Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 52138513
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|52138513 SIN3 homolog B, transcription regulator [Homo
sapiens]
(1162 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|52138513 SIN3 homolog B, transcription regulator [Homo sapiens] 2359 0.0
gi|23397666 transcriptional co-repressor Sin3A [Homo sapiens] 1148 0.0
gi|223941785 transcriptional co-repressor Sin3A [Homo sapiens] 1148 0.0
gi|223941782 transcriptional co-repressor Sin3A [Homo sapiens] 1148 0.0
gi|18426913 drebrin 1 isoform b [Homo sapiens] 43 0.002
gi|18426915 drebrin 1 isoform a [Homo sapiens] 43 0.002
gi|18079216 CASK interacting protein 1 [Homo sapiens] 40 0.010
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 39 0.029
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 39 0.038
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 39 0.038
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 38 0.064
gi|222537714 taxilin beta [Homo sapiens] 37 0.11
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 37 0.11
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 37 0.11
gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens] 37 0.14
gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens] 37 0.14
gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens] 37 0.14
gi|62422577 neurobeachin [Homo sapiens] 37 0.14
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 37 0.14
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 36 0.19
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 36 0.19
gi|33286446 opioid growth factor receptor [Homo sapiens] 36 0.24
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 36 0.24
gi|239753043 PREDICTED: hypothetical protein [Homo sapiens] 35 0.32
gi|21070967 neurexin 1 isoform beta precursor [Homo sapiens] 35 0.32
gi|225637562 NIMA-related kinase 11 isoform 3 [Homo sapiens] 35 0.32
gi|225637560 NIMA-related kinase 11 isoform 1 [Homo sapiens] 35 0.32
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 35 0.32
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 35 0.32
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 35 0.32
>gi|52138513 SIN3 homolog B, transcription regulator [Homo sapiens]
Length = 1162
Score = 2359 bits (6114), Expect = 0.0
Identities = 1162/1162 (100%), Positives = 1162/1162 (100%)
Query: 1 MAHAGGGSGGSGAGGPAGRGLSGARWGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPA 60
MAHAGGGSGGSGAGGPAGRGLSGARWGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPA
Sbjct: 1 MAHAGGGSGGSGAGGPAGRGLSGARWGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPA 60
Query: 61 TYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNI 120
TYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNI
Sbjct: 61 TYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNI 120
Query: 121 QSPLTSQENSHNHGDGAEDFKQQVPYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHP 180
QSPLTSQENSHNHGDGAEDFKQQVPYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHP
Sbjct: 121 QSPLTSQENSHNHGDGAEDFKQQVPYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHP 180
Query: 181 EIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKR 240
EIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKR
Sbjct: 181 EIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKR 240
Query: 241 SLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSAPAKKKMKLRGTKDLSIAAVG 300
SLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSAPAKKKMKLRGTKDLSIAAVG
Sbjct: 241 SLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSAPAKKKMKLRGTKDLSIAAVG 300
Query: 301 KYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFA 360
KYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFA
Sbjct: 301 KYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFA 360
Query: 361 QFKSFLGVKELSFAPPMSDRSGDGISREIDYASCKRIGSSYRALPKTYQQPKCSGRTAIC 420
QFKSFLGVKELSFAPPMSDRSGDGISREIDYASCKRIGSSYRALPKTYQQPKCSGRTAIC
Sbjct: 361 QFKSFLGVKELSFAPPMSDRSGDGISREIDYASCKRIGSSYRALPKTYQQPKCSGRTAIC 420
Query: 421 KELDHWTLLQGSWTDDYCMSKFKNTCWIPGYSAGVLNDTWVSFPSWSEDSTFVSSKKTPY 480
KELDHWTLLQGSWTDDYCMSKFKNTCWIPGYSAGVLNDTWVSFPSWSEDSTFVSSKKTPY
Sbjct: 421 KELDHWTLLQGSWTDDYCMSKFKNTCWIPGYSAGVLNDTWVSFPSWSEDSTFVSSKKTPY 480
Query: 481 EEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQ 540
EEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQ
Sbjct: 481 EEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQ 540
Query: 541 RRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAY 600
RRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAY
Sbjct: 541 RRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAY 600
Query: 601 LKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQ 660
LKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQ
Sbjct: 601 LKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQ 660
Query: 661 ILEDAAALISYYVKRQPAIQKEDQGTIHQLLHQFVPSLFFSQQLDLGASEESADEDRDSP 720
ILEDAAALISYYVKRQPAIQKEDQGTIHQLLHQFVPSLFFSQQLDLGASEESADEDRDSP
Sbjct: 661 ILEDAAALISYYVKRQPAIQKEDQGTIHQLLHQFVPSLFFSQQLDLGASEESADEDRDSP 720
Query: 721 QGQTTDPSERKKPAPGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKPLDDVYSLFFANNN 780
QGQTTDPSERKKPAPGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKPLDDVYSLFFANNN
Sbjct: 721 QGQTTDPSERKKPAPGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKPLDDVYSLFFANNN 780
Query: 781 WYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKEREKLLCEGRREKGSDPAMELRLKQPS 840
WYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKEREKLLCEGRREKGSDPAMELRLKQPS
Sbjct: 781 WYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKEREKLLCEGRREKGSDPAMELRLKQPS 840
Query: 841 EVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQNIARQLHHL 900
EVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQNIARQLHHL
Sbjct: 841 EVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQNIARQLHHL 900
Query: 901 VSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSYQWKAERCMADENCFKVMFLQR 960
VSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSYQWKAERCMADENCFKVMFLQR
Sbjct: 901 VSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSYQWKAERCMADENCFKVMFLQR 960
Query: 961 KGQVIMTIELLDTEEAQTEDPVEVQHLARYVEQYVGTEGASSSPTEGFLLKPVFLQRNLK 1020
KGQVIMTIELLDTEEAQTEDPVEVQHLARYVEQYVGTEGASSSPTEGFLLKPVFLQRNLK
Sbjct: 961 KGQVIMTIELLDTEEAQTEDPVEVQHLARYVEQYVGTEGASSSPTEGFLLKPVFLQRNLK 1020
Query: 1021 KFRRRWQSEQARALRGEARSSWKRLVGVESACDVDCRFKLSTHKMVFIVNSEDYMYRRGT 1080
KFRRRWQSEQARALRGEARSSWKRLVGVESACDVDCRFKLSTHKMVFIVNSEDYMYRRGT
Sbjct: 1021 KFRRRWQSEQARALRGEARSSWKRLVGVESACDVDCRFKLSTHKMVFIVNSEDYMYRRGT 1080
Query: 1081 LCRAKQVQPLVLLRHHQHFEEWHSRWLEDNVTVEAASLVQDWLMGEEDEDMVPCKTLCET 1140
LCRAKQVQPLVLLRHHQHFEEWHSRWLEDNVTVEAASLVQDWLMGEEDEDMVPCKTLCET
Sbjct: 1081 LCRAKQVQPLVLLRHHQHFEEWHSRWLEDNVTVEAASLVQDWLMGEEDEDMVPCKTLCET 1140
Query: 1141 VHVHGLPVTRYRVQYSRRPASP 1162
VHVHGLPVTRYRVQYSRRPASP
Sbjct: 1141 VHVHGLPVTRYRVQYSRRPASP 1162
>gi|23397666 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 1148 bits (2969), Expect = 0.0
Identities = 611/1190 (51%), Positives = 789/1190 (66%), Gaps = 121/1190 (10%)
Query: 41 VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 100
VEDAL+YLDQVK++FGS P YN FL+IMKEFKSQSIDTPGVI RVSQLF HPDLI+GF
Sbjct: 123 VEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGF 182
Query: 101 NAFLPLGYRIDIPKNGKLNIQSP--------------------LTSQENSHNHGDGAEDF 140
N FLP GY+I++ N +N+ +P SQ ++ + A+
Sbjct: 183 NTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQPA 242
Query: 141 KQQVPYKEDKP-----------QVP-----------------------------LESDSV 160
Q P K KP Q P + V
Sbjct: 243 PQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQPV 302
Query: 161 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTR---GRPFRGMSEEEVFTEV 217
EFN+AI+YVNKIK RF P+IY++FLEILHTYQKEQ N + G ++E+EV+ +V
Sbjct: 303 EFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQV 362
Query: 218 ANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHD---KTPEHSRKRSRPSL 274
A LF+ QEDLLSEFGQFLP+A S+ E +N+H K P+ + K RPS
Sbjct: 363 ARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRPSQ 422
Query: 275 L--------RPVSAPAKKKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYEN 326
+ P KKK KL KD S+A K+G E FFDKVR+ L+S E YEN
Sbjct: 423 NGCQIRRHPTGTTPPVKKKPKLLNLKDSSMADASKHGGGTESLFFDKVRKALRSAEAYEN 482
Query: 327 FLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSFLGVKE-LSFAPPMSDRSGDGI 385
FLRC+ +FNQE++S +EL+QLVSPFLGKFPELF FK+FLG KE + +R+ +GI
Sbjct: 483 FLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETYPKERATEGI 542
Query: 386 SREIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFKNT 445
+ EIDYASCKR+GSSYRALPK+YQQPKC+GRT +CKE
Sbjct: 543 AMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKE----------------------- 579
Query: 446 CWIPGYSAGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATI 505
VLNDTWVSFPSWSEDSTFVSSKKT YEE ++RCEDERFELDVVLETNLATI
Sbjct: 580 ---------VLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATI 630
Query: 506 RVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVT 565
RVLE++QKKLSR++ E+Q KFRLD++LGGTSEVI R+A+ RIY DKA +II+ L+KNP
Sbjct: 631 RVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSI 690
Query: 566 AVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLL 625
AVP+VLKRLK KEEEWREAQ+GFNK+WREQ EK YLKSLDHQ +NFKQNDTK LRSKSLL
Sbjct: 691 AVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLL 750
Query: 626 NEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISYYVKRQPAIQKEDQG 685
NEIES+YDE QEQ +E + PHL YED+QILEDAAALI ++VKRQ IQKED+
Sbjct: 751 NEIESIYDERQEQATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKY 810
Query: 686 TIHQLLHQFVPSLFFSQQLDLGASEESADEDRDSPQGQTTDPSERKKPAPGPHSSPPEEK 745
I Q++H F+P L F+Q+ DL EE +E+ D + + K G SPP+ K
Sbjct: 811 KIKQIMHHFIPDLLFAQRGDLSDVEEEEEEEMD-----VDEATGAVKKHNGVGGSPPKSK 865
Query: 746 GAFGDAPATEQPPLPPPAPHKPLDDVYSLFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQ 805
F + A + + +D+VY+LF+ NNNWY F+RLHQ LC RLL+I QA++Q
Sbjct: 866 LLFSNTAAQKL---------RGMDEVYNLFYVNNNWYIFMRLHQILCLRLLRICSQAERQ 916
Query: 806 LLEYRTEKEREKLLCEGRREKGSDPAMELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDP 865
+ E E+E E+ + +R+K PA++LRLK+P +V++E+YYPAFLDMVRSLL+G+ID
Sbjct: 917 IEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDS 976
Query: 866 TQYEDTLREMFTIHAYVGFTMDKLVQNIARQLHHLVSDDVCLKVVELYLNEKKRGAAGGN 925
+QYED+LREMFTIHAY+ FTMDKL+Q+I RQL H+VSD++C++V +LYL E GA GG
Sbjct: 977 SQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLYLAENNNGATGGQ 1036
Query: 926 LSSRCVRAARETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELLDTEEAQTEDPVEVQ 985
L+++ R+ E++YQ KAE+ M+DENCFK+MF+Q +GQV +TIELLDTEE ++DPVE +
Sbjct: 1037 LNTQNSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELLDTEEENSDDPVEAE 1096
Query: 986 HLARYVEQYVGTEGASSSPTEGFLLKPVFLQRNLKKFRRRWQSEQARALRGEARSSWKRL 1045
+ YVE+Y+ ++ S E KPVFL RNL++ R+ + + + G+ +S K +
Sbjct: 1097 RWSDYVERYMNSDTTSPELREHLAQKPVFLPRNLRRIRKCQRGREQQEKEGKEGNSKKTM 1156
Query: 1046 VGVESACDVDCRFKLSTHKMVFIVNSEDYMYRRGTLCRAKQVQPLVLLRHHQHFEEWHSR 1105
V+S ++CRFKL+++KMV+++ SEDYMYRR L RA Q V R HQ F+ W +
Sbjct: 1157 ENVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSHERVSKRLHQRFQAWVDK 1216
Query: 1106 WLEDNVTVEAASLVQDWLMGEEDEDMVPCKTLCETVHVHGLPVTRYRVQY 1155
W +++V E A+ WLMGE E +VPC T C+T +H + + +YRV+Y
Sbjct: 1217 WTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSINKYRVKY 1266
Score = 58.9 bits (141), Expect = 3e-08
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 124 LTSQENSHNHGDGAEDFKQQVPYKEDKPQVPL-------ESDSVEFNNAISYVNKIKTRF 176
+ + +SH+H + QV P P+ + ++ +A+SY++++K +F
Sbjct: 78 IAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQRLKVEDALSYLDQVKLQF 137
Query: 177 LDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLP 236
P++Y FL+I+ ++ + ++T G V + V+ LF+G DL+ F FLP
Sbjct: 138 GSQPQVYNDFLDIMKEFKSQSIDTPG----------VISRVSQLFKGHPDLIMGFNTFLP 187
Query: 237 EAKR------SLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSAPA 282
+ + P ++H + H P+ PS SAPA
Sbjct: 188 PGYKIEVQTNDMVNVTTPGQVHQIP--THGIQPQPQPPPQHPSQPSAQSAPA 237
Score = 42.7 bits (99), Expect = 0.002
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 20/127 (15%)
Query: 38 PVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSID--------TPG-----VIR 84
PV A+ Y++++K RF P Y FLEI+ ++ + + TP V
Sbjct: 301 PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA 360
Query: 85 RVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQV 144
+V++LF DL+ F FLP N + + + +S + G K Q+
Sbjct: 361 QVARLFKNQEDLLSEFGQFLP-------DANSSVLLSKTTAEKVDSVRNDHGGTVKKPQL 413
Query: 145 PYKEDKP 151
K +P
Sbjct: 414 NNKPQRP 420
>gi|223941785 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 1148 bits (2969), Expect = 0.0
Identities = 611/1190 (51%), Positives = 789/1190 (66%), Gaps = 121/1190 (10%)
Query: 41 VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 100
VEDAL+YLDQVK++FGS P YN FL+IMKEFKSQSIDTPGVI RVSQLF HPDLI+GF
Sbjct: 123 VEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGF 182
Query: 101 NAFLPLGYRIDIPKNGKLNIQSP--------------------LTSQENSHNHGDGAEDF 140
N FLP GY+I++ N +N+ +P SQ ++ + A+
Sbjct: 183 NTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQPA 242
Query: 141 KQQVPYKEDKP-----------QVP-----------------------------LESDSV 160
Q P K KP Q P + V
Sbjct: 243 PQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQPV 302
Query: 161 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTR---GRPFRGMSEEEVFTEV 217
EFN+AI+YVNKIK RF P+IY++FLEILHTYQKEQ N + G ++E+EV+ +V
Sbjct: 303 EFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQV 362
Query: 218 ANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHD---KTPEHSRKRSRPSL 274
A LF+ QEDLLSEFGQFLP+A S+ E +N+H K P+ + K RPS
Sbjct: 363 ARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRPSQ 422
Query: 275 L--------RPVSAPAKKKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYEN 326
+ P KKK KL KD S+A K+G E FFDKVR+ L+S E YEN
Sbjct: 423 NGCQIRRHPTGTTPPVKKKPKLLNLKDSSMADASKHGGGTESLFFDKVRKALRSAEAYEN 482
Query: 327 FLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSFLGVKE-LSFAPPMSDRSGDGI 385
FLRC+ +FNQE++S +EL+QLVSPFLGKFPELF FK+FLG KE + +R+ +GI
Sbjct: 483 FLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETYPKERATEGI 542
Query: 386 SREIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFKNT 445
+ EIDYASCKR+GSSYRALPK+YQQPKC+GRT +CKE
Sbjct: 543 AMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKE----------------------- 579
Query: 446 CWIPGYSAGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATI 505
VLNDTWVSFPSWSEDSTFVSSKKT YEE ++RCEDERFELDVVLETNLATI
Sbjct: 580 ---------VLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATI 630
Query: 506 RVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVT 565
RVLE++QKKLSR++ E+Q KFRLD++LGGTSEVI R+A+ RIY DKA +II+ L+KNP
Sbjct: 631 RVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSI 690
Query: 566 AVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLL 625
AVP+VLKRLK KEEEWREAQ+GFNK+WREQ EK YLKSLDHQ +NFKQNDTK LRSKSLL
Sbjct: 691 AVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLL 750
Query: 626 NEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISYYVKRQPAIQKEDQG 685
NEIES+YDE QEQ +E + PHL YED+QILEDAAALI ++VKRQ IQKED+
Sbjct: 751 NEIESIYDERQEQATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKY 810
Query: 686 TIHQLLHQFVPSLFFSQQLDLGASEESADEDRDSPQGQTTDPSERKKPAPGPHSSPPEEK 745
I Q++H F+P L F+Q+ DL EE +E+ D + + K G SPP+ K
Sbjct: 811 KIKQIMHHFIPDLLFAQRGDLSDVEEEEEEEMD-----VDEATGAVKKHNGVGGSPPKSK 865
Query: 746 GAFGDAPATEQPPLPPPAPHKPLDDVYSLFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQ 805
F + A + + +D+VY+LF+ NNNWY F+RLHQ LC RLL+I QA++Q
Sbjct: 866 LLFSNTAAQKL---------RGMDEVYNLFYVNNNWYIFMRLHQILCLRLLRICSQAERQ 916
Query: 806 LLEYRTEKEREKLLCEGRREKGSDPAMELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDP 865
+ E E+E E+ + +R+K PA++LRLK+P +V++E+YYPAFLDMVRSLL+G+ID
Sbjct: 917 IEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDS 976
Query: 866 TQYEDTLREMFTIHAYVGFTMDKLVQNIARQLHHLVSDDVCLKVVELYLNEKKRGAAGGN 925
+QYED+LREMFTIHAY+ FTMDKL+Q+I RQL H+VSD++C++V +LYL E GA GG
Sbjct: 977 SQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLYLAENNNGATGGQ 1036
Query: 926 LSSRCVRAARETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELLDTEEAQTEDPVEVQ 985
L+++ R+ E++YQ KAE+ M+DENCFK+MF+Q +GQV +TIELLDTEE ++DPVE +
Sbjct: 1037 LNTQNSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELLDTEEENSDDPVEAE 1096
Query: 986 HLARYVEQYVGTEGASSSPTEGFLLKPVFLQRNLKKFRRRWQSEQARALRGEARSSWKRL 1045
+ YVE+Y+ ++ S E KPVFL RNL++ R+ + + + G+ +S K +
Sbjct: 1097 RWSDYVERYMNSDTTSPELREHLAQKPVFLPRNLRRIRKCQRGREQQEKEGKEGNSKKTM 1156
Query: 1046 VGVESACDVDCRFKLSTHKMVFIVNSEDYMYRRGTLCRAKQVQPLVLLRHHQHFEEWHSR 1105
V+S ++CRFKL+++KMV+++ SEDYMYRR L RA Q V R HQ F+ W +
Sbjct: 1157 ENVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSHERVSKRLHQRFQAWVDK 1216
Query: 1106 WLEDNVTVEAASLVQDWLMGEEDEDMVPCKTLCETVHVHGLPVTRYRVQY 1155
W +++V E A+ WLMGE E +VPC T C+T +H + + +YRV+Y
Sbjct: 1217 WTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSINKYRVKY 1266
Score = 58.9 bits (141), Expect = 3e-08
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 124 LTSQENSHNHGDGAEDFKQQVPYKEDKPQVPL-------ESDSVEFNNAISYVNKIKTRF 176
+ + +SH+H + QV P P+ + ++ +A+SY++++K +F
Sbjct: 78 IAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQRLKVEDALSYLDQVKLQF 137
Query: 177 LDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLP 236
P++Y FL+I+ ++ + ++T G V + V+ LF+G DL+ F FLP
Sbjct: 138 GSQPQVYNDFLDIMKEFKSQSIDTPG----------VISRVSQLFKGHPDLIMGFNTFLP 187
Query: 237 EAKR------SLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSAPA 282
+ + P ++H + H P+ PS SAPA
Sbjct: 188 PGYKIEVQTNDMVNVTTPGQVHQIP--THGIQPQPQPPPQHPSQPSAQSAPA 237
Score = 42.7 bits (99), Expect = 0.002
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 20/127 (15%)
Query: 38 PVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSID--------TPG-----VIR 84
PV A+ Y++++K RF P Y FLEI+ ++ + + TP V
Sbjct: 301 PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA 360
Query: 85 RVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQV 144
+V++LF DL+ F FLP N + + + +S + G K Q+
Sbjct: 361 QVARLFKNQEDLLSEFGQFLP-------DANSSVLLSKTTAEKVDSVRNDHGGTVKKPQL 413
Query: 145 PYKEDKP 151
K +P
Sbjct: 414 NNKPQRP 420
>gi|223941782 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 1148 bits (2969), Expect = 0.0
Identities = 611/1190 (51%), Positives = 789/1190 (66%), Gaps = 121/1190 (10%)
Query: 41 VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 100
VEDAL+YLDQVK++FGS P YN FL+IMKEFKSQSIDTPGVI RVSQLF HPDLI+GF
Sbjct: 123 VEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGF 182
Query: 101 NAFLPLGYRIDIPKNGKLNIQSP--------------------LTSQENSHNHGDGAEDF 140
N FLP GY+I++ N +N+ +P SQ ++ + A+
Sbjct: 183 NTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQPA 242
Query: 141 KQQVPYKEDKP-----------QVP-----------------------------LESDSV 160
Q P K KP Q P + V
Sbjct: 243 PQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQPV 302
Query: 161 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTR---GRPFRGMSEEEVFTEV 217
EFN+AI+YVNKIK RF P+IY++FLEILHTYQKEQ N + G ++E+EV+ +V
Sbjct: 303 EFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQV 362
Query: 218 ANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHD---KTPEHSRKRSRPSL 274
A LF+ QEDLLSEFGQFLP+A S+ E +N+H K P+ + K RPS
Sbjct: 363 ARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRPSQ 422
Query: 275 L--------RPVSAPAKKKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYEN 326
+ P KKK KL KD S+A K+G E FFDKVR+ L+S E YEN
Sbjct: 423 NGCQIRRHPTGTTPPVKKKPKLLNLKDSSMADASKHGGGTESLFFDKVRKALRSAEAYEN 482
Query: 327 FLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSFLGVKE-LSFAPPMSDRSGDGI 385
FLRC+ +FNQE++S +EL+QLVSPFLGKFPELF FK+FLG KE + +R+ +GI
Sbjct: 483 FLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETYPKERATEGI 542
Query: 386 SREIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFKNT 445
+ EIDYASCKR+GSSYRALPK+YQQPKC+GRT +CKE
Sbjct: 543 AMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKE----------------------- 579
Query: 446 CWIPGYSAGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATI 505
VLNDTWVSFPSWSEDSTFVSSKKT YEE ++RCEDERFELDVVLETNLATI
Sbjct: 580 ---------VLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATI 630
Query: 506 RVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVT 565
RVLE++QKKLSR++ E+Q KFRLD++LGGTSEVI R+A+ RIY DKA +II+ L+KNP
Sbjct: 631 RVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSI 690
Query: 566 AVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLL 625
AVP+VLKRLK KEEEWREAQ+GFNK+WREQ EK YLKSLDHQ +NFKQNDTK LRSKSLL
Sbjct: 691 AVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLL 750
Query: 626 NEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISYYVKRQPAIQKEDQG 685
NEIES+YDE QEQ +E + PHL YED+QILEDAAALI ++VKRQ IQKED+
Sbjct: 751 NEIESIYDERQEQATEENAGVPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKY 810
Query: 686 TIHQLLHQFVPSLFFSQQLDLGASEESADEDRDSPQGQTTDPSERKKPAPGPHSSPPEEK 745
I Q++H F+P L F+Q+ DL EE +E+ D + + K G SPP+ K
Sbjct: 811 KIKQIMHHFIPDLLFAQRGDLSDVEEEEEEEMD-----VDEATGAVKKHNGVGGSPPKSK 865
Query: 746 GAFGDAPATEQPPLPPPAPHKPLDDVYSLFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQ 805
F + A + + +D+VY+LF+ NNNWY F+RLHQ LC RLL+I QA++Q
Sbjct: 866 LLFSNTAAQKL---------RGMDEVYNLFYVNNNWYIFMRLHQILCLRLLRICSQAERQ 916
Query: 806 LLEYRTEKEREKLLCEGRREKGSDPAMELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDP 865
+ E E+E E+ + +R+K PA++LRLK+P +V++E+YYPAFLDMVRSLL+G+ID
Sbjct: 917 IEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDS 976
Query: 866 TQYEDTLREMFTIHAYVGFTMDKLVQNIARQLHHLVSDDVCLKVVELYLNEKKRGAAGGN 925
+QYED+LREMFTIHAY+ FTMDKL+Q+I RQL H+VSD++C++V +LYL E GA GG
Sbjct: 977 SQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLYLAENNNGATGGQ 1036
Query: 926 LSSRCVRAARETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELLDTEEAQTEDPVEVQ 985
L+++ R+ E++YQ KAE+ M+DENCFK+MF+Q +GQV +TIELLDTEE ++DPVE +
Sbjct: 1037 LNTQNSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELLDTEEENSDDPVEAE 1096
Query: 986 HLARYVEQYVGTEGASSSPTEGFLLKPVFLQRNLKKFRRRWQSEQARALRGEARSSWKRL 1045
+ YVE+Y+ ++ S E KPVFL RNL++ R+ + + + G+ +S K +
Sbjct: 1097 RWSDYVERYMNSDTTSPELREHLAQKPVFLPRNLRRIRKCQRGREQQEKEGKEGNSKKTM 1156
Query: 1046 VGVESACDVDCRFKLSTHKMVFIVNSEDYMYRRGTLCRAKQVQPLVLLRHHQHFEEWHSR 1105
V+S ++CRFKL+++KMV+++ SEDYMYRR L RA Q V R HQ F+ W +
Sbjct: 1157 ENVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSHERVSKRLHQRFQAWVDK 1216
Query: 1106 WLEDNVTVEAASLVQDWLMGEEDEDMVPCKTLCETVHVHGLPVTRYRVQY 1155
W +++V E A+ WLMGE E +VPC T C+T +H + + +YRV+Y
Sbjct: 1217 WTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSINKYRVKY 1266
Score = 58.9 bits (141), Expect = 3e-08
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 124 LTSQENSHNHGDGAEDFKQQVPYKEDKPQVPL-------ESDSVEFNNAISYVNKIKTRF 176
+ + +SH+H + QV P P+ + ++ +A+SY++++K +F
Sbjct: 78 IAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQRLKVEDALSYLDQVKLQF 137
Query: 177 LDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLP 236
P++Y FL+I+ ++ + ++T G V + V+ LF+G DL+ F FLP
Sbjct: 138 GSQPQVYNDFLDIMKEFKSQSIDTPG----------VISRVSQLFKGHPDLIMGFNTFLP 187
Query: 237 EAKR------SLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSAPA 282
+ + P ++H + H P+ PS SAPA
Sbjct: 188 PGYKIEVQTNDMVNVTTPGQVHQIP--THGIQPQPQPPPQHPSQPSAQSAPA 237
Score = 42.7 bits (99), Expect = 0.002
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 20/127 (15%)
Query: 38 PVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSID--------TPG-----VIR 84
PV A+ Y++++K RF P Y FLEI+ ++ + + TP V
Sbjct: 301 PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA 360
Query: 85 RVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQV 144
+V++LF DL+ F FLP N + + + +S + G K Q+
Sbjct: 361 QVARLFKNQEDLLSEFGQFLP-------DANSSVLLSKTTAEKVDSVRNDHGGTVKKPQL 413
Query: 145 PYKEDKP 151
K +P
Sbjct: 414 NNKPQRP 420
>gi|18426913 drebrin 1 isoform b [Homo sapiens]
Length = 651
Score = 43.1 bits (100), Expect = 0.002
Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 51/211 (24%)
Query: 572 KRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNF---KQNDTKALRSKSLLNEI 628
+R KA +E R Q+ + +EQ E+ Q + KQ +A +K L E
Sbjct: 197 ERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEHRRKQQTLEAEEAKRRLKE- 255
Query: 629 ESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIH 688
+S++ +H+++ E S +E+AAA+I+ Q+ D
Sbjct: 256 QSIFGDHRDEEEETHMKKSESE-----------VEEAAAIIA---------QRPDN---- 291
Query: 689 QLLHQFVPSLFFSQQLDLGASEESADEDRDSP----QGQTTDPSERKKPAPGPHSSPPEE 744
P FF QQ + AS + D SP G D R P P P SP +
Sbjct: 292 -------PREFFKQQ-ERVASASAGSCDVPSPFNHRPGSHLDSHRRMAPTPIPTRSPSDS 343
Query: 745 -----------KGAFGDAPATEQPPLPPPAP 764
+ A + +++ PPLPPP P
Sbjct: 344 STASTPVAEQIERALDEVTSSQPPPLPPPPP 374
>gi|18426915 drebrin 1 isoform a [Homo sapiens]
Length = 649
Score = 43.1 bits (100), Expect = 0.002
Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 51/211 (24%)
Query: 572 KRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNF---KQNDTKALRSKSLLNEI 628
+R KA +E R Q+ + +EQ E+ Q + KQ +A +K L E
Sbjct: 195 ERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEHRRKQQTLEAEEAKRRLKE- 253
Query: 629 ESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIH 688
+S++ +H+++ E S +E+AAA+I+ Q+ D
Sbjct: 254 QSIFGDHRDEEEETHMKKSESE-----------VEEAAAIIA---------QRPDN---- 289
Query: 689 QLLHQFVPSLFFSQQLDLGASEESADEDRDSP----QGQTTDPSERKKPAPGPHSSPPEE 744
P FF QQ + AS + D SP G D R P P P SP +
Sbjct: 290 -------PREFFKQQ-ERVASASAGSCDVPSPFNHRPGSHLDSHRRMAPTPIPTRSPSDS 341
Query: 745 -----------KGAFGDAPATEQPPLPPPAP 764
+ A + +++ PPLPPP P
Sbjct: 342 STASTPVAEQIERALDEVTSSQPPPLPPPPP 372
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 40.4 bits (93), Expect = 0.010
Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 721 QGQTTDPSERKKPAPGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKPLDDVYSL 774
QG T P+ +K P PGP S PE K A G P P PPP KP+ V L
Sbjct: 1240 QGSPT-PTSKKVPLPGPGS--PEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGL 1290
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 38.9 bits (89), Expect = 0.029
Identities = 52/232 (22%), Positives = 93/232 (40%), Gaps = 36/232 (15%)
Query: 554 EIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQ 613
++ + +++P + +L + + + EE +E ++ + R + E+ L+ + Q +
Sbjct: 374 QLQQQQQRDPEAHIKHLLHQRQRRIEEQKEERRRVEEQQRREREQRKLQEKEQQR---RL 430
Query: 614 NDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISYYV 673
D +ALR + + E + ++Q E R + + RQ+ ++ A L S
Sbjct: 431 EDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQ---------RQLQQEHAYLKSLQQ 481
Query: 674 KRQPA-IQKEDQGTIHQLLHQFVPSLFFSQQLDLGASEESAD--------EDRDSPQGQT 724
++Q +QK+ Q QLL L+ G AD E+R Q
Sbjct: 482 QQQQQQLQKQQQ---QQLLPGDRKPLYH-----YGRGMNPADKPAWAREVEERTRMNKQQ 533
Query: 725 TDPSERKKPA------PGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKPLDD 770
P + KP P P +SP G P ++P P PHK L D
Sbjct: 534 NSPLAKSKPGSTGPEPPIPQASPGPP-GPLSQTPPMQRPVEPQEGPHKSLQD 584
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 38.5 bits (88), Expect = 0.038
Identities = 34/178 (19%), Positives = 72/178 (40%), Gaps = 8/178 (4%)
Query: 466 WSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEK 525
W+ + K EE++ E++ E + + IR E ++ M E +EK
Sbjct: 291 WNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEK 350
Query: 526 FRLDDSLGGTSEVIQRRAIYRIY--GDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWRE 583
R + + E RR ++ +K E+ E + + ++ + K E +
Sbjct: 351 MRRQEEMMWEKEEKMRRLEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK 410
Query: 584 AQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSE 641
Q+ K+WR++ + + Q ++ + K R + ++E E + +E + Q E
Sbjct: 411 RQEQEAKMWRQE------EKIREQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQE 462
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 38.5 bits (88), Expect = 0.038
Identities = 34/178 (19%), Positives = 72/178 (40%), Gaps = 8/178 (4%)
Query: 466 WSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEK 525
W+ + K EE++ E++ E + + IR E ++ M E +EK
Sbjct: 352 WNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEK 411
Query: 526 FRLDDSLGGTSEVIQRRAIYRIY--GDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWRE 583
R + + E RR ++ +K E+ E + + ++ + K E +
Sbjct: 412 MRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK 471
Query: 584 AQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSE 641
Q+ K+WR++ + + Q ++ + K R + ++E E + +E + Q E
Sbjct: 472 RQEQEAKMWRQE------EKIREQEEKIREQEEKMWRQEEKIHEQEKIREEEKRQEQE 523
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 37.7 bits (86), Expect = 0.064
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 694 FVPSLFFSQQLDLGASEESADE---DRDSPQGQTTDPSERKKPAPGPHSSPPEEKGAFGD 750
+ L FS + D S+E E D S G+ P K P+S PP K A+ +
Sbjct: 335 YTEKLKFSDEEDGRDSDEEGAEGHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAE 394
Query: 751 ---------APATEQPPLPPP 762
P +PPLPPP
Sbjct: 395 TSRPPETEPGPPAPKPPLPPP 415
Score = 36.2 bits (82), Expect = 0.19
Identities = 19/54 (35%), Positives = 22/54 (40%)
Query: 711 ESADEDRDSPQGQTTDPSERKKPAPGPHSSPPEEKGAFGDAPATEQPPLPPPAP 764
++A + P P K P P PH P G GD P PP PPAP
Sbjct: 389 KTAWAETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDYPDRGGPPCKPPAP 442
Score = 32.0 bits (71), Expect = 3.5
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 23/85 (27%)
Query: 700 FSQQLDLGASEESADEDRDSPQGQTTDPSERKKPAPGPHSSPPEEKGAFGDAPATEQPPL 759
++++L E+ D D + +G R + PPE G G++P +E PP
Sbjct: 335 YTEKLKFSDEEDGRDSDEEGAEGH------RDSQSASGEERPPEADGKKGNSPNSE-PPT 387
Query: 760 P----------------PPAPHKPL 768
P PPAP PL
Sbjct: 388 PKTAWAETSRPPETEPGPPAPKPPL 412
>gi|222537714 taxilin beta [Homo sapiens]
Length = 684
Score = 37.0 bits (84), Expect = 0.11
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 592 WREQYE---KAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPSS 648
W+ ++E KA L ++ +A+ K+ + ++ L N ++ +E E H + R A S
Sbjct: 405 WKARFENCNKALLDMIEEKALRAKEYECFVMKIGRLENLCRALQEERNELHKKIRDAEIS 464
Query: 649 EP-----HLIFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLLH--QFVPSLFFS 701
E H + + D Q A++ + T ++H + P
Sbjct: 465 EKDDQSQHNSDEEPESNVSVDQEIDAEEVNSVQTAVK--NLATAFMIIHHPESTPHQSKE 522
Query: 702 QQLDLGASEESADEDRDSPQGQTTDPSERKKPAPGPHSSPPEEKGAFGDAPATEQPP 758
Q ++G+S+ESAD P+ PS R +P P +P E DA +PP
Sbjct: 523 TQPEIGSSQESADAALKEPEQPPLIPS-RDSESPLPPLTPQAEAEGGSDA----EPP 574
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 37.0 bits (84), Expect = 0.11
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 4 AGGGSGGSGAGGPAGRGLSGARWGRSGSAG 33
+GGGSG G GG AG G G+ G SG+AG
Sbjct: 489 SGGGSGSGGGGGGAGGGGGGSSGGGSGTAG 518
Score = 34.7 bits (78), Expect = 0.54
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 3 HAGGGSGGSGAGGPAGRGLSGARWGRSGSAG 33
H GGGSG GAGG +G G SG+ G G+ G
Sbjct: 475 HRGGGSGSGGAGGGSGGG-SGSGGGGGGAGG 504
Score = 32.7 bits (73), Expect = 2.1
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 4 AGGGSGGSGAGGPAGRGLSGARWGRSGSAG 33
+GG GGSG G +G G GA G GS+G
Sbjct: 482 SGGAGGGSGGGSGSGGGGGGAGGGGGGSSG 511
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 37.0 bits (84), Expect = 0.11
Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 18/160 (11%)
Query: 607 QAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAA 666
Q +N N + ++L I ++ + +Q AP + + E +
Sbjct: 1136 QLLNIHSNPEMQQQLEALNQSISALTEATSQQQDSETMAP-----------EESLKEAPS 1184
Query: 667 ALISYYVKRQPAIQKEDQGTIHQLLHQFVPSLFFSQQLDLGASEESADEDRDSPQGQTTD 726
A + Q ++ Q + + S Q G+ EE+ + PQG
Sbjct: 1185 APVILPSAEQTTLEASSTPADMQNILAVLLSQLMKTQEPAGSLEENNSDKNSGPQGPRRT 1244
Query: 727 PSERKKPAPG--PHSSPPEEKGAFGDAPATEQPPLPPPAP 764
P+ ++ A PH PPE++ P PP PPP P
Sbjct: 1245 PTMPQEEAAACPPHILPPEKR-----PPEPPGPPPPPPPP 1279
>gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]
Length = 1303
Score = 36.6 bits (83), Expect = 0.14
Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 36/230 (15%)
Query: 554 EIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQ 613
++ + +++P + +L + + + EE +E ++ + R + E+ L+ + Q +
Sbjct: 374 QLQQQQQRDPEAHIKHLLHQRQRRIEEQKEERRRVEEQQRREREQRKLQEKEQQR---RL 430
Query: 614 NDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISYYV 673
D +ALR + + E + ++Q E R + + RQ+ ++ A L S
Sbjct: 431 EDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQ---------RQLQQEHAYLKSLQQ 481
Query: 674 KRQPA-IQKEDQGTIHQLLHQFVPSLFFSQQLDLGASEESAD--------EDRDSPQGQT 724
++Q +QK+ Q QLL L+ G AD E+R Q
Sbjct: 482 QQQQQQLQKQQQ---QQLLPGDRKPLYH-----YGRGMNPADKPAWAREVEERTRMNKQQ 533
Query: 725 TDPSERKKPA------PGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKPL 768
P + KP P P +SP G P ++P P PHK L
Sbjct: 534 NSPLAKSKPGSTGPEPPIPQASPGPP-GPLSQTPPMQRPVEPQEGPHKSL 582
>gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens]
Length = 1332
Score = 36.6 bits (83), Expect = 0.14
Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 36/230 (15%)
Query: 554 EIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQ 613
++ + +++P + +L + + + EE +E ++ + R + E+ L+ + Q +
Sbjct: 374 QLQQQQQRDPEAHIKHLLHQRQRRIEEQKEERRRVEEQQRREREQRKLQEKEQQR---RL 430
Query: 614 NDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISYYV 673
D +ALR + + E + ++Q E R + + RQ+ ++ A L S
Sbjct: 431 EDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQ---------RQLQQEHAYLKSLQQ 481
Query: 674 KRQPA-IQKEDQGTIHQLLHQFVPSLFFSQQLDLGASEESAD--------EDRDSPQGQT 724
++Q +QK+ Q QLL L+ G AD E+R Q
Sbjct: 482 QQQQQQLQKQQQ---QQLLPGDRKPLYH-----YGRGMNPADKPAWAREVEERTRMNKQQ 533
Query: 725 TDPSERKKPA------PGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKPL 768
P + KP P P +SP G P ++P P PHK L
Sbjct: 534 NSPLAKSKPGSTGPEPPIPQASPGPP-GPLSQTPPMQRPVEPQEGPHKSL 582
>gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens]
Length = 1295
Score = 36.6 bits (83), Expect = 0.14
Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 36/230 (15%)
Query: 554 EIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQ 613
++ + +++P + +L + + + EE +E ++ + R + E+ L+ + Q +
Sbjct: 374 QLQQQQQRDPEAHIKHLLHQRQRRIEEQKEERRRVEEQQRREREQRKLQEKEQQR---RL 430
Query: 614 NDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPSSEPHLIFVYEDRQILEDAAALISYYV 673
D +ALR + + E + ++Q E R + + RQ+ ++ A L S
Sbjct: 431 EDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQ---------RQLQQEHAYLKSLQQ 481
Query: 674 KRQPA-IQKEDQGTIHQLLHQFVPSLFFSQQLDLGASEESAD--------EDRDSPQGQT 724
++Q +QK+ Q QLL L+ G AD E+R Q
Sbjct: 482 QQQQQQLQKQQQ---QQLLPGDRKPLYH-----YGRGMNPADKPAWAREVEERTRMNKQQ 533
Query: 725 TDPSERKKPA------PGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKPL 768
P + KP P P +SP G P ++P P PHK L
Sbjct: 534 NSPLAKSKPGSTGPEPPIPQASPGPP-GPLSQTPPMQRPVEPQEGPHKSL 582
>gi|62422577 neurobeachin [Homo sapiens]
Length = 2946
Score = 36.6 bits (83), Expect = 0.14
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 4 AGGGSGGSGAGGPAGRGLSGARWGRSGSAGHEKLPVHVEDALTYLDQVKIRF 55
AGGG GGSG GG G G+ R G SGS G LP + + + ++++F
Sbjct: 25 AGGGGGGSGGGGTGGSGMGELR-GASGS-GSVMLPAGMINPSVPIRNIRMKF 74
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 36.6 bits (83), Expect = 0.14
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 19/149 (12%)
Query: 707 GASEESADEDRDSPQGQTTDP-SERKKPAPGPHSSPPEEKGAFGDAPA-----TEQP-PL 759
G ++S + R S + ++ P S PAP P +PP+++ + P T P P
Sbjct: 522 GPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPA 581
Query: 760 PPPAPHKPLDDVYSLFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKEREKLL 819
PP P KP+ A + L + + Q +++ E R + ER+K +
Sbjct: 582 PPVTPSKPMAGTTDREEAT----------RLLAEKRRQAREQREREEQERRLQAERDKRM 631
Query: 820 CEGR--REKGSDPAMELRLKQPSEVELEE 846
E + RE + E ++ E E E
Sbjct: 632 REEQLAREAEARAEREAEARRREEQEARE 660
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 36.2 bits (82), Expect = 0.19
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 2 AHAGGGSGGSGAGGPAGRGLSGARWGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPAT 61
A GGG GG G GG G G+ G G G AG + PV LD +P +
Sbjct: 59 AGGGGGGGGGGGGGGGGGGVGGG--GAGGGAGGGRSPVR------ELDMGAAERSREPGS 110
Query: 62 YNGFLEIMKEFKSQSIDTPGV 82
E+ E K + D G+
Sbjct: 111 PR-LTEVSPELKDRKEDAKGM 130
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 36.2 bits (82), Expect = 0.19
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 5 GGGSGGSGAGGPAGRGLSGARWGRSGSAGHEKL 37
GGG GG G GG GR S + G SG G E +
Sbjct: 55 GGGGGGGGGGGGGGRSSSSSSSGSSGGGGSEAM 87
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 35.8 bits (81), Expect = 0.24
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 708 ASEESADEDRDSPQGQTTDPSERKKPAPGPHSSP-PEEKGAFGDAPATEQPPLPPPAPHK 766
A +E A+ ++P P+ R +PA P +P P G GD PA P P P
Sbjct: 570 AGDEPAESPSETPGPSPAGPT-RDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAG 628
Query: 767 PLDD 770
P D
Sbjct: 629 PAGD 632
Score = 33.9 bits (76), Expect = 0.92
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 708 ASEESADEDRDSPQGQTTDPSERKKPAPGPHSSP-PEEKGAFGDAPATEQPPLPPPAPHK 766
A +E A+ ++P + P+ +PA P +P P G GD PA P P+P
Sbjct: 530 AGDEPAESPSETPGPRPAGPAG-DEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAG 588
Query: 767 PLDD 770
P D
Sbjct: 589 PTRD 592
Score = 33.5 bits (75), Expect = 1.2
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 15/79 (18%)
Query: 707 GASEESADEDRDS----PQGQTTDPSERKKPAPG------PHSSP-----PEEKGAFGDA 751
G SE +ED + +G PSE P+P P SP P G GD
Sbjct: 494 GHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDE 553
Query: 752 PATEQPPLPPPAPHKPLDD 770
PA P P P P D
Sbjct: 554 PAESPSETPGPRPAGPAGD 572
Score = 32.3 bits (72), Expect = 2.7
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 710 EESADEDRDSPQGQTTDPSERKKPAPGPHSSP-PEEKGAFGDAPATEQPPLPPPAPHKPL 768
+E A+ ++P + P+ +PA P +P P G GD PA P P+P P
Sbjct: 592 DEPAESPSETPGPRPAGPAG-DEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPT 650
Query: 769 DD 770
D
Sbjct: 651 RD 652
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 35.8 bits (81), Expect = 0.24
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 3 HAGGGSGGSGAGGPAGRGLSGARWGRSGSAGHEKLP 38
H+GGG GG G+GG G G SG SG +GH P
Sbjct: 2290 HSGGGGGG-GSGGSGGGGGSGGGGAPSGGSGHSGGP 2324
>gi|239753043 PREDICTED: hypothetical protein [Homo sapiens]
Length = 451
Score = 35.4 bits (80), Expect = 0.32
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 17/83 (20%)
Query: 684 QGTIH---QLLHQFVPSL--FFSQQLDLGASEESADEDRDSPQGQTTDPSERKKPAPGPH 738
+GT H +L Q++ L F SQ+L SP G T P K APGPH
Sbjct: 353 EGTRHNDIELYSQYLEGLRRFISQELPAS-----------SPSGGTNRPDLSNKAAPGPH 401
Query: 739 SSPPEEKGAFGDAPATEQPPLPP 761
+P + G D A + PL P
Sbjct: 402 PAPAPQ-GLHVDPRAAQGTPLQP 423
>gi|21070967 neurexin 1 isoform beta precursor [Homo sapiens]
Length = 442
Score = 35.4 bits (80), Expect = 0.32
Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 28/81 (34%)
Query: 5 GGGSGGSGAGGPAGR------------GLSGARWGRS-----------GSAGHEKLPVHV 41
GGG GG G GG GR GL G WG S GS+ H +P+ +
Sbjct: 16 GGGGGGGGGGGAGGRLALLWIVPLTLSGLLGVAWGASSLGAHHIHHFHGSSKHHSVPIAI 75
Query: 42 EDALTYLDQVKIRFGSDPATY 62
Y +R G TY
Sbjct: 76 -----YRSPASLRGGHAGTTY 91
>gi|225637562 NIMA-related kinase 11 isoform 3 [Homo sapiens]
Length = 599
Score = 35.4 bits (80), Expect = 0.32
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 27/135 (20%)
Query: 571 LKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIES 630
L++L+A +E+ R+ + KI E+YE+ + + ++ NF+Q L K+ L +E
Sbjct: 347 LRKLQAADEKARKLK----KIVEEKYEENSKRMQELRSRNFQQLSVDVLHEKTHLKGMEE 402
Query: 631 VYD-----------EHQEQHSEGRSAPSSEPHL-----------IFVYEDRQILEDAAAL 668
+ + E+ +GR S EP L + ++E I+EDA +
Sbjct: 403 KEEQPEGRLSCSPQDEDEERWQGREEESDEPTLENLPESQPIPSMDLHELESIVEDATSD 462
Query: 669 ISYY-VKRQPAIQKE 682
+ Y+ + P + +E
Sbjct: 463 LGYHEIPEDPLVAEE 477
>gi|225637560 NIMA-related kinase 11 isoform 1 [Homo sapiens]
Length = 645
Score = 35.4 bits (80), Expect = 0.32
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 27/135 (20%)
Query: 571 LKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIES 630
L++L+A +E+ R+ + KI E+YE+ + + ++ NF+Q L K+ L +E
Sbjct: 347 LRKLQAADEKARKLK----KIVEEKYEENSKRMQELRSRNFQQLSVDVLHEKTHLKGMEE 402
Query: 631 VYD-----------EHQEQHSEGRSAPSSEPHL-----------IFVYEDRQILEDAAAL 668
+ + E+ +GR S EP L + ++E I+EDA +
Sbjct: 403 KEEQPEGRLSCSPQDEDEERWQGREEESDEPTLENLPESQPIPSMDLHELESIVEDATSD 462
Query: 669 ISYY-VKRQPAIQKE 682
+ Y+ + P + +E
Sbjct: 463 LGYHEIPEDPLVAEE 477
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 35.4 bits (80), Expect = 0.32
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 720 PQGQTTDPSERKKPAPGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKP 767
P Q P + +PAP P PP+++ P +QPP PPP +P
Sbjct: 1655 PPQQPQPPPPQPQPAPQP--PPPQQQPQQQPQPQPQQPPPPPPPQQQP 1700
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 35.4 bits (80), Expect = 0.32
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 720 PQGQTTDPSERKKPAPGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKP 767
P Q P + +PAP P PP+++ P +QPP PPP +P
Sbjct: 1655 PPQQPQPPPPQPQPAPQP--PPPQQQPQQQPQPQPQQPPPPPPPQQQP 1700
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 35.4 bits (80), Expect = 0.32
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 720 PQGQTTDPSERKKPAPGPHSSPPEEKGAFGDAPATEQPPLPPPAPHKP 767
P Q P + +PAP P PP+++ P +QPP PPP +P
Sbjct: 1655 PPQQPQPPPPQPQPAPQP--PPPQQQPQQQPQPQPQQPPPPPPPQQQP 1700
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,016,484
Number of Sequences: 37866
Number of extensions: 2411465
Number of successful extensions: 19458
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 211
Number of HSP's that attempted gapping in prelim test: 17079
Number of HSP's gapped (non-prelim): 2128
length of query: 1162
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1049
effective length of database: 13,968,660
effective search space: 14653124340
effective search space used: 14653124340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.