Guide to the Human Genome
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Search of human proteins with 5454146

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
         (207 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]         424   e-119
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]          424   e-119
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]         356   9e-99
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa...   322   1e-88
gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo s...   277   5e-75
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa...   201   3e-52
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]          201   3e-52
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s...   201   3e-52
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   201   4e-52
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   201   4e-52
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   201   4e-52
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   201   4e-52
gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   201   4e-52
gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   201   4e-52
gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sa...   201   4e-52
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s...   200   6e-52
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s...   197   4e-51
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s...   167   4e-42
gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]            130   8e-31
gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]            118   3e-27
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]            117   9e-27
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap...   115   3e-26
gi|61175265 ubiquitin-conjugating enzyme E2N-like [Homo sapiens]      112   3e-25
gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo sapi...   108   3e-24
gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo sa...   102   2e-22
gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo sapi...   101   5e-22
gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens]         100   9e-22
gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo sa...    98   6e-21
gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo s...    97   1e-20
gi|35494003 ubiquitin-conjugating enzyme E2I [Homo sapiens]            96   3e-20

>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
          Length = 207

 Score =  424 bits (1089), Expect = e-119
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MSSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLS 60
           MSSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLS
Sbjct: 1   MSSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLS 60

Query: 61  TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDY 120
           TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDY
Sbjct: 61  TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDY 120

Query: 121 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180
           PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV
Sbjct: 121 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180

Query: 181 GSIATQYLTNRAEHDRIARQWTKRYAT 207
           GSIATQYLTNRAEHDRIARQWTKRYAT
Sbjct: 181 GSIATQYLTNRAEHDRIARQWTKRYAT 207


>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
          Length = 207

 Score =  424 bits (1089), Expect = e-119
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MSSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLS 60
           MSSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLS
Sbjct: 1   MSSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLS 60

Query: 61  TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDY 120
           TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDY
Sbjct: 61  TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDY 120

Query: 121 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180
           PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV
Sbjct: 121 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180

Query: 181 GSIATQYLTNRAEHDRIARQWTKRYAT 207
           GSIATQYLTNRAEHDRIARQWTKRYAT
Sbjct: 181 GSIATQYLTNRAEHDRIARQWTKRYAT 207


>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
          Length = 201

 Score =  356 bits (913), Expect = 9e-99
 Identities = 176/207 (85%), Positives = 186/207 (89%), Gaps = 6/207 (2%)

Query: 1   MSSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLS 60
           MS++ QR DD SPSTS GSSD DQR+    EPE ++ +      +KK  K+SSKT AKLS
Sbjct: 1   MSTEAQRVDD-SPSTSGGSSDGDQRESVQQEPEREQVQP-----KKKEGKISSKTAAKLS 54

Query: 61  TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDY 120
           TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFS DY
Sbjct: 55  TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDY 114

Query: 121 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180
           PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV
Sbjct: 115 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 174

Query: 181 GSIATQYLTNRAEHDRIARQWTKRYAT 207
           GSIATQY+TNRAEHDR+ARQWTKRYAT
Sbjct: 175 GSIATQYMTNRAEHDRMARQWTKRYAT 201


>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
           sapiens]
          Length = 193

 Score =  322 bits (825), Expect = 1e-88
 Identities = 159/201 (79%), Positives = 175/201 (87%), Gaps = 10/201 (4%)

Query: 8   SDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLS-SKTTAKLSTSAKRI 66
           SDD+S +++S SS +            Q+  K + T +KK +K+S SK +  LSTSAKRI
Sbjct: 2   SDDDSRASTSSSSSSSSN---------QQTEKETNTPKKKESKVSMSKNSKLLSTSAKRI 52

Query: 67  QKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPK 126
           QKELA+ITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITF+ +YPFKPPK
Sbjct: 53  QKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPK 112

Query: 127 VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ 186
           VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ
Sbjct: 113 VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ 172

Query: 187 YLTNRAEHDRIARQWTKRYAT 207
           Y+TNRAEHDR+ARQWTKRYAT
Sbjct: 173 YMTNRAEHDRMARQWTKRYAT 193


>gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo
           sapiens]
          Length = 176

 Score =  277 bits (708), Expect = 5e-75
 Identities = 143/201 (71%), Positives = 158/201 (78%), Gaps = 27/201 (13%)

Query: 8   SDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLS-SKTTAKLSTSAKRI 66
           SDD+S +++S SS +            Q+  K + T +KK +K+S SK +  LSTSAK  
Sbjct: 2   SDDDSRASTSSSSSSSSN---------QQTEKETNTPKKKESKVSMSKNSKLLSTSAK-- 50

Query: 67  QKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPK 126
                          SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITF+ +YPFKPPK
Sbjct: 51  ---------------SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPK 95

Query: 127 VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ 186
           VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ
Sbjct: 96  VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ 155

Query: 187 YLTNRAEHDRIARQWTKRYAT 207
           Y+TNRAEHDR+ARQWTKRYAT
Sbjct: 156 YMTNRAEHDRMARQWTKRYAT 176


>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  201 bits (512), Expect = 3e-52
 Identities = 95/143 (66%), Positives = 113/143 (79%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           KRI KEL ++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 4   KRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A  Y T+R +++RIAR+WT++YA
Sbjct: 124 ARIYKTDREKYNRIAREWTQKYA 146


>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
          Length = 147

 Score =  201 bits (512), Expect = 3e-52
 Identities = 90/143 (62%), Positives = 116/143 (81%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           KRIQKEL+++  DPP +CSAGP GD+++ W++TI+GPP S Y+GGVFFL + F +DYPFK
Sbjct: 4   KRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFK 63

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
           PPK+ F T+IYH NINS G ICLDIL+  WSPALT+SKVLLSICSLL D NP DPLV  I
Sbjct: 64  PPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDI 123

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A  Y +++ +++R AR+WT++YA
Sbjct: 124 AQIYKSDKEKYNRHAREWTQKYA 146


>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
           sapiens]
          Length = 148

 Score =  201 bits (512), Expect = 3e-52
 Identities = 94/143 (65%), Positives = 114/143 (79%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           KRI KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A  Y T+R +++R+AR+WT++YA
Sbjct: 124 ARIYKTDRDKYNRLAREWTEKYA 146


>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  201 bits (511), Expect = 4e-52
 Identities = 94/143 (65%), Positives = 114/143 (79%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           KRI KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A  Y T+R +++RI+R+WT++YA
Sbjct: 124 ARIYKTDRDKYNRISREWTQKYA 146


>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  201 bits (511), Expect = 4e-52
 Identities = 94/143 (65%), Positives = 114/143 (79%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           KRI KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A  Y T+R +++RI+R+WT++YA
Sbjct: 124 ARIYKTDRDKYNRISREWTQKYA 146


>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  201 bits (511), Expect = 4e-52
 Identities = 94/143 (65%), Positives = 114/143 (79%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           KRI KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A  Y T+R +++RI+R+WT++YA
Sbjct: 124 ARIYKTDRDKYNRISREWTQKYA 146


>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  201 bits (511), Expect = 4e-52
 Identities = 94/143 (65%), Positives = 114/143 (79%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           KRI KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A  Y T+R +++RI+R+WT++YA
Sbjct: 124 ARIYKTDRDKYNRISREWTQKYA 146


>gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  201 bits (511), Expect = 4e-52
 Identities = 94/143 (65%), Positives = 114/143 (79%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           KRI KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A  Y T+R +++RI+R+WT++YA
Sbjct: 124 ARIYKTDRDKYNRISREWTQKYA 146


>gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  201 bits (511), Expect = 4e-52
 Identities = 94/143 (65%), Positives = 114/143 (79%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           KRI KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A  Y T+R +++RI+R+WT++YA
Sbjct: 124 ARIYKTDRDKYNRISREWTQKYA 146


>gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  201 bits (511), Expect = 4e-52
 Identities = 94/143 (65%), Positives = 114/143 (79%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           KRI KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A  Y T+R +++RI+R+WT++YA
Sbjct: 124 ARIYKTDRDKYNRISREWTQKYA 146


>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
           sapiens]
          Length = 147

 Score =  200 bits (509), Expect = 6e-52
 Identities = 92/143 (64%), Positives = 113/143 (79%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           KRIQKEL ++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 4   KRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
           PPKV F T+IYH NINS G ICLDIL+  WSPALT+SKVLLSICSLL D NP DPLV  I
Sbjct: 64  PPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEI 123

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A  Y  +R +++R+AR+WT++YA
Sbjct: 124 AHTYKADREKYNRLAREWTQKYA 146


>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
           sapiens]
          Length = 149

 Score =  197 bits (502), Expect = 4e-51
 Identities = 92/146 (63%), Positives = 115/146 (78%)

Query: 61  TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDY 120
           ++ K + KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DY
Sbjct: 3   SNRKCLSKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 62

Query: 121 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180
           PFKPPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV
Sbjct: 63  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 122

Query: 181 GSIATQYLTNRAEHDRIARQWTKRYA 206
             IA  Y T+R +++RI+R+WT++YA
Sbjct: 123 PEIARIYKTDRDKYNRISREWTQKYA 148


>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
           sapiens]
          Length = 118

 Score =  167 bits (424), Expect = 4e-42
 Identities = 79/117 (67%), Positives = 94/117 (80%)

Query: 90  IYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDIL 149
           ++ W++TI+GP  S Y+GGVFFL I F +DYPFKPPKV F TRIYH NINS G ICLDIL
Sbjct: 1   MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL 60

Query: 150 KDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
           +  WSPALTISKVLLSICSLL D NP DPLV  IA  Y T+R +++RIAR+WT++YA
Sbjct: 61  RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 117


>gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]
          Length = 152

 Score =  130 bits (327), Expect = 8e-31
 Identities = 67/143 (46%), Positives = 84/143 (58%)

Query: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123
           +RI KE   +  +P P   A P   N   +   I GP  S +EGG F L++    +YP  
Sbjct: 6   RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMA 65

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
            PKV F T+IYH N++  G ICLDILKD WSPAL I  VLLSI +LL+  NP DPL   +
Sbjct: 66  APKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
           A Q+ TN A+    AR WT+ YA
Sbjct: 126 AEQWKTNEAQAIETARAWTRLYA 148


>gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]
          Length = 197

 Score =  118 bits (296), Expect = 3e-27
 Identities = 60/148 (40%), Positives = 92/148 (62%), Gaps = 4/148 (2%)

Query: 63  AKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPF 122
           A R+++EL  +  +PPP  +     D + + R+ ILG   + YE GVF L++     YPF
Sbjct: 4   ASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPF 63

Query: 123 KPPKVTFRTRIYHCNINSQGVICLDIL----KDNWSPALTISKVLLSICSLLTDCNPADP 178
           +PP++ F T IYH NI+S G ICLD+L    K  W P+L I+ VL SI  L+++ NP DP
Sbjct: 64  EPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDP 123

Query: 179 LVGSIATQYLTNRAEHDRIARQWTKRYA 206
           L+  I++++  N+    + ARQWT+++A
Sbjct: 124 LMADISSEFKYNKPAFLKNARQWTEKHA 151


>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
          Length = 152

 Score =  117 bits (292), Expect = 9e-27
 Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 1/139 (0%)

Query: 59  LSTSAKR-IQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFS 117
           +ST A+R + ++   +  DPP   S  P  +NI +W + I GP G+ +E G F L I FS
Sbjct: 1   MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60

Query: 118 SDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPAD 177
            +YP KPP V F ++++H N+ + G ICLDIL++ WSP   +S +L SI SLL + NP  
Sbjct: 61  EEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120

Query: 178 PLVGSIATQYLTNRAEHDR 196
           P     A  Y  N+ E+++
Sbjct: 121 PANSQAAQLYQENKREYEK 139


>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
           sapiens]
          Length = 152

 Score =  115 bits (287), Expect = 3e-26
 Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 1/139 (0%)

Query: 59  LSTSAKR-IQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFS 117
           +ST A+R + ++   +  DPP   S  P  +NI  W + I GP G+ +E G F L I F+
Sbjct: 1   MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60

Query: 118 SDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPAD 177
            +YP KPP V F ++++H N+ + G ICLDIL++ WSP   +S +L SI SLL + NP  
Sbjct: 61  EEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 120

Query: 178 PLVGSIATQYLTNRAEHDR 196
           P     A  Y  N+ E+++
Sbjct: 121 PANSQAAQLYQENKREYEK 139


>gi|61175265 ubiquitin-conjugating enzyme E2N-like [Homo sapiens]
          Length = 153

 Score =  112 bits (279), Expect = 3e-25
 Identities = 62/143 (43%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 65  RIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPP-GSVYEGGVFFLDITFSSDYPFK 123
           RI KE   +  +P P   A P   N   +   I G    S +EGG F  ++  + +YP  
Sbjct: 7   RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMA 66

Query: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183
            PKV F T+IYH N++    I LDILKD WSPAL I  VLLSI +LL   NP DPL   +
Sbjct: 67  APKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDV 126

Query: 184 ATQYLTNRAEHDRIARQWTKRYA 206
             Q+ TN A+    AR WT+ YA
Sbjct: 127 VEQWKTNEAQAIETARAWTRLYA 149


>gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo
           sapiens]
          Length = 200

 Score =  108 bits (270), Expect = 3e-24
 Identities = 57/120 (47%), Positives = 71/120 (59%), Gaps = 1/120 (0%)

Query: 88  DNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINS-QGVICL 146
           +N  E R  I GPP + YEGG + L+I     YPF PPKV F T+I+H NI+S  G ICL
Sbjct: 34  ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICL 93

Query: 147 DILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
           DILKD W+ A+T+  VLLS+ +LL    P DP    +A QY  N     + AR W   YA
Sbjct: 94  DILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153


>gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo
           sapiens]
          Length = 154

 Score =  102 bits (254), Expect = 2e-22
 Identities = 52/146 (35%), Positives = 87/146 (59%), Gaps = 3/146 (2%)

Query: 62  SAKRIQKELAEITLDPPPNCSAGPKGD-NIYEWRSTILGPPGSVYEGGVFFLDITFSSDY 120
           +++R+ KEL EI      N       + N+  W+  I+ P    Y+ G F ++I F ++Y
Sbjct: 3   ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEY 61

Query: 121 PFKPPKVTFRTRIYHCNINSQGVICLDILK-DNWSPALTISKVLLSICSLLTDCNPADPL 179
           PFKPPK+TF+T+IYH NI+ +G +CL ++  +NW PA    +V+ S+ +L+ D  P  PL
Sbjct: 62  PFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPL 121

Query: 180 VGSIATQYLTNRAEHDRIARQWTKRY 205
              +A +Y  +R +  + A ++TK+Y
Sbjct: 122 RADLAEEYSKDRKKFCKNAEEFTKKY 147


>gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo
           sapiens]
          Length = 179

 Score =  101 bits (251), Expect = 5e-22
 Identities = 57/145 (39%), Positives = 80/145 (55%), Gaps = 1/145 (0%)

Query: 36  EERKPSATQQKKNTKLSSKTT-AKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWR 94
           + R P+AT      K +  +  A      KR+Q+EL  + +      SA P+ DN+++W 
Sbjct: 4   QNRDPAATSVAAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWV 63

Query: 95  STILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWS 154
            TI G  G+VYE   + L + F S YP+  P V F T  YH N+++QG ICLDILK+ WS
Sbjct: 64  GTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWS 123

Query: 155 PALTISKVLLSICSLLTDCNPADPL 179
               +  +LLSI SLL + N   PL
Sbjct: 124 ALYDVRTILLSIQSLLGEPNIDSPL 148


>gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens]
          Length = 170

 Score =  100 bits (249), Expect = 9e-22
 Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 14/144 (9%)

Query: 62  SAKRIQKELAEITLDPPPNCSAGPKGDN-IYEWRSTILGPPGSVYEGGVFFLDITFSSDY 120
           SA  ++++LAE+  +P    SAG   DN +Y W   I+GPP ++YEGGVF   +TF  DY
Sbjct: 6   SALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDY 65

Query: 121 PFKPPKVTFRTRIYHCNINSQGVICLDIL-------------KDNWSPALTISKVLLSIC 167
           P +PPK+ F T I+H N++  G +C+ IL             ++ W P  T+  +++S+ 
Sbjct: 66  PLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVI 125

Query: 168 SLLTDCNPADPLVGSIATQYLTNR 191
           S+L D N   P     A ++  +R
Sbjct: 126 SMLADPNGDSPANVDAAKEWREDR 149


>gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo
           sapiens]
          Length = 157

 Score = 97.8 bits (242), Expect = 6e-21
 Identities = 50/100 (50%), Positives = 63/100 (63%), Gaps = 1/100 (1%)

Query: 88  DNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINS-QGVICL 146
           +N  E R  I GPP + YEGG + L+I     YPF PPKV F T+I+H NI+S  G ICL
Sbjct: 34  ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICL 93

Query: 147 DILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ 186
           DILKD W+ A+T+  VLLS+ +LL    P DP    +A Q
Sbjct: 94  DILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQ 133


>gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo
           sapiens]
          Length = 165

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 14/154 (9%)

Query: 61  TSAKRIQKELAEITLDPPPNCSAGPKGD-NIYEWRSTILGPPGSVYEGGVFFLDITFSSD 119
           T+ KR+  E  ++TL+PP    AGP  + N +EW + I+GP  + +E GVF   ++F  D
Sbjct: 4   TALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLD 63

Query: 120 YPFKPPKVTFRTRIYHCNINSQGVICLDIL-------------KDNWSPALTISKVLLSI 166
           YP  PPK+ F   ++H NI   G +C+ IL              + WSP  ++ K+LLS+
Sbjct: 64  YPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSV 123

Query: 167 CSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQ 200
            S+L + N         +  +  +R +  +IA+Q
Sbjct: 124 VSMLAEPNDESGANVDASKMWRDDREQFYKIAKQ 157


>gi|35494003 ubiquitin-conjugating enzyme E2I [Homo sapiens]
          Length = 158

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 89  NIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDI 148
           N+  W   I G  G+ +EGG+F L + F  DYP  PPK  F   ++H N+   G +CL I
Sbjct: 37  NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSI 96

Query: 149 LKD--NWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
           L++  +W PA+TI ++LL I  LL + N  DP      T Y  NR E+++  R   K++A
Sbjct: 97  LEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.128    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,517,194
Number of Sequences: 37866
Number of extensions: 455161
Number of successful extensions: 3509
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 126
Number of HSP's that attempted gapping in prelim test: 3041
Number of HSP's gapped (non-prelim): 554
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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