Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DBN1 Sequence: fasta or formatted (649aa) NCBI GI: 18426915
Description:

drebrin 1 isoform a

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [651aa] drebrin 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         75           3
 C cysteine            1.2          8           1
 D aspartate           5.4         35           2
 E glutamate          15.3         99           4
 F phenylalanine       2.8         18           2
 G glycine             5.2         34           2
 H histidine           1.8         12           1
 I isoleucine          2.8         18           2
 K lysine              3.4         22           2
 L leucine             6.9         45           2
 M methionine          1.4          9           1
 N asparagine          2.2         14           2
 P proline             9.7         63           6
 Q glutamine           5.7         37           2
 R arginine            5.7         37           2
 S serine              6.5         42           2
 T threonine           5.4         35           2
 V valine              4.8         31           1
 W tryptophan          0.9          6           1
 Y tyrosine            1.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   drebrin 1 isoform a 
DBN1                  0.956   drebrin 1 isoform b 
DBNL                  0.151   drebrin-like isoform c 
DBNL                  0.148   drebrin-like isoform b 
DBNL                  0.147   drebrin-like isoform a 
ENAH                  0.053   enabled homolog isoform a 
ENAH                  0.053   enabled homolog isoform b 
NEFH                  0.036   neurofilament, heavy polypeptide 200kDa 
MAP4K4                0.035   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.033   mitogen-activated protein kinase kinase kinase kinas...
INCENP                0.033   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.033   inner centromere protein antigens 135/155kDa isofor...
GIGYF2                0.033   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.033   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.033   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.033   GRB10 interacting GYF protein 2 isoform b 
RBM25                 0.032   RNA binding motif protein 25 
MAP4K4                0.031   mitogen-activated protein kinase kinase kinase kinas...
BAT2D1                0.031   HBxAg transactivated protein 2 
LOC651807             0.031   PREDICTED: hypothetical protein 
LOC100133220          0.031   PREDICTED: hypothetical protein 
SETD1A                0.031   SET domain containing 1A 
FSCB                  0.031   fibrous sheath CABYR binding protein 
GOLGA6B               0.030   golgi autoantigen, golgin subfamily a, 6B 
GOLGA6D               0.030   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.030   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
TCHH                  0.030   trichohyalin 
LOC440243             0.030   PREDICTED: Putative golgin subfamily A member 6-lik...
PELP1                 0.030   proline, glutamic acid and leucine rich protein 1 [...
GOLGA6                0.030   golgi autoantigen, golgin subfamily a, 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press