CHMP1A 3294

Name: CHMP1A	Sequence: fasta or formatted (240aa)		NCBI GI: 134019487
Description: chromatin modifying protein 1A isoform 1		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [196aa] chromatin modifying protein 1A isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.5 30 2 C cysteine 5.0 12 1 D aspartate 5.0 12 1 E glutamate 9.6 23 2 F phenylalanine 0.0 0 0 G glycine 17.5 42 2 H histidine 4.2 10 2 I isoleucine 0.4 1 1 K lysine 0.4 1 1 L leucine 7.5 18 2 M methionine 0.4 1 1 N asparagine 0.0 0 0 P proline 11.7 28 2 Q glutamine 5.0 12 1 R arginine 9.6 23 3 S serine 4.2 10 1 T threonine 1.2 3 1 V valine 3.8 9 1 W tryptophan 0.8 2 1 Y tyrosine 1.2 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromatin modifying protein 1A isoform 1 LOC100131851 0.038 PREDICTED: hypothetical protein HRNR 0.038 hornerin LOC100131851 0.036 PREDICTED: hypothetical protein LOC100130751 0.036 PREDICTED: hypothetical protein COL3A1 0.036 collagen type III alpha 1 preproprotein RPGR 0.032 retinitis pigmentosa GTPase regulator isoform C [Hom... EN2 0.030 engrailed homeobox 2 MICALL1 0.030 molecule interacting with Rab13 MAF 0.028 v-maf musculoaponeurotic fibrosarcoma oncogene homol... MAF 0.028 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... HNRNPU 0.026 heterogeneous nuclear ribonucleoprotein U isoform a ... LOC100132713 0.026 PREDICTED: similar to hCG1654128 WDR33 0.026 WD repeat domain 33 isoform 1 COL6A2 0.024 alpha 2 type VI collagen isoform 2C2a' precursor [H... COL6A2 0.024 alpha 2 type VI collagen isoform 2C2a precursor [Ho... COL6A2 0.024 alpha 2 type VI collagen isoform 2C2 precursor [Hom... MNX1 0.024 homeo box HB9 EXOSC6 0.024 homolog of yeast mRNA transport regulator 3 KHSRP 0.024 KH-type splicing regulatory protein COL27A1 0.024 collagen, type XXVII, alpha 1 MAP3K12 0.022 mitogen-activated protein kinase kinase kinase 12 [H... LOC100132713 0.022 PREDICTED: similar to hCG1654128 RYR1 0.022 skeletal muscle ryanodine receptor isoform 2 RYR1 0.022 skeletal muscle ryanodine receptor isoform 1 COL1A1 0.022 alpha 1 type I collagen preproprotein COL5A2 0.022 alpha 2 type V collagen preproprotein PRDM8 0.022 PR domain containing 8 PRDM8 0.022 PR domain containing 8 LOC100132713 0.020 PREDICTED: similar to hCG1654128 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.