Guide to the Human Genome
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Name: C14orf37 Sequence: fasta or formatted (774aa) NCBI GI: 56711320
Description:

hypothetical protein LOC145407

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         53           3
 C cysteine            0.4          3           1
 D aspartate           5.9         46           2
 E glutamate          12.4         96           4
 F phenylalanine       2.8         22           2
 G glycine             6.3         49           2
 H histidine           1.2          9           1
 I isoleucine          3.1         24           2
 K lysine              4.0         31           1
 L leucine             8.3         64           3
 M methionine          3.4         26           3
 N asparagine          2.7         21           1
 P proline             6.3         49           2
 Q glutamine           4.8         37           2
 R arginine            3.4         26           4
 S serine              9.6         74           2
 T threonine          10.2         79           2
 V valine              6.7         52           2
 W tryptophan          0.6          5           1
 Y tyrosine            1.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC145407 
LOC729792             0.025   PREDICTED: hypothetical protein 
LOC729792             0.025   PREDICTED: hypothetical protein 
LOC729792             0.025   PREDICTED: hypothetical protein 
LOC100294501          0.025   PREDICTED: hypothetical protein 
LOC100294249          0.025   PREDICTED: hypothetical protein XP_002344067 
LOC100294238          0.025   PREDICTED: hypothetical protein 
LOC100294204          0.025   PREDICTED: hypothetical protein 
LOC100294136          0.025   PREDICTED: hypothetical protein 
LOC100294091          0.025   PREDICTED: hypothetical protein 
LOC730401             0.025   PREDICTED: hypothetical protein 
MUC17                 0.023   mucin 17 
MUC12                 0.020   PREDICTED: mucin 12 
MUC12                 0.020   PREDICTED: mucin 12, cell surface associated 
PELP1                 0.019   proline, glutamic acid and leucine rich protein 1 [...
TTBK1                 0.019   tau tubulin kinase 1 
NCL                   0.019   nucleolin 
MYT1                  0.018   myelin transcription factor 1 
MYST4                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
MUC3A                 0.018   PREDICTED: mucin 3A, cell surface associated, parti...
RYR1                  0.018   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.018   skeletal muscle ryanodine receptor isoform 1 
UBTF                  0.018   upstream binding transcription factor, RNA polymera...
UBTF                  0.018   upstream binding transcription factor, RNA polymera...
UBTF                  0.018   upstream binding transcription factor, RNA polymerase...
CASZ1                 0.018   castor homolog 1, zinc finger isoform a 
ANP32A                0.017   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
ANP32B                0.017   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
RANGAP1               0.017   Ran GTPase activating protein 1 
HMGB1                 0.017   high-mobility group box 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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