Guide to the Human Genome
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Name: DBF4 Sequence: fasta or formatted (674aa) NCBI GI: 5729734
Description:

activator of S phase kinase

Referenced in:

Additional Cell Cycle Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5         17           1
 C cysteine            1.9         13           2
 D aspartate           6.2         42           2
 E glutamate           8.0         54           3
 F phenylalanine       4.5         30           2
 G glycine             4.3         29           2
 H histidine           2.8         19           1
 I isoleucine          5.5         37           2
 K lysine             11.3         76           4
 L leucine             9.1         61           2
 M methionine          1.2          8           1
 N asparagine          4.5         30           1
 P proline             4.9         33           2
 Q glutamine           5.5         37           1
 R arginine            3.4         23           1
 S serine             10.8         73           2
 T threonine           5.8         39           2
 V valine              4.7         32           2
 W tryptophan          0.4          3           1
 Y tyrosine            2.7         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activator of S phase kinase 
DBF4B                 0.117   DBF4 homolog B isoform 1 
DBF4B                 0.040   DBF4 homolog B isoform 2 
ZDBF2                 0.019   zinc finger, DBF-type containing 2 
CLIP1                 0.015   restin isoform b 
CLIP1                 0.015   restin isoform a 
KIAA1009              0.014   KIAA1009 protein 
MTSS1                 0.012   metastasis suppressor 1 
RNF20                 0.011   ring finger protein 20 
AKAP5                 0.011   A-kinase anchor protein 5 
CEP164                0.010   centrosomal protein 164kDa 
CENPE                 0.010   centromere protein E 
AKAP9                 0.010   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.010   A-kinase anchor protein 9 isoform 3 
CALCOCO2              0.009   calcium binding and coiled-coil domain 2 
KIF15                 0.009   kinesin family member 15 
CNTLN                 0.009   centlein isoform 1 
PLCB1                 0.008   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.008   phosphoinositide-specific phospholipase C beta 1 iso...
KIF5C                 0.008   kinesin family member 5C 
RAI14                 0.008   retinoic acid induced 14 isoform d 
RAI14                 0.008   retinoic acid induced 14 isoform c 
RAI14                 0.008   retinoic acid induced 14 isoform b 
RAI14                 0.008   retinoic acid induced 14 isoform a 
RAI14                 0.008   retinoic acid induced 14 isoform a 
RAI14                 0.008   retinoic acid induced 14 isoform a 
ITSN2                 0.008   intersectin 2 isoform 3 
HMMR                  0.007   hyaluronan-mediated motility receptor isoform d [Ho...
HMMR                  0.007   hyaluronan-mediated motility receptor isoform a [Ho...
HMMR                  0.007   hyaluronan-mediated motility receptor isoform c [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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