WDHD1 33127

Name: WDHD1	Sequence: fasta or formatted (1006aa)		NCBI GI: 56550086
Description: WD repeat and HMG-box DNA binding protein 1 isoform 2		Referenced in: Nonhistone Chromosomal Proteins WD Repeat Proteins
Other entries for this name: alt prot [1129aa] WD repeat and HMG-box DNA binding protein 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 68 4 C cysteine 2.3 23 1 D aspartate 5.9 59 2 E glutamate 8.5 86 7 F phenylalanine 3.5 35 1 G glycine 5.5 55 2 H histidine 2.4 24 2 I isoleucine 5.3 53 2 K lysine 7.5 75 4 L leucine 8.5 86 3 M methionine 1.9 19 2 N asparagine 5.5 55 2 P proline 4.6 46 2 Q glutamine 4.7 47 2 R arginine 4.3 43 2 S serine 9.8 99 3 T threonine 5.1 51 2 V valine 4.5 45 2 W tryptophan 1.8 18 1 Y tyrosine 1.9 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD repeat and HMG-box DNA binding protein 1 isoform ... WDHD1 1.000 WD repeat and HMG-box DNA binding protein 1 isoform 1... TBL1X 0.017 transducin beta-like 1X isoform b TBL1X 0.017 transducin beta-like 1X isoform b TBL1X 0.017 transducin beta-like 1X isoform a TBL1X 0.017 transducin beta-like 1X isoform a TBL1Y 0.017 transducin beta-like 1Y TBL1Y 0.017 transducin beta-like 1Y TBL1Y 0.017 transducin beta-like 1Y ATG16L1 0.016 APG16 autophagy 16-like isoform 1 ATG16L1 0.016 APG16 autophagy 16-like isoform 2 TBL1XR1 0.015 transducin (beta)-like 1 X-linked receptor 1 DMP1 0.015 dentin matrix acidic phosphoprotein 1 isoform 1 precu... DMP1 0.015 dentin matrix acidic phosphoprotein 1 isoform 2 pre... WDR51B 0.015 WD repeat domain 51B SSRP1 0.013 structure specific recognition protein 1 SMU1 0.013 smu-1 suppressor of mec-8 and unc-52 homolog WDR5 0.013 WD repeat domain 5 WDR5 0.013 WD repeat domain 5 WDR51A 0.013 WD repeat domain 51A isoform 3 WDR51A 0.013 WD repeat domain 51A isoform 2 WDR51A 0.013 WD repeat domain 51A isoform 1 CIAO1 0.012 WD repeat domain 39 TNRC18 0.011 trinucleotide repeat containing 18 TAF5 0.011 TBP-associated factor 5 PAFAH1B1 0.011 platelet-activating factor acetylhydrolase, isoform I... KATNB1 0.011 katanin p80 subunit B 1 ATRX 0.010 transcriptional regulator ATRX isoform 2 ATRX 0.010 transcriptional regulator ATRX isoform 1 MAP9 0.010 aster-associated protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.