDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQS 201
Y W QT++ V ++L +K V D +V +E L V P + + L PI E S
Sbjct: 8 YSWQQTKTAVFLSLPLKGVCVRDTDVFCTENYLK--VNFP---PFLFEAFLYAPIDDESS 62
Query: 202 TFKVLSTKIEIKLKKPEAVRWEKLEGQG 229
K+ + I L K EA WE L G
Sbjct: 63 KAKIGNDTIVFTLYKKEAAMWETLSVTG 90
>gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Homo
sapiens]
Length = 376
Score = 38.9 bits (89), Expect = 0.006
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 142 YDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQS 201
Y W QT++ V ++L +K V D +V +E L V P + + L PI E S
Sbjct: 8 YSWQQTKTAVFLSLPLKGVCVRDTDVFCTENYLK--VNFP---PFLFEAFLYAPIDDESS 62
Query: 202 TFKVLSTKIEIKLKKPEAVRWEKLEGQG 229
K+ + I L K EA WE L G
Sbjct: 63 KAKIGNDTIVFTLYKKEAAMWETLSVTG 90
>gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Homo
sapiens]
Length = 420
Score = 38.9 bits (89), Expect = 0.006
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 142 YDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQS 201
Y W QT++ V ++L +K V D +V +E L V P + + L PI E S
Sbjct: 8 YSWQQTKTAVFLSLPLKGVCVRDTDVFCTENYLK--VNFP---PFLFEAFLYAPIDDESS 62
Query: 202 TFKVLSTKIEIKLKKPEAVRWEKLEGQG 229
K+ + I L K EA WE L G
Sbjct: 63 KAKIGNDTIVFTLYKKEAAMWETLSVTG 90
Score = 34.7 bits (78), Expect = 0.12
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
Query: 25 EDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLEL-------NPN 77
E+ AA+ A+ Y RA CH+ L N A+ D+ K+LEL N N
Sbjct: 304 ENYLAAINAYNLAIRLNNKMPLLYLNRAACHLKLKNLHKAIEDSSKALELLMPPVTDNAN 363
Query: 78 -NSTAMLRKGICEYHEKNYAAALETFTEGQKLDSADANFSVWIKRCQEAQNGSE 130
A +R+G + Y L+ + K+D ++ + ++ + G+E
Sbjct: 364 ARMKAHVRRGTAFCQLELYVEGLQDYEAALKIDPSNKIVQIDAEKIRNVIQGTE 417
>gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]
Length = 1318
Score = 38.5 bits (88), Expect = 0.008
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 130 ESEVWTHQSKIKYDWYQT-ESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNL 188
E E + + +K D Y+ VV+ + +K + ++ V F E++ + + + G L
Sbjct: 275 EPESMVNLAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRL 334
Query: 189 ------------KLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 226
+++L + I PEQ TF +++I+I L+K ++ RW LE
Sbjct: 335 HPGCGPHTTFRWQVKLRNLIEPEQCTFCFTASRIDICLRKRQSQRWGGLE 384
>gi|22095349 WD and tetratricopeptide repeats 1 [Homo sapiens]
Length = 676
Score = 37.7 bits (86), Expect = 0.014
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 12 QRFFQSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILL---GNYCVAVADA 68
+R Q ++A + A++ +KA+++ P +A Y RA ++ G++ A+ D
Sbjct: 362 ERVKQQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALRDC 421
Query: 69 KKSLELNPNNSTAMLRKGICEYHEKNYAAALE 100
K++ LNP + A R C + K A ALE
Sbjct: 422 LKAISLNPCHLKAHFRLARCLFELKYVAEALE 453
>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
Length = 2481
Score = 37.7 bits (86), Expect = 0.014
Identities = 26/91 (28%), Positives = 40/91 (43%)
Query: 19 SDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNN 78
+ A D D A+ +AL P + Y R+ ++ + Y A+ DA K+ LNP
Sbjct: 66 NQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARLLNPKW 125
Query: 79 STAMLRKGICEYHEKNYAAALETFTEGQKLD 109
A R+G+ + +A AL F G D
Sbjct: 126 PKAYFRQGVALQYLGRHADALAAFASGLAQD 156
>gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 37.7 bits (86), Expect = 0.014
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 29 AALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGIC 88
AA++++ A++ A++ R H +G+ A+ D + ++ LNP S A G
Sbjct: 1427 AAMQDINAAMKISTT-AEFLTNRGVIHEFMGHKQNAMKDYQDAITLNPKYSLAYFNAGNI 1485
Query: 89 EYHEKNYAAALETFTEGQKLD 109
+H + ++ A + F++ K D
Sbjct: 1486 YFHHRQFSQASDYFSKALKFD 1506
Score = 32.0 bits (71), Expect = 0.79
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 28 QAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNS 79
+ A E+ +E P A Y RA+ + L Y +A D K+L L PN++
Sbjct: 1527 EEAKEDFANVIESCPFWAAVYFNRAHFYYCLKQYELAEEDLNKALSLKPNDA 1578
Score = 30.8 bits (68), Expect = 1.8
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 28 QAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLEL 74
+ A E+L KAL KP+DA Y RA +G A+AD ++L+L
Sbjct: 1561 ELAEEDLNKALSLKPNDALVYNFRAKVRGKIGLIEEAMADYNQALDL 1607
>gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 37.7 bits (86), Expect = 0.014
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 29 AALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGIC 88
AA++++ A++ A++ R H +G+ A+ D + ++ LNP S A G
Sbjct: 1427 AAMQDINAAMKISTT-AEFLTNRGVIHEFMGHKQNAMKDYQDAITLNPKYSLAYFNAGNI 1485
Query: 89 EYHEKNYAAALETFTEGQKLD 109
+H + ++ A + F++ K D
Sbjct: 1486 YFHHRQFSQASDYFSKALKFD 1506
Score = 32.0 bits (71), Expect = 0.79
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 28 QAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNS 79
+ A E+ +E P A Y RA+ + L Y +A D K+L L PN++
Sbjct: 1527 EEAKEDFANVIESCPFWAAVYFNRAHFYYCLKQYELAEEDLNKALSLKPNDA 1578
Score = 30.8 bits (68), Expect = 1.8
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 28 QAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLEL 74
+ A E+L KAL KP+DA Y RA +G A+AD ++L+L
Sbjct: 1561 ELAEEDLNKALSLKPNDALVYNFRAKVRGKIGLIEEAMADYNQALDL 1607
>gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Homo
sapiens]
Length = 1614
Score = 37.7 bits (86), Expect = 0.014
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 29 AALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGIC 88
AA++++ A++ A++ R H +G+ A+ D + ++ LNP S A G
Sbjct: 1427 AAMQDINAAMKISTT-AEFLTNRGVIHEFMGHKQNAMKDYQDAITLNPKYSLAYFNAGNI 1485
Query: 89 EYHEKNYAAALETFTEGQKLD 109
+H + ++ A + F++ K D
Sbjct: 1486 YFHHRQFSQASDYFSKALKFD 1506
Score = 32.0 bits (71), Expect = 0.79
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 28 QAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNS 79
+ A E+ +E P A Y RA+ + L Y +A D K+L L PN++
Sbjct: 1527 EEAKEDFANVIESCPFWAAVYFNRAHFYYCLKQYELAEEDLNKALSLKPNDA 1578
Score = 30.8 bits (68), Expect = 1.8
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 28 QAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLEL 74
+ A E+L KAL KP+DA Y RA +G A+AD ++L+L
Sbjct: 1561 ELAEEDLNKALSLKPNDALVYNFRAKVRGKIGLIEEAMADYNQALDL 1607
>gi|189571679 NudC domain containing 1 isoform 2 [Homo sapiens]
Length = 554
Score = 37.4 bits (85), Expect = 0.019
Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 77 NNSTAMLRKGICEYHEKNYAAALETFTEGQKLDSADANFSVWIKRCQEAQNGSESEVWTH 136
N ++++ I + AA+E +G L +++ Q+ + + ++
Sbjct: 186 NKKYEIIKRDILRGKSVPHYAAIEP--DGNGLMIVSYKSLTFVQAGQDLEENMDEDISEK 243
Query: 137 QSKIKYDWYQTESQVVITLMI-KNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHP 195
+ Y W QTE + +T+ + ++ K D+ ++F ++ ++K + L+ +L
Sbjct: 244 IKEPLYYWQQTEDDLTVTIRLPEDSTKEDIQIQFLPDHINIVLK----DHQFLEGKLYSS 299
Query: 196 IIPEQSTFKVL-STKIEIKL-KKPEAVRWEKL 225
I E ST+ + S +EI L KK E + W +L
Sbjct: 300 IDHESSTWIIKESNSLEISLIKKNEGLTWPEL 331
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,788,483
Number of Sequences: 37866
Number of extensions: 549131
Number of successful extensions: 1448
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1299
Number of HSP's gapped (non-prelim): 163
length of query: 333
length of database: 18,247,518
effective HSP length: 103
effective length of query: 230
effective length of database: 14,347,320
effective search space: 3299883600
effective search space used: 3299883600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.