RORA 29336

Name: RORA	Sequence: fasta or formatted (548aa)		NCBI GI: 4506577
Description: RAR-related orphan receptor A isoform c		Referenced in: Circadian Rhythms Nuclear Receptors
Other entries for this name: alt prot [556aa] RAR-related orphan receptor A isoform b alt prot [523aa] RAR-related orphan receptor A isoform a alt prot [468aa] RAR-related orphan receptor A isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 35 1 C cysteine 3.8 21 1 D aspartate 4.9 27 2 E glutamate 7.1 39 2 F phenylalanine 5.3 29 2 G glycine 5.5 30 1 H histidine 2.7 15 1 I isoleucine 6.2 34 2 K lysine 5.7 31 2 L leucine 8.8 48 2 M methionine 2.6 14 1 N asparagine 3.5 19 2 P proline 4.2 23 2 Q glutamine 7.1 39 4 R arginine 5.3 29 2 S serine 8.4 46 3 T threonine 4.9 27 1 V valine 3.8 21 2 W tryptophan 1.1 6 1 Y tyrosine 2.7 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RAR-related orphan receptor A isoform c RORA 0.902 RAR-related orphan receptor A isoform b RORA 0.835 RAR-related orphan receptor A isoform d RORA 0.831 RAR-related orphan receptor A isoform a RORB 0.509 RAR-related orphan receptor B RORC 0.393 RAR-related orphan receptor C isoform b RORC 0.393 RAR-related orphan receptor C isoform a NR1D2 0.108 nuclear receptor subfamily 1, group D, member 2 iso... NR1D2 0.108 nuclear receptor subfamily 1, group D, member 2 iso... NR2C1 0.098 nuclear receptor subfamily 2, group C, member 1 iso... NR1D1 0.095 nuclear receptor subfamily 1, group D, member 1 [Hom... NR5A2 0.090 nuclear receptor subfamily 5, group A, member 2 isof... NR5A2 0.090 nuclear receptor subfamily 5, group A, member 2 isofo... RARG 0.088 retinoic acid receptor, gamma isoform 2 RARG 0.088 retinoic acid receptor, gamma isoform 1 RARB 0.088 retinoic acid receptor, beta isoform 1 RARA 0.087 retinoic acid receptor, alpha isoform 1 RARA 0.087 retinoic acid receptor, alpha isoform 2 RARA 0.087 retinoic acid receptor, alpha isoform 1 RXRA 0.082 retinoid X receptor, alpha NR2C1 0.081 nuclear receptor subfamily 2, group C, member 1 iso... NR2C1 0.081 nuclear receptor subfamily 2, group C, member 1 isof... PPARG 0.081 peroxisome proliferative activated receptor gamma i... PPARG 0.081 peroxisome proliferative activated receptor gamma is... PPARG 0.081 peroxisome proliferative activated receptor gamma i... PPARG 0.081 peroxisome proliferative activated receptor gamma i... NR2F1 0.081 nuclear receptor subfamily 2, group F, member 1 [Homo... NR2F2 0.080 nuclear receptor subfamily 2, group F, member 2 isof... RXRB 0.080 retinoid X receptor, beta RXRG 0.078 retinoid X receptor, gamma isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.