MSLN 32462

Name: MSLN	Sequence: fasta or formatted (622aa)		NCBI GI: 53988378
Description: mesothelin isoform 1 preproprotein		Not currently referenced in the text
Other entries for this name: alt prot {630aa} mesothelin isoform 2 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 55 2 C cysteine 1.9 12 1 D aspartate 5.5 34 2 E glutamate 5.8 36 2 F phenylalanine 2.9 18 2 G glycine 7.1 44 3 H histidine 1.0 6 1 I isoleucine 2.7 17 2 K lysine 3.5 22 2 L leucine 16.4 102 3 M methionine 1.4 9 1 N asparagine 1.9 12 1 P proline 8.4 52 2 Q glutamine 5.1 32 2 R arginine 6.8 42 2 S serine 6.9 43 2 T threonine 4.7 29 1 V valine 5.9 37 1 W tryptophan 1.4 9 1 Y tyrosine 1.8 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mesothelin isoform 1 preproprotein MSLN 0.993 mesothelin isoform 2 preproprotein MSLNL 0.112 mesothelin-like CHADL 0.014 chondroadherin-like EDEM2 0.006 ER degradation enhancer, mannosidase alpha-like 2 i... EDEM2 0.006 ER degradation enhancer, mannosidase alpha-like 2 i... ABCA13 0.005 ATP binding cassette, sub-family A (ABC1), member 13... KDM5C 0.005 jumonji, AT rich interactive domain 1C isoform 1 [H... LOC100293168 0.005 PREDICTED: hypothetical protein LOC100287177 0.005 PREDICTED: hypothetical protein LOC100287177 0.005 PREDICTED: hypothetical protein XP_002343692 EPN1 0.004 epsin 1 isoform c EPN1 0.004 epsin 1 isoform b EPN1 0.004 epsin 1 isoform a RGS20 0.004 regulator of G-protein signaling 20 isoform a NAT14 0.004 N-acetyltransferase 14 RSC1A1 0.004 regulatory solute carrier protein, family 1, member 1... PUM1 0.004 pumilio 1 isoform 2 PUM1 0.004 pumilio 1 isoform 1 LOC400558 0.004 PREDICTED: hypothetical protein LOC400558 LOC400558 0.004 PREDICTED: hypothetical protein LOC400558 LOC400558 0.004 PREDICTED: hypothetical protein LOC400558 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.